RNA–Protein interactions for RNA: ENST00000296783.7

PAPD4-201, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

APPRIS P3 TSL 2 BASIC

Gene PAPD4, Length 3,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-201ENST00000296783 ALG6Q9Y672 507 aa11.32□□□□□ -0.6
PAPD4-201ENST00000296783 ZNF233A6NK53 670 aa11.31□□□□□ -0.6
PAPD4-201ENST00000296783 SORBS3O60504 671 aa11.31□□□□□ -0.6
PAPD4-201ENST00000296783 RTN2O75298 545 aa11.31□□□□□ -0.6
PAPD4-201ENST00000296783 STAM2O75886 525 aa11.31□□□□□ -0.6
PAPD4-201ENST00000296783 KRT14P02533 472 aa11.31□□□□□ -0.6
PAPD4-201ENST00000296783 ATP4AP20648 1035 aa11.31□□□□□ -0.6
PAPD4-201ENST00000296783 USP8P40818 1118 aa11.31□□□□□ -0.6
PAPD4-201ENST00000296783 FSTL1Q12841 308 aa11.31□□□□□ -0.6
PAPD4-201ENST00000296783 NOL9Q5SY16 702 aaKnown RBP11.31□□□□□ -0.6
PAPD4-201ENST00000296783 TAF3Q5VWG9 929 aa11.31□□□□□ -0.6
PAPD4-201ENST00000296783 DDX42Q86XP3 938 aaKnown RBP eCLIP11.31□□□□□ -0.6
PAPD4-201ENST00000296783 MCPH1Q8NEM0 835 aa11.31□□□□□ -0.6
PAPD4-201ENST00000296783 FAM76AQ8TAV0 307 aa11.31□□□□□ -0.6
PAPD4-201ENST00000296783 POMGNT1Q8WZA1 660 aa11.31□□□□□ -0.6
PAPD4-201ENST00000296783 SEC14L1Q92503 715 aa11.31□□□□□ -0.6
PAPD4-201ENST00000296783 CDHR1Q96JP9 859 aa11.31□□□□□ -0.6
PAPD4-201ENST00000296783 PKNOX2Q96KN3 472 aa11.31□□□□□ -0.6
PAPD4-201ENST00000296783 SLITRK6Q9H5Y7 841 aa11.31□□□□□ -0.6
PAPD4-201ENST00000296783 GGA3Q9NZ52 723 aa11.31□□□□□ -0.6
PAPD4-201ENST00000296783 DIS3Q9Y2L1 958 aaKnown RBP11.31□□□□□ -0.6
PAPD4-201ENST00000296783 POLR2AP24928 1970 aaKnown RBP11.31□□□□□ -0.6
PAPD4-201ENST00000296783 PTPRFP10586 1907 aa11.31□□□□□ -0.6
PAPD4-201ENST00000296783 OPA1O60313 960 aa11.31□□□□□ -0.6
PAPD4-201ENST00000296783 DKC1O60832 514 aaKnown RBP eCLIP11.31□□□□□ -0.6
PAPD4-201ENST00000296783 SHOX2O60902 331 aaPredicted RBP11.31□□□□□ -0.6
PAPD4-201ENST00000296783 MMEP08473 750 aa11.31□□□□□ -0.6
PAPD4-201ENST00000296783 GZMAP12544 262 aa11.31□□□□□ -0.6
PAPD4-201ENST00000296783 HSPA9P38646 679 aaKnown RBP11.31□□□□□ -0.6
PAPD4-201ENST00000296783 HIRAP54198 1017 aaPredicted RBP11.31□□□□□ -0.6
PAPD4-201ENST00000296783 MFAP3P55082 362 aa11.31□□□□□ -0.6
PAPD4-201ENST00000296783 GPC5P78333 572 aa11.31□□□□□ -0.6
PAPD4-201ENST00000296783 CUL1Q13616 776 aa11.31□□□□□ -0.6
PAPD4-201ENST00000296783 BRDTQ58F21 947 aaPredicted RBP11.31□□□□□ -0.6
PAPD4-201ENST00000296783 C11orf63Q6NUN7 778 aa11.31□□□□□ -0.6
PAPD4-201ENST00000296783 SV2AQ7L0J3 742 aa11.31□□□□□ -0.6
PAPD4-201ENST00000296783 GOLGA6L1Q8N7Z2 621 aa11.31□□□□□ -0.6
PAPD4-201ENST00000296783 FBXL13Q8NEE6 735 aa11.31□□□□□ -0.6
PAPD4-201ENST00000296783 ELMO3Q96BJ8 720 aa11.31□□□□□ -0.6
PAPD4-201ENST00000296783 RNPC3Q96LT9 517 aaKnown RBP11.31□□□□□ -0.6
PAPD4-201ENST00000296783 ATP6V0A4Q9HBG4 840 aa11.31□□□□□ -0.6
PAPD4-201ENST00000296783 RAB20Q9NX57 234 aa11.31□□□□□ -0.6
PAPD4-201ENST00000296783 CHORDC1Q9UHD1 332 aaPredicted RBP11.31□□□□□ -0.6
PAPD4-201ENST00000296783 HNRNPDLO14979 420 aaKnown RBP11.31□□□□□ -0.6
PAPD4-201ENST00000296783 CYP11B1P15538 503 aa11.31□□□□□ -0.6
PAPD4-201ENST00000296783 GTF2H1P32780 548 aa11.31□□□□□ -0.6
PAPD4-201ENST00000296783 PPFIA1Q13136 1202 aa11.31□□□□□ -0.6
PAPD4-201ENST00000296783 LRRC31Q6UY01 552 aa11.31□□□□□ -0.6
PAPD4-201ENST00000296783 GPD1LQ8N335 351 aa11.31□□□□□ -0.6
PAPD4-201ENST00000296783 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.31□□□□□ -0.6
PAPD4-201ENST00000296783 DDX1Q92499 740 aaKnown RBP11.31□□□□□ -0.6
PAPD4-201ENST00000296783 CELF4Q9BZC1 486 aaKnown RBP11.31□□□□□ -0.6
PAPD4-201ENST00000296783 GPRC5DQ9NZD1 345 aa11.31□□□□□ -0.6
PAPD4-201ENST00000296783 CTTNBP2NLQ9P2B4 639 aa11.31□□□□□ -0.6
PAPD4-201ENST00000296783 CD2APQ9Y5K6 639 aa11.31□□□□□ -0.6
PAPD4-201ENST00000296783 MYPNQ86TC9 1320 aa11.3□□□□□ -0.6
PAPD4-201ENST00000296783 SIP14410 1827 aa11.3□□□□□ -0.6
PAPD4-201ENST00000296783 TTI1O43156 1089 aa11.3□□□□□ -0.6
PAPD4-201ENST00000296783 MTA2O94776 668 aa11.3□□□□□ -0.6
PAPD4-201ENST00000296783 SUPT20HL2P0C7V6 817 aa11.3□□□□□ -0.6
PAPD4-201ENST00000296783 GARTP22102 1010 aa11.3□□□□□ -0.6
PAPD4-201ENST00000296783 GNPTABQ3T906 1256 aa11.3□□□□□ -0.6
PAPD4-201ENST00000296783 SUPT20HL1Q3ZLR7 823 aa11.3□□□□□ -0.6
PAPD4-201ENST00000296783 LEKR1Q6ZMV7 388 aa11.3□□□□□ -0.6
PAPD4-201ENST00000296783 CD302Q8IX05 232 aa11.3□□□□□ -0.6
PAPD4-201ENST00000296783 KRT35Q92764 455 aa11.3□□□□□ -0.6
PAPD4-201ENST00000296783 FAM84AQ96KN4 292 aa11.3□□□□□ -0.6
PAPD4-201ENST00000296783 POLR3FQ9H1D9 316 aaPredicted RBP11.3□□□□□ -0.6
PAPD4-201ENST00000296783 ERVK-5Q9HDB9 667 aa11.3□□□□□ -0.6
PAPD4-201ENST00000296783 HOXC10Q9NYD6 342 aa11.3□□□□□ -0.6
PAPD4-201ENST00000296783 TMOD4Q9NZQ9 345 aa11.3□□□□□ -0.6
PAPD4-201ENST00000296783 ATMINO43313 823 aaPredicted RBP11.3□□□□□ -0.6
PAPD4-201ENST00000296783 GRIN3BO60391 1043 aa11.3□□□□□ -0.6
PAPD4-201ENST00000296783 ATG7O95352 703 aa11.3□□□□□ -0.6
PAPD4-201ENST00000296783 ENPEPQ07075 957 aa11.3□□□□□ -0.6
PAPD4-201ENST00000296783 ZNF211Q13398 564 aaPredicted RBP11.3□□□□□ -0.6
PAPD4-201ENST00000296783 SH3D19Q5HYK7 790 aa11.3□□□□□ -0.6
PAPD4-201ENST00000296783 CFAP58Q5T655 872 aa11.3□□□□□ -0.6
PAPD4-201ENST00000296783 NAA35Q5VZE5 725 aa11.3□□□□□ -0.6
PAPD4-201ENST00000296783 AADACL2Q6P093 401 aa11.3□□□□□ -0.6
PAPD4-201ENST00000296783 C15orf39Q6ZRI6 1047 aa11.3□□□□□ -0.6
PAPD4-201ENST00000296783 DHX38Q92620 1227 aaKnown RBP11.3□□□□□ -0.6
PAPD4-201ENST00000296783 TATDN2Q93075 761 aa11.3□□□□□ -0.6
PAPD4-201ENST00000296783 MAF1Q9H063 256 aa11.3□□□□□ -0.6
PAPD4-201ENST00000296783 MAFBQ9Y5Q3 323 aaPredicted RBP11.3□□□□□ -0.6
PAPD4-201ENST00000296783 SYNGAP1Q96PV0 1343 aa11.3□□□□□ -0.6
PAPD4-201ENST00000296783 A0A0G2JMZ2 1700 aa11.29□□□□□ -0.6
PAPD4-201ENST00000296783 PEX10O60683 326 aa11.29□□□□□ -0.6
PAPD4-201ENST00000296783 DLATP10515 647 aaKnown RBP11.29□□□□□ -0.6
PAPD4-201ENST00000296783 ICAM3P32942 547 aa11.29□□□□□ -0.6
PAPD4-201ENST00000296783 MARCKSL1P49006 195 aa11.29□□□□□ -0.6
PAPD4-201ENST00000296783 WNT7BP56706 349 aa11.29□□□□□ -0.6
PAPD4-201ENST00000296783 PTENP60484 403 aa11.29□□□□□ -0.6
PAPD4-201ENST00000296783 MTERF2Q49AM1 385 aa11.29□□□□□ -0.6
PAPD4-201ENST00000296783 XKR3Q5GH77 459 aa11.29□□□□□ -0.6
PAPD4-201ENST00000296783 MIS18BP1Q6P0N0 1132 aa11.29□□□□□ -0.6
PAPD4-201ENST00000296783 ZNF516Q92618 1163 aa11.29□□□□□ -0.6
PAPD4-201ENST00000296783 KCNN1Q92952 543 aa11.29□□□□□ -0.6
PAPD4-201ENST00000296783 NT5C1BQ96P26 610 aa11.29□□□□□ -0.6
PAPD4-201ENST00000296783 CEP89Q96ST8 783 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms