RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 ITIH3Q06033 890 aa14.2□□□□□ -0.14
CASC4-201ENST00000299957 ORC1Q13415 861 aa14.2□□□□□ -0.14
CASC4-201ENST00000299957 KRT81Q14533 505 aa14.2□□□□□ -0.14
CASC4-201ENST00000299957 NGRNQ9NPE2 291 aaKnown RBP14.2□□□□□ -0.14
CASC4-201ENST00000299957 CTNNAL1Q9UBT7 734 aa14.2□□□□□ -0.14
CASC4-201ENST00000299957 DLG4P78352 724 aa14.2□□□□□ -0.14
CASC4-201ENST00000299957 PPATQ06203 517 aa14.2□□□□□ -0.14
CASC4-201ENST00000299957 PDIA2Q13087 525 aaKnown RBP14.2□□□□□ -0.14
CASC4-201ENST00000299957 TSNAXIP1Q2TAA8 658 aa14.2□□□□□ -0.14
CASC4-201ENST00000299957 LLGL2Q6P1M3 1020 aa14.2□□□□□ -0.14
CASC4-201ENST00000299957 SDCCAG8Q86SQ7 713 aaPredicted RBP14.2□□□□□ -0.14
CASC4-201ENST00000299957 NCAPG2Q86XI2 1143 aa14.2□□□□□ -0.14
CASC4-201ENST00000299957 PRMT6Q96LA8 375 aaPredicted RBP14.2□□□□□ -0.14
CASC4-201ENST00000299957 MSTO1Q9BUK6 570 aa14.2□□□□□ -0.14
CASC4-201ENST00000299957 SLC13A1Q9BZW2 595 aa14.2□□□□□ -0.14
CASC4-201ENST00000299957 E2F8A0AVK6 867 aa14.19□□□□□ -0.14
CASC4-201ENST00000299957 I3L4J1 428 aa14.19□□□□□ -0.14
CASC4-201ENST00000299957 SHMT1P34896 483 aa14.19□□□□□ -0.14
CASC4-201ENST00000299957 SNRNP35Q16560 246 aaKnown RBP14.19□□□□□ -0.14
CASC4-201ENST00000299957 KRT39Q6A163 491 aa14.19□□□□□ -0.14
CASC4-201ENST00000299957 PLEKHG2Q9H7P9 1386 aa14.19□□□□□ -0.14
CASC4-201ENST00000299957 ENO4A6NNW6 628 aa14.19□□□□□ -0.14
CASC4-201ENST00000299957 F8VZ95 297 aa14.19□□□□□ -0.14
CASC4-201ENST00000299957 RNF8O76064 485 aa14.19□□□□□ -0.14
CASC4-201ENST00000299957 YWHABP31946 246 aaKnown RBP14.19□□□□□ -0.14
CASC4-201ENST00000299957 RASSF2P50749 326 aa14.19□□□□□ -0.14
CASC4-201ENST00000299957 ITGA8P53708 1063 aa14.19□□□□□ -0.14
CASC4-201ENST00000299957 SPOPLQ6IQ16 392 aa14.19□□□□□ -0.14
CASC4-201ENST00000299957 YARSP54577 528 aaKnown RBP14.19□□□□□ -0.14
CASC4-201ENST00000299957 MAPK7Q13164 816 aa14.19□□□□□ -0.14
CASC4-201ENST00000299957 P3H1Q32P28 736 aa14.19□□□□□ -0.14
CASC4-201ENST00000299957 PALB2Q86YC2 1186 aa14.19□□□□□ -0.14
CASC4-201ENST00000299957 FBXL13Q8NEE6 735 aa14.19□□□□□ -0.14
CASC4-201ENST00000299957 MAIP1Q8WWC4 291 aa14.19□□□□□ -0.14
CASC4-201ENST00000299957 ERP27Q96DN0 273 aa14.19□□□□□ -0.14
CASC4-201ENST00000299957 RBM15Q96T37 977 aaKnown RBP eCLIP14.19□□□□□ -0.148e-6■■■■■ 30.1
CASC4-201ENST00000299957 ESYT2A0FGR8 921 aa14.18□□□□□ -0.14
CASC4-201ENST00000299957 MT-ND3P03897 115 aa14.18□□□□□ -0.14
CASC4-201ENST00000299957 P4HBP07237 508 aaKnown RBP14.18□□□□□ -0.14
CASC4-201ENST00000299957 RALAP11233 206 aa14.18□□□□□ -0.14
CASC4-201ENST00000299957 CPA2P48052 419 aa14.18□□□□□ -0.14
CASC4-201ENST00000299957 ARSEP51690 589 aa14.18□□□□□ -0.14
CASC4-201ENST00000299957 GNPTABQ3T906 1256 aa14.18□□□□□ -0.14
CASC4-201ENST00000299957 TRPM8Q7Z2W7 1104 aa14.18□□□□□ -0.14
CASC4-201ENST00000299957 DCLK2Q8N568 766 aa14.18□□□□□ -0.14
CASC4-201ENST00000299957 NCAPGQ9BPX3 1015 aa14.18□□□□□ -0.14
CASC4-201ENST00000299957 C10orf88Q9H8K7 445 aa14.18□□□□□ -0.14
CASC4-201ENST00000299957 IGF2BP3O00425 579 aaKnown RBP eCLIP14.18□□□□□ -0.14
CASC4-201ENST00000299957 PPP1R11O60927 126 aaPredicted RBP14.18□□□□□ -0.14
CASC4-201ENST00000299957 GRAP2O75791 330 aa14.18□□□□□ -0.14
CASC4-201ENST00000299957 PYGMP11217 842 aa14.18□□□□□ -0.14
CASC4-201ENST00000299957 PRLRP16471 622 aa14.18□□□□□ -0.14
CASC4-201ENST00000299957 SCTRP47872 440 aa14.18□□□□□ -0.14
CASC4-201ENST00000299957 NOP14P78316 857 aaKnown RBP14.18□□□□□ -0.14
CASC4-201ENST00000299957 GRM1Q13255 1194 aa14.18□□□□□ -0.14
CASC4-201ENST00000299957 QPCTQ16769 361 aa14.18□□□□□ -0.14
CASC4-201ENST00000299957 AGR3Q8TD06 166 aa14.18□□□□□ -0.14
CASC4-201ENST00000299957 SLC5A5Q92911 643 aa14.18□□□□□ -0.14
CASC4-201ENST00000299957 SPDL1Q96EA4 605 aa14.18□□□□□ -0.14
CASC4-201ENST00000299957 NEUROG2Q9H2A3 272 aa14.18□□□□□ -0.14
CASC4-201ENST00000299957 SMYD2Q9NRG4 433 aa14.18□□□□□ -0.14
CASC4-201ENST00000299957 KCNH7Q9NS40 1196 aa14.18□□□□□ -0.14
CASC4-201ENST00000299957 NPR1P16066 1061 aa14.18□□□□□ -0.14
CASC4-201ENST00000299957 RHBDL3P58872 404 aa14.18□□□□□ -0.14
CASC4-201ENST00000299957 CDK17Q00537 523 aa14.18□□□□□ -0.14
CASC4-201ENST00000299957 IFRD2Q12894 506 aaPredicted RBP14.18□□□□□ -0.14
CASC4-201ENST00000299957 FAM149B1Q96BN6 582 aa14.18□□□□□ -0.14
CASC4-201ENST00000299957 UNC45AQ9H3U1 944 aa14.18□□□□□ -0.14
CASC4-201ENST00000299957 SUCLA2Q9P2R7 463 aaPredicted RBP14.18□□□□□ -0.14
CASC4-201ENST00000299957 CCT8L1PA6NM43 557 aa14.17□□□□□ -0.14
CASC4-201ENST00000299957 PHF2O75151 1096 aa14.17□□□□□ -0.14
CASC4-201ENST00000299957 POLE2P56282 527 aa14.17□□□□□ -0.14
CASC4-201ENST00000299957 LRRC36Q1X8D7 754 aa14.17□□□□□ -0.14
CASC4-201ENST00000299957 SLC27A3Q5K4L6 730 aa14.17□□□□□ -0.14
CASC4-201ENST00000299957 DARS2Q6PI48 645 aaKnown RBP14.17□□□□□ -0.14
CASC4-201ENST00000299957 KCTD6Q8NC69 237 aa14.17□□□□□ -0.14
CASC4-201ENST00000299957 TAS1R2Q8TE23 839 aa14.17□□□□□ -0.14
CASC4-201ENST00000299957 LRRC37BQ96QE4 947 aa14.17□□□□□ -0.14
CASC4-201ENST00000299957 PURBQ96QR8 312 aaKnown RBP14.17□□□□□ -0.14
CASC4-201ENST00000299957 PABPC3Q9H361 631 aaKnown RBP14.17□□□□□ -0.14
CASC4-201ENST00000299957 CIB2O75838 187 aa14.17□□□□□ -0.14
CASC4-201ENST00000299957 UBOX5O94941 541 aa14.17□□□□□ -0.14
CASC4-201ENST00000299957 TMEM253P0C7T8 217 aa14.17□□□□□ -0.14
CASC4-201ENST00000299957 HSPA6P17066 643 aa14.17□□□□□ -0.14
CASC4-201ENST00000299957 GNA15P30679 374 aa14.17□□□□□ -0.14
CASC4-201ENST00000299957 PSMC4P43686 418 aa14.17□□□□□ -0.14
CASC4-201ENST00000299957 KCNT1Q5JUK3 1230 aa14.17□□□□□ -0.14
CASC4-201ENST00000299957 PODNQ7Z5L7 613 aa14.17□□□□□ -0.14
CASC4-201ENST00000299957 ARHGEF19Q8IW93 802 aa14.17□□□□□ -0.14
CASC4-201ENST00000299957 ATP6V0A1Q93050 837 aa14.17□□□□□ -0.14
CASC4-201ENST00000299957 NPHS2Q9NP85 383 aa14.17□□□□□ -0.14
CASC4-201ENST00000299957 NFAT5O94916 1531 aa14.17□□□□□ -0.14
CASC4-201ENST00000299957 XRN1Q8IZH2 1706 aaKnown RBP14.17□□□□□ -0.14
CASC4-201ENST00000299957 RASSF10A6NK89 507 aa14.17□□□□□ -0.14
CASC4-201ENST00000299957 SMIM24O75264 130 aa14.17□□□□□ -0.14
CASC4-201ENST00000299957 TOM1L1O75674 476 aa14.17□□□□□ -0.14
CASC4-201ENST00000299957 PSMA2P25787 234 aa14.17□□□□□ -0.14
CASC4-201ENST00000299957 HGSNATQ68CP4 663 aa14.17□□□□□ -0.14
CASC4-201ENST00000299957 SPATA21Q7Z572 469 aa14.17□□□□□ -0.14
CASC4-201ENST00000299957 TMC3Q7Z5M5 1100 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms