RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 PALB2Q86YC2 1186 aa27.79■■■□□ 2.04
SDCCAG3-201ENST00000298537 KREMEN1Q96MU8 473 aa27.79■■■□□ 2.04
SDCCAG3-201ENST00000298537 ZIC5Q96T25 663 aa27.79■■■□□ 2.04
SDCCAG3-201ENST00000298537 C16orf70Q9BSU1 422 aa27.79■■■□□ 2.04
SDCCAG3-201ENST00000298537 CCDC113Q9H0I3 377 aa27.79■■■□□ 2.04
SDCCAG3-201ENST00000298537 TMEM8AQ9HCN3 771 aa27.79■■■□□ 2.04
SDCCAG3-201ENST00000298537 NAGPAQ9UK23 515 aa27.79■■■□□ 2.04
SDCCAG3-201ENST00000298537 ZNF233A6NK53 670 aa27.78■■■□□ 2.04
SDCCAG3-201ENST00000298537 HBP1O60381 514 aa27.78■■■□□ 2.04
SDCCAG3-201ENST00000298537 N4BP1O75113 896 aaKnown RBP27.78■■■□□ 2.04
SDCCAG3-201ENST00000298537 KIAA0753Q2KHM9 967 aa27.78■■■□□ 2.04
SDCCAG3-201ENST00000298537 PPTC7Q8NI37 304 aa27.78■■■□□ 2.04
SDCCAG3-201ENST00000298537 EVPLQ92817 2033 aa27.78■■■□□ 2.04
SDCCAG3-201ENST00000298537 MSTO1Q9BUK6 570 aa27.78■■■□□ 2.04
SDCCAG3-201ENST00000298537 TMEM134Q9H6X4 195 aa27.78■■■□□ 2.04
SDCCAG3-201ENST00000298537 MINDY3Q9H8M7 445 aa27.78■■■□□ 2.04
SDCCAG3-201ENST00000298537 MYH10P35580 1976 aa27.78■■■□□ 2.04
SDCCAG3-201ENST00000298537 P4HA2O15460 535 aa27.78■■■□□ 2.04
SDCCAG3-201ENST00000298537 C22orf31O95567 290 aa27.78■■■□□ 2.04
SDCCAG3-201ENST00000298537 FERP16591 822 aa27.78■■■□□ 2.04
SDCCAG3-201ENST00000298537 TNFSF9P41273 254 aa27.78■■■□□ 2.04
SDCCAG3-201ENST00000298537 GLYCTKQ8IVS8 523 aa27.78■■■□□ 2.04
SDCCAG3-201ENST00000298537 TMC2Q8TDI7 906 aa27.78■■■□□ 2.04
SDCCAG3-201ENST00000298537 A0A0B4J269 797 aa27.77■■■□□ 2.04
SDCCAG3-201ENST00000298537 CCL14Q16627 93 aa27.77■■■□□ 2.04
SDCCAG3-201ENST00000298537 PPM1KQ8N3J5 372 aa27.77■■■□□ 2.04
SDCCAG3-201ENST00000298537 NENFQ9UMX5 172 aa27.77■■■□□ 2.04
SDCCAG3-201ENST00000298537 TRPM7Q96QT4 1865 aa27.77■■■□□ 2.04
SDCCAG3-201ENST00000298537 B4GALT5O43286 388 aa27.76■■■□□ 2.04
SDCCAG3-201ENST00000298537 CETN1Q12798 172 aa27.76■■■□□ 2.04
SDCCAG3-201ENST00000298537 CDCA2Q69YH5 1023 aaPredicted RBP27.76■■■□□ 2.04
SDCCAG3-201ENST00000298537 RGMBQ6NW40 437 aa27.76■■■□□ 2.04
SDCCAG3-201ENST00000298537 ALKBH5Q6P6C2 394 aaKnown RBP27.76■■■□□ 2.04
SDCCAG3-201ENST00000298537 TRAPPC11Q7Z392 1133 aa27.76■■■□□ 2.04
SDCCAG3-201ENST00000298537 SLC20A1Q8WUM9 679 aa27.76■■■□□ 2.04
SDCCAG3-201ENST00000298537 KCNN1Q92952 543 aa27.76■■■□□ 2.04
SDCCAG3-201ENST00000298537 TATDN2Q93075 761 aa27.76■■■□□ 2.04
SDCCAG3-201ENST00000298537 BZW2Q9Y6E2 419 aaKnown RBP27.76■■■□□ 2.04
SDCCAG3-201ENST00000298537 TMCO5BA8MYB1 307 aa27.76■■■□□ 2.03
SDCCAG3-201ENST00000298537 ZNF185O15231 689 aa27.76■■■□□ 2.03
SDCCAG3-201ENST00000298537 NCK2O43639 380 aa27.76■■■□□ 2.03
SDCCAG3-201ENST00000298537 SLC26A2P50443 739 aa27.76■■■□□ 2.03
SDCCAG3-201ENST00000298537 SYT11Q9BT88 431 aa27.76■■■□□ 2.03
SDCCAG3-201ENST00000298537 KCNG1Q9UIX4 513 aa27.76■■■□□ 2.03
SDCCAG3-201ENST00000298537 DNAH12Q6ZR08 3092 aa27.76■■■□□ 2.03
SDCCAG3-201ENST00000298537 IQCF3P0C7M6 154 aa27.75■■■□□ 2.03
SDCCAG3-201ENST00000298537 MORN1Q5T089 497 aa27.75■■■□□ 2.03
SDCCAG3-201ENST00000298537 U2AF1L4Q8WU68 220 aaKnown RBP27.75■■■□□ 2.03
SDCCAG3-201ENST00000298537 COQ4Q9Y3A0 265 aa27.75■■■□□ 2.03
SDCCAG3-201ENST00000298537 SLC15A5A6NIM6 579 aa27.75■■■□□ 2.03
SDCCAG3-201ENST00000298537 USP8P40818 1118 aa27.75■■■□□ 2.03
SDCCAG3-201ENST00000298537 HELQQ8TDG4 1101 aa27.75■■■□□ 2.03
SDCCAG3-201ENST00000298537 TCP11Q8WWU5 503 aa27.75■■■□□ 2.03
SDCCAG3-201ENST00000298537 DHX38Q92620 1227 aaKnown RBP27.75■■■□□ 2.03
SDCCAG3-201ENST00000298537 RAB20Q9NX57 234 aa27.75■■■□□ 2.03
SDCCAG3-201ENST00000298537 CALCAP01258 141 aa27.74■■■□□ 2.03
SDCCAG3-201ENST00000298537 NAP1L1P55209 391 aaKnown RBP27.74■■■□□ 2.03
SDCCAG3-201ENST00000298537 DUSP28Q4G0W2 176 aa27.74■■■□□ 2.03
SDCCAG3-201ENST00000298537 FBXL13Q8NEE6 735 aa27.74■■■□□ 2.03
SDCCAG3-201ENST00000298537 SLC30A5Q8TAD4 765 aa27.74■■■□□ 2.03
SDCCAG3-201ENST00000298537 PSMB7Q99436 277 aa27.74■■■□□ 2.03
SDCCAG3-201ENST00000298537 ABHD16BQ9H3Z7 469 aa27.74■■■□□ 2.03
SDCCAG3-201ENST00000298537 TAS2R14Q9NYV8 317 aa27.74■■■□□ 2.03
SDCCAG3-201ENST00000298537 RBAKQ9NYW8 714 aaPredicted RBP27.74■■■□□ 2.03
SDCCAG3-201ENST00000298537 PMM2O15305 246 aa27.74■■■□□ 2.03
SDCCAG3-201ENST00000298537 PRKCBP05771 671 aa27.74■■■□□ 2.03
SDCCAG3-201ENST00000298537 CHMP4BP1P59074 171 aa27.74■■■□□ 2.03
SDCCAG3-201ENST00000298537 MXD4Q14582 209 aaPredicted RBP27.74■■■□□ 2.03
SDCCAG3-201ENST00000298537 NAB2Q15742 525 aa27.74■■■□□ 2.03
SDCCAG3-201ENST00000298537 TEX35Q5T0J7 233 aa27.74■■■□□ 2.03
SDCCAG3-201ENST00000298537 EMID1Q96A84 441 aaPredicted RBP27.74■■■□□ 2.03
SDCCAG3-201ENST00000298537 CAPZA3Q96KX2 299 aa27.74■■■□□ 2.03
SDCCAG3-201ENST00000298537 BRCA2P51587 3418 aa27.74■■■□□ 2.03
SDCCAG3-201ENST00000298537 MANSC4A6NHS7 340 aaPredicted RBP27.73■■■□□ 2.03
SDCCAG3-201ENST00000298537 TNNI1P19237 187 aa27.73■■■□□ 2.03
SDCCAG3-201ENST00000298537 CYP2C19P33261 490 aa27.73■■■□□ 2.03
SDCCAG3-201ENST00000298537 PSMD6Q15008 389 aa27.73■■■□□ 2.03
SDCCAG3-201ENST00000298537 TDRD10Q5VZ19 366 aaKnown RBP27.73■■■□□ 2.03
SDCCAG3-201ENST00000298537 PAPD7Q5XG87 772 aaKnown RBP27.73■■■□□ 2.03
SDCCAG3-201ENST00000298537 IFNL1Q8IU54 200 aa27.73■■■□□ 2.03
SDCCAG3-201ENST00000298537 OR6J1Q8NGC5 347 aa27.73■■■□□ 2.03
SDCCAG3-201ENST00000298537 ACO2Q99798 780 aaKnown RBP27.73■■■□□ 2.03
SDCCAG3-201ENST00000298537 GOLPH3Q9H4A6 298 aa27.73■■■□□ 2.03
SDCCAG3-201ENST00000298537 ABLIM1O14639 778 aa27.73■■■□□ 2.03
SDCCAG3-201ENST00000298537 FAM189A1O60320 539 aa27.73■■■□□ 2.03
SDCCAG3-201ENST00000298537 TACC1O75410 805 aa27.73■■■□□ 2.03
SDCCAG3-201ENST00000298537 MMP3P08254 477 aa27.73■■■□□ 2.03
SDCCAG3-201ENST00000298537 GPC3P51654 580 aa27.73■■■□□ 2.03
SDCCAG3-201ENST00000298537 GRM1Q13255 1194 aa27.73■■■□□ 2.03
SDCCAG3-201ENST00000298537 PRPF4BQ13523 1007 aaKnown RBP27.73■■■□□ 2.03
SDCCAG3-201ENST00000298537 C15orf39Q6ZRI6 1047 aa27.73■■■□□ 2.03
SDCCAG3-201ENST00000298537 ARID3AQ99856 593 aa27.73■■■□□ 2.03
SDCCAG3-201ENST00000298537 TCHPQ9BT92 498 aa27.73■■■□□ 2.03
SDCCAG3-201ENST00000298537 PPME1Q9Y570 386 aa27.73■■■□□ 2.03
SDCCAG3-201ENST00000298537 H3BRB1 525 aa27.72■■■□□ 2.03
SDCCAG3-201ENST00000298537 INO80B-WBP1J3KQ70 363 aa27.72■■■□□ 2.03
SDCCAG3-201ENST00000298537 CLDN3O15551 220 aa27.72■■■□□ 2.03
SDCCAG3-201ENST00000298537 VTNP04004 478 aa27.72■■■□□ 2.03
SDCCAG3-201ENST00000298537 SPOPLQ6IQ16 392 aa27.72■■■□□ 2.03
SDCCAG3-201ENST00000298537 TRIM58Q8NG06 486 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms