RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 USP20Q9Y2K6 914 aa17.05■□□□□ 0.32
HERPUD1-201ENST00000300302 NRCAMQ92823 1304 aa17.05■□□□□ 0.32
HERPUD1-201ENST00000300302 PLEKP08567 350 aaPredicted RBP17.04■□□□□ 0.32
HERPUD1-201ENST00000300302 DLATP10515 647 aaKnown RBP17.04■□□□□ 0.32
HERPUD1-201ENST00000300302 JAM2P57087 298 aa17.04■□□□□ 0.32
HERPUD1-201ENST00000300302 CAP1Q01518 475 aa17.04■□□□□ 0.32
HERPUD1-201ENST00000300302 KLHL30Q0D2K2 578 aa17.04■□□□□ 0.32
HERPUD1-201ENST00000300302 PRPF4BQ13523 1007 aaKnown RBP17.04■□□□□ 0.32
HERPUD1-201ENST00000300302 PSMD6Q15008 389 aa17.04■□□□□ 0.32
HERPUD1-201ENST00000300302 KIAA0753Q2KHM9 967 aa17.04■□□□□ 0.32
HERPUD1-201ENST00000300302 HGSNATQ68CP4 663 aa17.04■□□□□ 0.32
HERPUD1-201ENST00000300302 IQCEQ6IPM2 695 aa17.04■□□□□ 0.32
HERPUD1-201ENST00000300302 KIAA1328Q86T90 577 aa17.04■□□□□ 0.32
HERPUD1-201ENST00000300302 LMO3Q8TAP4 145 aa17.04■□□□□ 0.32
HERPUD1-201ENST00000300302 STK33Q9BYT3 514 aa17.04■□□□□ 0.32
HERPUD1-201ENST00000300302 PRMT7Q9NVM4 692 aaPredicted RBP17.04■□□□□ 0.32
HERPUD1-201ENST00000300302 KIF5CO60282 957 aa17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 ZEB2O60315 1214 aa17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 EDN1P05305 212 aa17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 STAT1P42224 750 aa17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 ACOT2P49753 483 aa17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 FLT3LGP49771 235 aa17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 NLRP11P59045 1033 aaKnown RBP17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 SP3Q02447 781 aa17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 MAP2K1Q02750 393 aaPredicted RBP17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 MFSD10Q14728 455 aa17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 TMEM132AQ24JP5 1023 aa17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 MARCH8Q5T0T0 291 aa17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 SYT10Q6XYQ8 523 aa17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 TSHZ1Q6ZSZ6 1077 aa17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 IFNLR1Q8IU57 520 aaPredicted RBP17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 LENG1Q96BZ8 264 aaPredicted RBP17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 KATNAL1Q9BW62 490 aa17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 HAPLN2Q9GZV7 340 aa17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 RBAKQ9NYW8 714 aaPredicted RBP17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 DNAJC12Q9UKB3 198 aa17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 REXO2Q9Y3B8 237 aaKnown RBP17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 EVPLQ92817 2033 aa17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 DUSP11O75319 330 aaKnown RBP17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 LCA5LO95447 670 aa17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 CCDC172P0C7W6 258 aa17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 SMIM10L2AP0DMW4 78 aa17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 SMIM10L2BP0DMW5 78 aa17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 CHMP4BP1P59074 171 aa17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 GNG11P61952 73 aa17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 CLDN10P78369 228 aa17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 CDC42EP1Q00587 391 aa17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 ARID5AQ03989 594 aa17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 MBTD1Q05BQ5 628 aa17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 ZNF662Q6ZS27 426 aa17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 TXLNBQ8N3L3 684 aa17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 POP1Q99575 1024 aaKnown RBP17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 HAUS4Q9H6D7 363 aa17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 IFT122Q9HBG6 1241 aa17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 SETD4Q9NVD3 440 aa17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 DNAI1Q9UI46 699 aa17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 GABRQQ9UN88 632 aa17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 COQ4Q9Y3A0 265 aa17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 ZSWIM8A7E2V4 1837 aa17.03■□□□□ 0.32
HERPUD1-201ENST00000300302 MYL3P08590 195 aa17.02■□□□□ 0.32
HERPUD1-201ENST00000300302 FERP16591 822 aa17.02■□□□□ 0.32
HERPUD1-201ENST00000300302 TERF1P54274 439 aa17.02■□□□□ 0.32
HERPUD1-201ENST00000300302 MCL1Q07820 350 aa17.02■□□□□ 0.32
HERPUD1-201ENST00000300302 FSCN1Q16658 493 aaKnown RBP17.02■□□□□ 0.32
HERPUD1-201ENST00000300302 FAM187BQ17R55 369 aa17.02■□□□□ 0.32
HERPUD1-201ENST00000300302 ATF7IP2Q5U623 682 aa17.02■□□□□ 0.32
HERPUD1-201ENST00000300302 NFRKBQ6P4R8 1299 aa17.02■□□□□ 0.32
HERPUD1-201ENST00000300302 GJB7Q6PEY0 223 aa17.02■□□□□ 0.32
HERPUD1-201ENST00000300302 MPZL3Q6UWV2 235 aa17.02■□□□□ 0.32
HERPUD1-201ENST00000300302 CRELD2Q6UXH1 353 aaPredicted RBP17.02■□□□□ 0.32
HERPUD1-201ENST00000300302 FBXL13Q8NEE6 735 aa17.02■□□□□ 0.32
HERPUD1-201ENST00000300302 LMBR1Q8WVP7 490 aa17.02■□□□□ 0.32
HERPUD1-201ENST00000300302 TRIB2Q92519 343 aa17.02■□□□□ 0.32
HERPUD1-201ENST00000300302 KAT2BQ92831 832 aa17.02■□□□□ 0.32
HERPUD1-201ENST00000300302 LUC7LQ9NQ29 371 aaKnown RBP17.02■□□□□ 0.32
HERPUD1-201ENST00000300302 KAT6AQ92794 2004 aa17.02■□□□□ 0.32
HERPUD1-201ENST00000300302 A0A087WZ62 844 aa17.01■□□□□ 0.31
HERPUD1-201ENST00000300302 F8VZ95 297 aa17.01■□□□□ 0.31
HERPUD1-201ENST00000300302 OGTO15294 1046 aa17.01■□□□□ 0.31
HERPUD1-201ENST00000300302 KRT86O43790 486 aa17.01■□□□□ 0.31
HERPUD1-201ENST00000300302 KPNA6O60684 536 aa17.01■□□□□ 0.31
HERPUD1-201ENST00000300302 VTNP04004 478 aa17.01■□□□□ 0.31
HERPUD1-201ENST00000300302 HARSP12081 509 aaKnown RBP17.01■□□□□ 0.31
HERPUD1-201ENST00000300302 CYBAP13498 195 aa17.01■□□□□ 0.31
HERPUD1-201ENST00000300302 TNNI1P19237 187 aa17.01■□□□□ 0.31
HERPUD1-201ENST00000300302 ANXA13P27216 316 aa17.01■□□□□ 0.31
HERPUD1-201ENST00000300302 SOX5P35711 763 aa17.01■□□□□ 0.31
HERPUD1-201ENST00000300302 PRKCIP41743 596 aa17.01■□□□□ 0.31
HERPUD1-201ENST00000300302 PSEN2P49810 448 aa17.01■□□□□ 0.31
HERPUD1-201ENST00000300302 PRKCZQ05513 592 aa17.01■□□□□ 0.31
HERPUD1-201ENST00000300302 ASTE1Q2TB18 679 aaPredicted RBP17.01■□□□□ 0.31
HERPUD1-201ENST00000300302 PHLDB3Q6NSJ2 640 aa17.01■□□□□ 0.31
HERPUD1-201ENST00000300302 SV2AQ7L0J3 742 aa17.01■□□□□ 0.31
HERPUD1-201ENST00000300302 IRF2BP2Q7Z5L9 587 aa17.01■□□□□ 0.31
HERPUD1-201ENST00000300302 ZBTB33Q86T24 672 aa17.01■□□□□ 0.31
HERPUD1-201ENST00000300302 ZNF410Q86VK4 478 aa17.01■□□□□ 0.31
HERPUD1-201ENST00000300302 NLRP7Q8WX94 980 aa17.01■□□□□ 0.31
HERPUD1-201ENST00000300302 ZNF668Q96K58 619 aaPredicted RBP17.01■□□□□ 0.31
HERPUD1-201ENST00000300302 SCLT1Q96NL6 688 aa17.01■□□□□ 0.31
HERPUD1-201ENST00000300302 FDXACB1Q9BRP7 624 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms