RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 CENPUQ71F23 418 aa12.42□□□□□ -0.42
SNIP1-201ENST00000296215 CD302Q8IX05 232 aa12.42□□□□□ -0.42
SNIP1-201ENST00000296215 C8orf58Q8NAV2 365 aa12.42□□□□□ -0.42
SNIP1-201ENST00000296215 LRRC39Q96DD0 335 aa12.42□□□□□ -0.42
SNIP1-201ENST00000296215 WNK4Q96J92 1243 aa12.42□□□□□ -0.42
SNIP1-201ENST00000296215 FAM227BQ96M60 508 aa12.42□□□□□ -0.42
SNIP1-201ENST00000296215 HEPHQ9BQS7 1158 aa12.42□□□□□ -0.42
SNIP1-201ENST00000296215 CABP5Q9NP86 173 aa12.42□□□□□ -0.42
SNIP1-201ENST00000296215 UVRAGQ9P2Y5 699 aa12.42□□□□□ -0.42
SNIP1-201ENST00000296215 STK39Q9UEW8 545 aa12.42□□□□□ -0.42
SNIP1-201ENST00000296215 IP6K2Q9UHH9 426 aa12.42□□□□□ -0.42
SNIP1-201ENST00000296215 TTC26A0AVF1 554 aa12.42□□□□□ -0.42
SNIP1-201ENST00000296215 TMEM191CA6NGB0 347 aa12.42□□□□□ -0.42
SNIP1-201ENST00000296215 FAM196BA6NMK8 535 aa12.42□□□□□ -0.42
SNIP1-201ENST00000296215 TTC4O95801 387 aa12.42□□□□□ -0.42
SNIP1-201ENST00000296215 TMEM191BP0C7N4 346 aa12.42□□□□□ -0.42
SNIP1-201ENST00000296215 TPBGLP0DKB5 382 aa12.42□□□□□ -0.42
SNIP1-201ENST00000296215 PLCG2P16885 1265 aa12.42□□□□□ -0.42
SNIP1-201ENST00000296215 SERPINH1P50454 418 aaKnown RBP12.42□□□□□ -0.42
SNIP1-201ENST00000296215 MSLNQ13421 630 aaPredicted RBP12.42□□□□□ -0.42
SNIP1-201ENST00000296215 ZC2HC1CQ53FD0 456 aaPredicted RBP12.42□□□□□ -0.42
SNIP1-201ENST00000296215 FNDC8Q8TC99 324 aa12.42□□□□□ -0.42
SNIP1-201ENST00000296215 ITPKCQ96DU7 683 aa12.42□□□□□ -0.42
SNIP1-201ENST00000296215 HMG20AQ9NP66 347 aa12.42□□□□□ -0.42
SNIP1-201ENST00000296215 QPCTLQ9NXS2 382 aa12.42□□□□□ -0.42
SNIP1-201ENST00000296215 STK17AQ9UEE5 414 aa12.42□□□□□ -0.42
SNIP1-201ENST00000296215 CCDC194A0A1B0GVG4 234 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 NR1H3Q13133 447 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 EDRF1Q3B7T1 1238 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 ITPRIPL1Q6GPH6 555 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 SAMD14Q8IZD0 417 aaPredicted RBP12.41□□□□□ -0.42
SNIP1-201ENST00000296215 TPK1Q9H3S4 243 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 SLITRK6Q9H5Y7 841 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 DNMBPQ6XZF7 1577 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 AFF2P51816 1311 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 SPATA31E1Q6ZUB1 1445 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 A0A1B0GTH6 734 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 SMCO2A6NFE2 343 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 AREL1O15033 823 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 H2AFZP0C0S5 128 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 IREB2P48200 963 aaKnown RBP12.41□□□□□ -0.42
SNIP1-201ENST00000296215 GNG2P59768 71 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 PDE4DQ08499 809 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 TRAF2Q12933 501 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 H2AFVQ71UI9 128 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 NSUN7Q8NE18 718 aaKnown RBP12.41□□□□□ -0.42
SNIP1-201ENST00000296215 FAM13CQ8NE31 585 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 MRPS26Q9BYN8 205 aaKnown RBP12.41□□□□□ -0.42
SNIP1-201ENST00000296215 ARPP21Q9UBL0 812 aaPredicted RBP12.41□□□□□ -0.42
SNIP1-201ENST00000296215 CLEC11AQ9Y240 323 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 SPO11Q9Y5K1 396 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 AQRO60306 1485 aaKnown RBP eCLIP12.41□□□□□ -0.42
SNIP1-201ENST00000296215 LRRC10BA6NIK2 292 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 PPP6R2O75170 966 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 NCF2P19878 526 aaPredicted RBP12.41□□□□□ -0.42
SNIP1-201ENST00000296215 ZNF844Q08AG5 666 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 NR1I3Q14994 352 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 PON2Q15165 354 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 STK11Q15831 433 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 SLC10A5Q5PT55 438 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 TTC33Q6PID6 262 aaPredicted RBP12.41□□□□□ -0.42
SNIP1-201ENST00000296215 COL23A1Q86Y22 540 aaPredicted RBP12.41□□□□□ -0.42
SNIP1-201ENST00000296215 CENPTQ96BT3 561 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 C1orf50Q9BV19 199 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 NFIBO00712 420 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 MAGEB3O15480 346 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 FGGP02679 453 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 ZNF423Q2M1K9 1284 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 C3orf67Q6ZVT6 689 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 FAM228AQ86W67 206 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 ANKMY2Q8IV38 441 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 GRAMD1CQ8IYS0 662 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 MB21D1Q8N884 522 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 GRPEL2Q8TAA5 225 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 EEF2KMTQ96G04 330 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 XAGE2Q96GT9 111 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 CCDC90BQ9GZT6 254 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 SIK3Q9Y2K2 1263 aa12.41□□□□□ -0.42
SNIP1-201ENST00000296215 UHRF1BP1LA0JNW5 1464 aa12.4□□□□□ -0.42
SNIP1-201ENST00000296215 RALGAPBQ86X10 1494 aa12.4□□□□□ -0.42
SNIP1-201ENST00000296215 PDZK1P1A8MUH7 402 aa12.4□□□□□ -0.42
SNIP1-201ENST00000296215 USP12O75317 370 aa12.4□□□□□ -0.42
SNIP1-201ENST00000296215 CBX6O95503 412 aa12.4□□□□□ -0.42
SNIP1-201ENST00000296215 FAM153BP0C7A2 387 aa12.4□□□□□ -0.42
SNIP1-201ENST00000296215 PMLP29590 882 aa12.4□□□□□ -0.42
SNIP1-201ENST00000296215 S100A5P33763 92 aa12.4□□□□□ -0.42
SNIP1-201ENST00000296215 SKIV2L2P42285 1042 aaKnown RBP12.4□□□□□ -0.42
SNIP1-201ENST00000296215 FAM153CQ494X1 144 aa12.4□□□□□ -0.42
SNIP1-201ENST00000296215 MDH1BQ5I0G3 518 aa12.4□□□□□ -0.42
SNIP1-201ENST00000296215 APOA5Q6Q788 366 aa12.4□□□□□ -0.42
SNIP1-201ENST00000296215 GALNT7Q86SF2 657 aa12.4□□□□□ -0.42
SNIP1-201ENST00000296215 GDPD5Q8WTR4 605 aa12.4□□□□□ -0.42
SNIP1-201ENST00000296215 BTBD10Q9BSF8 475 aa12.4□□□□□ -0.42
SNIP1-201ENST00000296215 OSBPL8Q9BZF1 889 aa12.4□□□□□ -0.42
SNIP1-201ENST00000296215 FAIMQ9NVQ4 179 aa12.4□□□□□ -0.42
SNIP1-201ENST00000296215 GMIPQ9P107 970 aa12.4□□□□□ -0.42
SNIP1-201ENST00000296215 SHBGP04278 402 aa12.4□□□□□ -0.42
SNIP1-201ENST00000296215 SMUG1Q53HV7 270 aa12.4□□□□□ -0.42
SNIP1-201ENST00000296215 PPP4R4Q6NUP7 873 aa12.4□□□□□ -0.42
SNIP1-201ENST00000296215 IFNL1Q8IU54 200 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms