RNA–Protein interactions for RNA: ENST00000296953.6

CREBRF-201, Transcript of CREB3 regulatory factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CREBRF, Length 7,778 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CREBRF-201ENST00000296953 CAPSLQ8WWF8 208 aa3.32□□□□□ -1.88
CREBRF-201ENST00000296953 N4BP2L2Q92802 583 aaPredicted RBP3.32□□□□□ -1.88
CREBRF-201ENST00000296953 TSR2Q969E8 191 aaKnown RBP3.32□□□□□ -1.88
CREBRF-201ENST00000296953 NRBF2Q96F24 287 aa3.32□□□□□ -1.88
CREBRF-201ENST00000296953 ZHX3Q9H4I2 956 aa3.32□□□□□ -1.88
CREBRF-201ENST00000296953 SH3GLB2Q9NR46 395 aa3.32□□□□□ -1.88
CREBRF-201ENST00000296953 POLE3Q9NRF9 147 aa3.32□□□□□ -1.88
CREBRF-201ENST00000296953 IRAK4Q9NWZ3 460 aa3.32□□□□□ -1.88
CREBRF-201ENST00000296953 CRNNQ9UBG3 495 aaPredicted RBP3.32□□□□□ -1.88
CREBRF-201ENST00000296953 TBK1Q9UHD2 729 aa3.32□□□□□ -1.88
CREBRF-201ENST00000296953 DNAJC12Q9UKB3 198 aa3.32□□□□□ -1.88
CREBRF-201ENST00000296953 SLC12A4Q9UP95 1085 aa3.32□□□□□ -1.88
CREBRF-201ENST00000296953 USP20Q9Y2K6 914 aa3.32□□□□□ -1.88
CREBRF-201ENST00000296953 TPRP12270 2363 aaKnown RBP3.32□□□□□ -1.88
CREBRF-201ENST00000296953 UTYO14607 1347 aa3.32□□□□□ -1.88
CREBRF-201ENST00000296953 XDHP47989 1333 aa3.32□□□□□ -1.88
CREBRF-201ENST00000296953 PCDH11XQ9BZA7 1347 aa3.32□□□□□ -1.88
CREBRF-201ENST00000296953 ANK1P16157 1881 aa3.32□□□□□ -1.88
CREBRF-201ENST00000296953 B4DLN1 442 aa3.32□□□□□ -1.88
CREBRF-201ENST00000296953 H0YJX3 145 aa3.32□□□□□ -1.88
CREBRF-201ENST00000296953 MAPK13O15264 365 aa3.32□□□□□ -1.88
CREBRF-201ENST00000296953 RNF8O76064 485 aa3.32□□□□□ -1.88
CREBRF-201ENST00000296953 RHOBTB3O94955 611 aa3.32□□□□□ -1.88
CREBRF-201ENST00000296953 AMHP03971 560 aa3.32□□□□□ -1.88
CREBRF-201ENST00000296953 KRT5P13647 590 aa3.32□□□□□ -1.88
CREBRF-201ENST00000296953 IL13P35225 146 aa3.32□□□□□ -1.88
CREBRF-201ENST00000296953 EIF2B5Q13144 721 aaKnown RBP3.32□□□□□ -1.88
CREBRF-201ENST00000296953 DCTN2Q13561 401 aaKnown RBP3.32□□□□□ -1.88
CREBRF-201ENST00000296953 HSP90AA4PQ58FG1 418 aa3.32□□□□□ -1.88
CREBRF-201ENST00000296953 TMEM132EQ6IEE7 984 aa3.32□□□□□ -1.88
CREBRF-201ENST00000296953 TMTC3Q6ZXV5 915 aa3.32□□□□□ -1.88
CREBRF-201ENST00000296953 CDH24Q86UP0 819 aa3.32□□□□□ -1.88
CREBRF-201ENST00000296953 AACSQ86V21 672 aa3.32□□□□□ -1.88
CREBRF-201ENST00000296953 MCUR1Q96AQ8 359 aa3.32□□□□□ -1.88
CREBRF-201ENST00000296953 SLC45A3Q96JT2 553 aa3.32□□□□□ -1.88
CREBRF-201ENST00000296953 TRIM47Q96LD4 638 aa3.32□□□□□ -1.88
CREBRF-201ENST00000296953 USP28Q96RU2 1077 aa3.32□□□□□ -1.88
CREBRF-201ENST00000296953 USP44Q9H0E7 712 aa3.32□□□□□ -1.88
CREBRF-201ENST00000296953 ISCUQ9H1K1 167 aa3.32□□□□□ -1.88
CREBRF-201ENST00000296953 FAM124BQ9H5Z6 455 aaPredicted RBP3.32□□□□□ -1.88
CREBRF-201ENST00000296953 PLK2Q9NYY3 685 aa3.32□□□□□ -1.88
CREBRF-201ENST00000296953 SCAF8Q9UPN6 1271 aaKnown RBP3.32□□□□□ -1.88
CREBRF-201ENST00000296953 UTP11Q9Y3A2 253 aaKnown RBP3.32□□□□□ -1.88
CREBRF-201ENST00000296953 PCDHA3Q9Y5H8 950 aa3.32□□□□□ -1.88
CREBRF-201ENST00000296953 PCDH11YQ9BZA8 1340 aa3.32□□□□□ -1.88
CREBRF-201ENST00000296953 NACAE9PAV3 2078 aa3.32□□□□□ -1.88
CREBRF-201ENST00000296953 INTS1Q8N201 2190 aaKnown RBP3.31□□□□□ -1.88
CREBRF-201ENST00000296953 PRR23AA6NEV1 266 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 COPEO14579 308 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 KLHL41O60662 606 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 LSP1P33241 339 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 LIG3P49916 1009 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 METAP2P50579 478 aaKnown RBP eCLIP3.31□□□□□ -1.88
CREBRF-201ENST00000296953 DLG4P78352 724 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 SSRP1Q08945 709 aaKnown RBP3.31□□□□□ -1.88
CREBRF-201ENST00000296953 ARHGEF6Q15052 776 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 SLC45A4Q5BKX6 768 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 DGKHQ86XP1 1220 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 VPS37DQ86XT2 251 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 CBARPQ8N350 705 aaPredicted RBP3.31□□□□□ -1.88
CREBRF-201ENST00000296953 RAB3IL1Q8TBN0 382 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 DTX3LQ8TDB6 740 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 SERPINI1Q99574 410 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 KIFC3Q9BVG8 833 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 VPS45Q9NRW7 570 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 TRMT1Q9NXH9 659 aaKnown RBP3.31□□□□□ -1.88
CREBRF-201ENST00000296953 TMEM9Q9P0T7 183 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 CAPN11Q9UMQ6 739 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 AP4S1Q9Y587 144 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 SPO11Q9Y5K1 396 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 TOMM70O94826 608 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 GOT2P00505 430 aaKnown RBP3.31□□□□□ -1.88
CREBRF-201ENST00000296953 IFIT1P09914 478 aaKnown RBP3.31□□□□□ -1.88
CREBRF-201ENST00000296953 LINGO3P0C6S8 592 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 RAP1GAPP47736 663 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 MYL6P60660 151 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 PURAQ00577 322 aaKnown RBP3.31□□□□□ -1.88
CREBRF-201ENST00000296953 PTGISQ16647 500 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 CYB5D1Q6P9G0 228 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 CYFIP1Q7L576 1253 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 AFAP1L2Q8N4X5 818 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 TTC13Q8NBP0 860 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 RASSF5Q8WWW0 418 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 RAPGEF4Q8WZA2 1011 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 MED15Q96RN5 788 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 TTC1Q99614 292 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 DNAJC7Q99615 494 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 METTL22Q9BUU2 404 aaPredicted RBP3.31□□□□□ -1.88
CREBRF-201ENST00000296953 BRIP1Q9BX63 1249 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 B3GNT4Q9C0J1 378 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 SEL1LQ9UBV2 794 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 RRP7AQ9Y3A4 280 aaKnown RBP3.31□□□□□ -1.88
CREBRF-201ENST00000296953 NAALAD2Q9Y3Q0 740 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 CUL9Q8IWT3 2517 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 MTCL1Q9Y4B5 1905 aaKnown RBP3.31□□□□□ -1.88
CREBRF-201ENST00000296953 ANKRD62A6NC57 917 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 CTNND1O60716 968 aaKnown RBP3.31□□□□□ -1.88
CREBRF-201ENST00000296953 MTRF1O75570 445 aaKnown RBP3.31□□□□□ -1.88
CREBRF-201ENST00000296953 KRT2P35908 639 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 CSRP3P50461 194 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms