RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 AGPAT1Q99943 283 aa13.94□□□□□ -0.18
TVP23A-201ENST00000299866 METTL5Q9NRN9 209 aaKnown RBP13.94□□□□□ -0.18
TVP23A-201ENST00000299866 PHTF1Q9UMS5 762 aa13.94□□□□□ -0.18
TVP23A-201ENST00000299866 RASA4BC9J798 803 aa13.94□□□□□ -0.18
TVP23A-201ENST00000299866 RASA4O43374 803 aa13.94□□□□□ -0.18
TVP23A-201ENST00000299866 RAD21O60216 631 aa13.94□□□□□ -0.18
TVP23A-201ENST00000299866 TOM1O60784 492 aa13.94□□□□□ -0.18
TVP23A-201ENST00000299866 PPP1R11O60927 126 aaPredicted RBP13.94□□□□□ -0.18
TVP23A-201ENST00000299866 TBCAO75347 108 aaKnown RBP13.94□□□□□ -0.18
TVP23A-201ENST00000299866 CNGA1P29973 690 aa13.94□□□□□ -0.18
TVP23A-201ENST00000299866 WDR4P57081 412 aaKnown RBP13.94□□□□□ -0.18
TVP23A-201ENST00000299866 RCN2Q14257 317 aa13.94□□□□□ -0.18
TVP23A-201ENST00000299866 COG2Q14746 738 aa13.94□□□□□ -0.18
TVP23A-201ENST00000299866 KIAA0825Q8IV33 1275 aa13.94□□□□□ -0.18
TVP23A-201ENST00000299866 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.94□□□□□ -0.18
TVP23A-201ENST00000299866 MRRFQ96E11 262 aaKnown RBP13.94□□□□□ -0.18
TVP23A-201ENST00000299866 C9orf72Q96LT7 481 aa13.94□□□□□ -0.18
TVP23A-201ENST00000299866 ADAM33Q9BZ11 813 aa13.94□□□□□ -0.18
TVP23A-201ENST00000299866 GPR88Q9GZN0 384 aa13.94□□□□□ -0.18
TVP23A-201ENST00000299866 INTS2Q9H0H0 1204 aaKnown RBP13.94□□□□□ -0.18
TVP23A-201ENST00000299866 VCXQ9H320 206 aa13.94□□□□□ -0.18
TVP23A-201ENST00000299866 DNAJC18Q9H819 358 aa13.94□□□□□ -0.18
TVP23A-201ENST00000299866 PSTPIP2Q9H939 334 aa13.94□□□□□ -0.18
TVP23A-201ENST00000299866 ATP8B3O60423 1300 aa13.93□□□□□ -0.18
TVP23A-201ENST00000299866 GSTTP1A0A1W2PQM5 241 aa13.93□□□□□ -0.18
TVP23A-201ENST00000299866 NVLO15381 856 aaKnown RBP13.93□□□□□ -0.18
TVP23A-201ENST00000299866 ITGA8P53708 1063 aa13.93□□□□□ -0.18
TVP23A-201ENST00000299866 RPS8P62241 208 aaKnown RBP13.93□□□□□ -0.18
TVP23A-201ENST00000299866 ZC2HC1CQ53FD0 456 aaPredicted RBP13.93□□□□□ -0.18
TVP23A-201ENST00000299866 NSMFQ6X4W1 530 aa13.93□□□□□ -0.18
TVP23A-201ENST00000299866 PHC3Q8NDX5 983 aa13.93□□□□□ -0.18
TVP23A-201ENST00000299866 LRRC8CQ8TDW0 803 aa13.93□□□□□ -0.18
TVP23A-201ENST00000299866 GRAMD1AQ96CP6 724 aa13.93□□□□□ -0.18
TVP23A-201ENST00000299866 SLC7A6OSQ96CW6 309 aaPredicted RBP13.93□□□□□ -0.18
TVP23A-201ENST00000299866 USH1CQ9Y6N9 552 aa13.93□□□□□ -0.18
TVP23A-201ENST00000299866 ATP5HO75947 161 aa13.93□□□□□ -0.18
TVP23A-201ENST00000299866 T-ENOLP0DO92 83 aa13.93□□□□□ -0.18
TVP23A-201ENST00000299866 NMT1P30419 496 aaKnown RBP13.93□□□□□ -0.18
TVP23A-201ENST00000299866 GCLCP48506 637 aaPredicted RBP13.93□□□□□ -0.18
TVP23A-201ENST00000299866 CCDC15Q0P6D6 951 aa13.93□□□□□ -0.18
TVP23A-201ENST00000299866 LAMB3Q13751 1172 aa13.93□□□□□ -0.18
TVP23A-201ENST00000299866 LBRQ14739 615 aaKnown RBP13.93□□□□□ -0.18
TVP23A-201ENST00000299866 RFWD3Q6PCD5 774 aa13.93□□□□□ -0.18
TVP23A-201ENST00000299866 NMRK1Q9NWW6 199 aa13.93□□□□□ -0.18
TVP23A-201ENST00000299866 NINJ2Q9NZG7 142 aa13.93□□□□□ -0.18
TVP23A-201ENST00000299866 WDR35Q9P2L0 1181 aa13.93□□□□□ -0.18
TVP23A-201ENST00000299866 NHSL1Q5SYE7 1610 aa13.93□□□□□ -0.18
TVP23A-201ENST00000299866 BCL9O00512 1426 aa13.93□□□□□ -0.18
TVP23A-201ENST00000299866 E7ENQ6 273 aa13.92□□□□□ -0.18
TVP23A-201ENST00000299866 ACADSP16219 412 aa13.92□□□□□ -0.18
TVP23A-201ENST00000299866 PSMC2P35998 433 aaKnown RBP13.92□□□□□ -0.18
TVP23A-201ENST00000299866 ACVR2BQ13705 512 aa13.92□□□□□ -0.18
TVP23A-201ENST00000299866 SGO2Q562F6 1265 aa13.92□□□□□ -0.18
TVP23A-201ENST00000299866 CYP4F22Q6NT55 531 aa13.92□□□□□ -0.18
TVP23A-201ENST00000299866 PPP1R21Q6ZMI0 780 aa13.92□□□□□ -0.18
TVP23A-201ENST00000299866 SLC51AQ86UW1 340 aa13.92□□□□□ -0.18
TVP23A-201ENST00000299866 ADGRF4Q8IZF3 695 aa13.92□□□□□ -0.18
TVP23A-201ENST00000299866 RBBP8NLQ8NC74 664 aaPredicted RBP13.92□□□□□ -0.18
TVP23A-201ENST00000299866 SYT11Q9BT88 431 aa13.92□□□□□ -0.18
TVP23A-201ENST00000299866 MXD3Q9BW11 206 aa13.92□□□□□ -0.18
TVP23A-201ENST00000299866 BHMT2Q9H2M3 363 aa13.92□□□□□ -0.18
TVP23A-201ENST00000299866 JMJD4Q9H9V9 463 aa13.92□□□□□ -0.18
TVP23A-201ENST00000299866 GPR75-ASB3A0A0A6YYF3 556 aa13.92□□□□□ -0.18
TVP23A-201ENST00000299866 SLC16A3O15427 465 aaKnown RBP13.92□□□□□ -0.18
TVP23A-201ENST00000299866 GPC5P78333 572 aa13.92□□□□□ -0.18
TVP23A-201ENST00000299866 KHDC1Q4VXA5 237 aaKnown RBP13.92□□□□□ -0.18
TVP23A-201ENST00000299866 ZC3H18Q86VM9 953 aaKnown RBP13.92□□□□□ -0.18
TVP23A-201ENST00000299866 ASB3Q9Y575 518 aa13.92□□□□□ -0.18
TVP23A-201ENST00000299866 KIAA1551Q9HCM1 1747 aa13.92□□□□□ -0.18
TVP23A-201ENST00000299866 DCCP43146 1447 aa13.92□□□□□ -0.18
TVP23A-201ENST00000299866 UBAP1LF5GYI3 381 aa13.92□□□□□ -0.18
TVP23A-201ENST00000299866 TP73O15350 636 aa13.92□□□□□ -0.18
TVP23A-201ENST00000299866 TGFB1I1O43294 461 aa13.92□□□□□ -0.18
TVP23A-201ENST00000299866 ADCY8P40145 1251 aa13.92□□□□□ -0.18
TVP23A-201ENST00000299866 TAF1BQ53T94 588 aaPredicted RBP13.92□□□□□ -0.18
TVP23A-201ENST00000299866 PRR16Q569H4 304 aa13.92□□□□□ -0.18
TVP23A-201ENST00000299866 SMIM5Q71RC9 77 aa13.92□□□□□ -0.18
TVP23A-201ENST00000299866 RPUSD2Q8IZ73 545 aaKnown RBP13.92□□□□□ -0.18
TVP23A-201ENST00000299866 SCOCQ9UIL1 159 aa13.92□□□□□ -0.18
TVP23A-201ENST00000299866 ANAPC5Q9UJX4 755 aa13.92□□□□□ -0.18
TVP23A-201ENST00000299866 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.91□□□□□ -0.18
TVP23A-201ENST00000299866 GTPBP10A4D1E9 387 aaKnown RBP13.91□□□□□ -0.18
TVP23A-201ENST00000299866 GGPS1O95749 300 aa13.91□□□□□ -0.18
TVP23A-201ENST00000299866 POLD1P28340 1107 aa13.91□□□□□ -0.18
TVP23A-201ENST00000299866 SMARCA1P28370 1054 aa13.91□□□□□ -0.18
TVP23A-201ENST00000299866 GRIPAP1Q4V328 841 aa13.91□□□□□ -0.18
TVP23A-201ENST00000299866 PHLDB3Q6NSJ2 640 aa13.91□□□□□ -0.18
TVP23A-201ENST00000299866 C11orf63Q6NUN7 778 aa13.91□□□□□ -0.18
TVP23A-201ENST00000299866 C16orf86Q6ZW13 317 aa13.91□□□□□ -0.18
TVP23A-201ENST00000299866 CADPS2Q86UW7 1296 aa13.91□□□□□ -0.18
TVP23A-201ENST00000299866 DTX3LQ8TDB6 740 aa13.91□□□□□ -0.18
TVP23A-201ENST00000299866 KIFAP3Q92845 792 aa13.91□□□□□ -0.18
TVP23A-201ENST00000299866 FAM118BQ9BPY3 351 aa13.91□□□□□ -0.18
TVP23A-201ENST00000299866 UBE2TQ9NPD8 197 aaPredicted RBP13.91□□□□□ -0.18
TVP23A-201ENST00000299866 CHST7Q9NS84 486 aa13.91□□□□□ -0.18
TVP23A-201ENST00000299866 APEX2Q9UBZ4 518 aa13.91□□□□□ -0.18
TVP23A-201ENST00000299866 COL22A1Q8NFW1 1626 aaPredicted RBP13.91□□□□□ -0.18
TVP23A-201ENST00000299866 LAMB1P07942 1786 aa13.91□□□□□ -0.18
TVP23A-201ENST00000299866 PNMA6FA0A0J9YX94 578 aa13.91□□□□□ -0.18
TVP23A-201ENST00000299866 FAM47DPA6NHR8 397 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms