RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 GOLGA6L10A6NI86 522 aa17.01■□□□□ 0.31
NCKIPSD-201ENST00000294129 SPOPO43791 374 aa17.01■□□□□ 0.31
NCKIPSD-201ENST00000294129 HARSP12081 509 aaKnown RBP17.01■□□□□ 0.31
NCKIPSD-201ENST00000294129 RFX1P22670 979 aa17.01■□□□□ 0.31
NCKIPSD-201ENST00000294129 MFAP3P55082 362 aa17.01■□□□□ 0.31
NCKIPSD-201ENST00000294129 CUL1Q13616 776 aa17.01■□□□□ 0.31
NCKIPSD-201ENST00000294129 C18orf8Q96DM3 657 aa17.01■□□□□ 0.31
NCKIPSD-201ENST00000294129 GOLGA6L10A0A0M3HER8 536 aa17.01■□□□□ 0.31
NCKIPSD-201ENST00000294129 DHX9Q08211 1270 aaKnown RBP17.01■□□□□ 0.31
NCKIPSD-201ENST00000294129 FSTL1Q12841 308 aa17.01■□□□□ 0.31
NCKIPSD-201ENST00000294129 UAP1Q16222 522 aaPredicted RBP17.01■□□□□ 0.31
NCKIPSD-201ENST00000294129 SV2AQ7L0J3 742 aa17.01■□□□□ 0.31
NCKIPSD-201ENST00000294129 FMNL3Q8IVF7 1028 aa17.01■□□□□ 0.31
NCKIPSD-201ENST00000294129 MAP4K3Q8IVH8 894 aa17.01■□□□□ 0.31
NCKIPSD-201ENST00000294129 RHOT2Q8IXI1 618 aa17.01■□□□□ 0.31
NCKIPSD-201ENST00000294129 NSUN6Q8TEA1 469 aaKnown RBP17.01■□□□□ 0.31
NCKIPSD-201ENST00000294129 ATP6V0A1Q93050 837 aa17.01■□□□□ 0.31
NCKIPSD-201ENST00000294129 NT5C1BQ96P26 610 aa17.01■□□□□ 0.31
NCKIPSD-201ENST00000294129 NUP85Q9BW27 656 aa17.01■□□□□ 0.31
NCKIPSD-201ENST00000294129 FAM107BQ9H098 131 aa17.01■□□□□ 0.31
NCKIPSD-201ENST00000294129 POLR3FQ9H1D9 316 aaPredicted RBP17.01■□□□□ 0.31
NCKIPSD-201ENST00000294129 A1CFQ9NQ94 594 aaKnown RBP17.01■□□□□ 0.31
NCKIPSD-201ENST00000294129 ATP8A1Q9Y2Q0 1164 aa17.01■□□□□ 0.31
NCKIPSD-201ENST00000294129 KCNA2P16389 499 aa17.01■□□□□ 0.31
NCKIPSD-201ENST00000294129 ACOT2P49753 483 aa17.01■□□□□ 0.31
NCKIPSD-201ENST00000294129 PDE6CP51160 858 aa17.01■□□□□ 0.31
NCKIPSD-201ENST00000294129 DR1Q01658 176 aa17.01■□□□□ 0.31
NCKIPSD-201ENST00000294129 DCAF15Q66K64 600 aa17.01■□□□□ 0.31
NCKIPSD-201ENST00000294129 C12orf56Q8IXR9 622 aa17.01■□□□□ 0.31
NCKIPSD-201ENST00000294129 VPS33BQ9H267 617 aa17.01■□□□□ 0.31
NCKIPSD-201ENST00000294129 RAB20Q9NX57 234 aa17.01■□□□□ 0.31
NCKIPSD-201ENST00000294129 ZNF214Q9UL59 606 aaPredicted RBP17.01■□□□□ 0.31
NCKIPSD-201ENST00000294129 SNX24Q9Y343 169 aa17.01■□□□□ 0.31
NCKIPSD-201ENST00000294129 RTN2O75298 545 aa17■□□□□ 0.31
NCKIPSD-201ENST00000294129 CYP11B1P15538 503 aa17■□□□□ 0.31
NCKIPSD-201ENST00000294129 HSPA9P38646 679 aaKnown RBP17■□□□□ 0.31
NCKIPSD-201ENST00000294129 ACTR2P61160 394 aa17■□□□□ 0.31
NCKIPSD-201ENST00000294129 FMO1Q01740 532 aa17■□□□□ 0.31
NCKIPSD-201ENST00000294129 LLGL2Q6P1M3 1020 aa17■□□□□ 0.31
NCKIPSD-201ENST00000294129 SEPT14Q6ZU15 432 aa17■□□□□ 0.31
NCKIPSD-201ENST00000294129 FAM71AQ8IYT1 594 aa17■□□□□ 0.31
NCKIPSD-201ENST00000294129 FBXL13Q8NEE6 735 aa17■□□□□ 0.31
NCKIPSD-201ENST00000294129 ZNF526Q8TF50 670 aaPredicted RBP17■□□□□ 0.31
NCKIPSD-201ENST00000294129 SLITRK6Q9H5Y7 841 aa17■□□□□ 0.31
NCKIPSD-201ENST00000294129 SLC9A2Q9UBY0 812 aa17■□□□□ 0.31
NCKIPSD-201ENST00000294129 NOCTQ9UK39 431 aaKnown RBP17■□□□□ 0.31
NCKIPSD-201ENST00000294129 PTPN22Q9Y2R2 807 aa17■□□□□ 0.31
NCKIPSD-201ENST00000294129 COL11A1P12107 1806 aaPredicted RBP17■□□□□ 0.31
NCKIPSD-201ENST00000294129 PPFIA4O75335 1185 aa17■□□□□ 0.31
NCKIPSD-201ENST00000294129 CARD9Q9H257 536 aa17■□□□□ 0.31
NCKIPSD-201ENST00000294129 XPNPEP1Q9NQW7 623 aa17■□□□□ 0.31
NCKIPSD-201ENST00000294129 TCRBV7S2A1N4TA0A589 114 aa16.99■□□□□ 0.31
NCKIPSD-201ENST00000294129 P4HA2O15460 535 aa16.99■□□□□ 0.31
NCKIPSD-201ENST00000294129 PSAPP07602 524 aa16.99■□□□□ 0.31
NCKIPSD-201ENST00000294129 TNNI1P19237 187 aa16.99■□□□□ 0.31
NCKIPSD-201ENST00000294129 NR1D1P20393 614 aa16.99■□□□□ 0.31
NCKIPSD-201ENST00000294129 PLTPP55058 493 aa16.99■□□□□ 0.31
NCKIPSD-201ENST00000294129 GHRHRQ02643 423 aa16.99■□□□□ 0.31
NCKIPSD-201ENST00000294129 PDE4CQ08493 712 aa16.99■□□□□ 0.31
NCKIPSD-201ENST00000294129 SEZ6Q53EL9 994 aa16.99■□□□□ 0.31
NCKIPSD-201ENST00000294129 ODF2Q5BJF6 829 aa16.99■□□□□ 0.31
NCKIPSD-201ENST00000294129 SPOPLQ6IQ16 392 aa16.99■□□□□ 0.31
NCKIPSD-201ENST00000294129 UBL4BQ8N7F7 174 aa16.99■□□□□ 0.31
NCKIPSD-201ENST00000294129 ZNF564Q8TBZ8 553 aaPredicted RBP16.99■□□□□ 0.31
NCKIPSD-201ENST00000294129 TRPM4Q8TD43 1214 aa16.99■□□□□ 0.31
NCKIPSD-201ENST00000294129 AS3MTQ9HBK9 375 aa16.99■□□□□ 0.31
NCKIPSD-201ENST00000294129 TMEM8AQ9HCN3 771 aa16.99■□□□□ 0.31
NCKIPSD-201ENST00000294129 ANKFY1Q9P2R3 1169 aa16.99■□□□□ 0.31
NCKIPSD-201ENST00000294129 TRPC6Q9Y210 931 aa16.99■□□□□ 0.31
NCKIPSD-201ENST00000294129 LRRIQ4A6NIV6 560 aa16.99■□□□□ 0.31
NCKIPSD-201ENST00000294129 SMIM23A6NLE4 172 aa16.99■□□□□ 0.31
NCKIPSD-201ENST00000294129 LIG4P49917 911 aa16.99■□□□□ 0.31
NCKIPSD-201ENST00000294129 POLGP54098 1239 aaPredicted RBP16.99■□□□□ 0.31
NCKIPSD-201ENST00000294129 CNTN2Q02246 1040 aa16.99■□□□□ 0.31
NCKIPSD-201ENST00000294129 CYP24A1Q07973 514 aa16.99■□□□□ 0.31
NCKIPSD-201ENST00000294129 BIRC3Q13489 604 aa16.99■□□□□ 0.31
NCKIPSD-201ENST00000294129 EEPD1Q7L9B9 569 aa16.99■□□□□ 0.31
NCKIPSD-201ENST00000294129 MREGQ8N565 214 aa16.99■□□□□ 0.31
NCKIPSD-201ENST00000294129 UHMK1Q8TAS1 419 aaKnown RBP16.99■□□□□ 0.31
NCKIPSD-201ENST00000294129 HELQQ8TDG4 1101 aa16.99■□□□□ 0.31
NCKIPSD-201ENST00000294129 KIFAP3Q92845 792 aa16.99■□□□□ 0.31
NCKIPSD-201ENST00000294129 LRRC45Q96CN5 670 aa16.99■□□□□ 0.31
NCKIPSD-201ENST00000294129 IFT74Q96LB3 600 aa16.99■□□□□ 0.31
NCKIPSD-201ENST00000294129 LRRC4CQ9HCJ2 640 aa16.99■□□□□ 0.31
NCKIPSD-201ENST00000294129 CYP26B1Q9NR63 512 aa16.99■□□□□ 0.31
NCKIPSD-201ENST00000294129 MYH9P35579 1960 aaKnown RBP16.98■□□□□ 0.31
NCKIPSD-201ENST00000294129 EIF3HO15372 352 aaKnown RBP eCLIP16.98■□□□□ 0.31
NCKIPSD-201ENST00000294129 RPS6KA5O75582 802 aa16.98■□□□□ 0.31
NCKIPSD-201ENST00000294129 MYZAPP0CAP1 466 aa16.98■□□□□ 0.31
NCKIPSD-201ENST00000294129 SP2Q02086 613 aa16.98■□□□□ 0.31
NCKIPSD-201ENST00000294129 DAB2IPQ5VWQ8 1189 aa16.98■□□□□ 0.31
NCKIPSD-201ENST00000294129 SHC3Q92529 594 aa16.98■□□□□ 0.31
NCKIPSD-201ENST00000294129 MAGOHBQ96A72 148 aaKnown RBP16.98■□□□□ 0.31
NCKIPSD-201ENST00000294129 GPRASP2Q96D09 838 aa16.98■□□□□ 0.31
NCKIPSD-201ENST00000294129 ATP6V1G3Q96LB4 118 aa16.98■□□□□ 0.31
NCKIPSD-201ENST00000294129 TRIM7Q9C029 511 aa16.98■□□□□ 0.31
NCKIPSD-201ENST00000294129 ST6GALNAC4Q9H4F1 302 aa16.98■□□□□ 0.31
NCKIPSD-201ENST00000294129 MAP3K20Q9NYL2 800 aaKnown RBP16.98■□□□□ 0.31
NCKIPSD-201ENST00000294129 CYP39A1Q9NYL5 469 aa16.98■□□□□ 0.31
NCKIPSD-201ENST00000294129 DAAM1Q9Y4D1 1078 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms