RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 FMO5P49326 533 aa13.58□□□□□ -0.24
PTCD1-201ENST00000292478 NOP53Q9NZM5 478 aaKnown RBP13.58□□□□□ -0.24
PTCD1-201ENST00000292478 STAT5BP51692 787 aa13.58□□□□□ -0.24
PTCD1-201ENST00000292478 COPS2P61201 443 aa13.58□□□□□ -0.24
PTCD1-201ENST00000292478 GPS1Q13098 491 aa13.58□□□□□ -0.24
PTCD1-201ENST00000292478 TRIM4Q9C037 500 aa13.58□□□□□ -0.24
PTCD1-201ENST00000292478 HEY1Q9Y5J3 304 aa13.58□□□□□ -0.24
PTCD1-201ENST00000292478 GPR75-ASB3A0A0A6YYF3 556 aa13.58□□□□□ -0.24
PTCD1-201ENST00000292478 CDC42EP5Q6NZY7 148 aa13.58□□□□□ -0.24
PTCD1-201ENST00000292478 TADA2BQ86TJ2 420 aa13.58□□□□□ -0.24
PTCD1-201ENST00000292478 FAM151AQ8WW52 585 aa13.58□□□□□ -0.24
PTCD1-201ENST00000292478 FSD1LQ9BXM9 530 aa13.58□□□□□ -0.24
PTCD1-201ENST00000292478 TEX13BQ9BXU2 312 aa13.58□□□□□ -0.24
PTCD1-201ENST00000292478 FOXP3Q9BZS1 431 aa13.58□□□□□ -0.24
PTCD1-201ENST00000292478 FAM217BQ9NTX9 383 aaPredicted RBP13.58□□□□□ -0.24
PTCD1-201ENST00000292478 RFC5P40937 340 aa13.57□□□□□ -0.24
PTCD1-201ENST00000292478 KIAA1755Q5JYT7 1200 aa13.57□□□□□ -0.24
PTCD1-201ENST00000292478 TNIP3Q96KP6 325 aa13.57□□□□□ -0.24
PTCD1-201ENST00000292478 WDR24Q96S15 920 aa13.57□□□□□ -0.24
PTCD1-201ENST00000292478 ZBTB18Q99592 522 aa13.57□□□□□ -0.24
PTCD1-201ENST00000292478 REEP2Q9BRK0 252 aa13.57□□□□□ -0.24
PTCD1-201ENST00000292478 MAGED2Q9UNF1 606 aaPredicted RBP13.57□□□□□ -0.24
PTCD1-201ENST00000292478 MYMKA6NI61 221 aa13.57□□□□□ -0.24
PTCD1-201ENST00000292478 BRAFP15056 766 aa13.57□□□□□ -0.24
PTCD1-201ENST00000292478 NAB2Q15742 525 aa13.57□□□□□ -0.24
PTCD1-201ENST00000292478 IZUMO3Q5VZ72 239 aa13.57□□□□□ -0.24
PTCD1-201ENST00000292478 GTF3C2Q8WUA4 911 aaPredicted RBP13.57□□□□□ -0.24
PTCD1-201ENST00000292478 KCNF1Q9H3M0 494 aa13.57□□□□□ -0.24
PTCD1-201ENST00000292478 BFARQ9NZS9 450 aa13.57□□□□□ -0.24
PTCD1-201ENST00000292478 CTDNEP1O95476 244 aa13.57□□□□□ -0.24
PTCD1-201ENST00000292478 PYGBP11216 843 aa13.57□□□□□ -0.24
PTCD1-201ENST00000292478 MRPS25P82663 173 aaKnown RBP13.57□□□□□ -0.24
PTCD1-201ENST00000292478 E2F5Q15329 346 aa13.57□□□□□ -0.24
PTCD1-201ENST00000292478 ZNF746Q6NUN9 644 aaPredicted RBP13.57□□□□□ -0.24
PTCD1-201ENST00000292478 NLRP14Q86W24 1093 aa13.57□□□□□ -0.24
PTCD1-201ENST00000292478 RDM1Q8NG50 284 aa13.57□□□□□ -0.24
PTCD1-201ENST00000292478 TRPV6Q9H1D0 765 aa13.57□□□□□ -0.24
PTCD1-201ENST00000292478 VCPKMTQ9H867 229 aa13.57□□□□□ -0.24
PTCD1-201ENST00000292478 RGL1Q9NZL6 768 aa13.57□□□□□ -0.24
PTCD1-201ENST00000292478 PPARGC1AQ9UBK2 798 aaKnown RBP13.57□□□□□ -0.24
PTCD1-201ENST00000292478 ZFP69BQ9UJL9 534 aa13.57□□□□□ -0.24
PTCD1-201ENST00000292478 NVLO15381 856 aaKnown RBP13.57□□□□□ -0.24
PTCD1-201ENST00000292478 PRKCBP05771 671 aa13.57□□□□□ -0.24
PTCD1-201ENST00000292478 UCHL3P15374 230 aa13.57□□□□□ -0.24
PTCD1-201ENST00000292478 HDLBPQ00341 1268 aaKnown RBP13.57□□□□□ -0.24
PTCD1-201ENST00000292478 PDIA2Q13087 525 aaKnown RBP13.57□□□□□ -0.24
PTCD1-201ENST00000292478 PRKAG2Q9UGJ0 569 aa13.57□□□□□ -0.24
PTCD1-201ENST00000292478 SUN2Q9UH99 717 aa13.57□□□□□ -0.24
PTCD1-201ENST00000292478 A0A0G2JND7 137 aa13.56□□□□□ -0.24
PTCD1-201ENST00000292478 PSMD14O00487 310 aa13.56□□□□□ -0.24
PTCD1-201ENST00000292478 GYG2O15488 501 aa13.56□□□□□ -0.24
PTCD1-201ENST00000292478 FAM102AQ5T9C2 384 aaPredicted RBP13.56□□□□□ -0.24
PTCD1-201ENST00000292478 CHMP6Q96FZ7 201 aa13.56□□□□□ -0.24
PTCD1-201ENST00000292478 SETD1BQ9UPS6 1966 aaKnown RBP13.56□□□□□ -0.24
PTCD1-201ENST00000292478 FAM205CA6NFA0 338 aa13.56□□□□□ -0.24
PTCD1-201ENST00000292478 PHF2O75151 1096 aa13.56□□□□□ -0.24
PTCD1-201ENST00000292478 RPA1P27694 616 aa13.56□□□□□ -0.24
PTCD1-201ENST00000292478 SLC10A5Q5PT55 438 aa13.56□□□□□ -0.24
PTCD1-201ENST00000292478 TEDDM1Q5T9Z0 273 aa13.56□□□□□ -0.24
PTCD1-201ENST00000292478 TRMT10CQ7L0Y3 403 aaKnown RBP13.56□□□□□ -0.24
PTCD1-201ENST00000292478 TBC1D1Q86TI0 1168 aaPredicted RBP13.56□□□□□ -0.24
PTCD1-201ENST00000292478 FBXL5Q9UKA1 691 aa13.56□□□□□ -0.24
PTCD1-201ENST00000292478 HPCAL4Q9UM19 191 aa13.56□□□□□ -0.24
PTCD1-201ENST00000292478 FAF1Q9UNN5 650 aaPredicted RBP13.56□□□□□ -0.24
PTCD1-201ENST00000292478 CFAP73A6NFT4 308 aa13.56□□□□□ -0.24
PTCD1-201ENST00000292478 AGTP01019 485 aa13.56□□□□□ -0.24
PTCD1-201ENST00000292478 SETSIPP0DME0 302 aa13.56□□□□□ -0.24
PTCD1-201ENST00000292478 TSTA3Q13630 321 aaPredicted RBP13.56□□□□□ -0.24
PTCD1-201ENST00000292478 MTF1Q14872 753 aa13.56□□□□□ -0.24
PTCD1-201ENST00000292478 BEND6Q5SZJ8 279 aaPredicted RBP13.56□□□□□ -0.24
PTCD1-201ENST00000292478 IFT43Q96FT9 208 aa13.56□□□□□ -0.24
PTCD1-201ENST00000292478 POLR3CQ9BUI4 534 aaPredicted RBP13.56□□□□□ -0.24
PTCD1-201ENST00000292478 PRR12Q9ULL5 1215 aa13.56□□□□□ -0.24
PTCD1-201ENST00000292478 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.56□□□□□ -0.24
PTCD1-201ENST00000292478 A8MXQ7 604 aa13.56□□□□□ -0.24
PTCD1-201ENST00000292478 CYP26A1O43174 497 aa13.56□□□□□ -0.24
PTCD1-201ENST00000292478 SPAG7O75391 227 aa13.56□□□□□ -0.24
PTCD1-201ENST00000292478 OCRLQ01968 901 aa13.56□□□□□ -0.24
PTCD1-201ENST00000292478 BYSLQ13895 437 aaKnown RBP13.56□□□□□ -0.24
PTCD1-201ENST00000292478 STYK1Q6J9G0 422 aa13.56□□□□□ -0.24
PTCD1-201ENST00000292478 TC2NQ8N9U0 490 aa13.56□□□□□ -0.24
PTCD1-201ENST00000292478 LINC00116Q8NCU8 138 aa13.56□□□□□ -0.24
PTCD1-201ENST00000292478 TTC8Q8TAM2 541 aa13.56□□□□□ -0.24
PTCD1-201ENST00000292478 PCSK1NQ9UHG2 260 aa13.56□□□□□ -0.24
PTCD1-201ENST00000292478 HPS5Q9UPZ3 1129 aa13.56□□□□□ -0.24
PTCD1-201ENST00000292478 FIS1Q9Y3D6 152 aa13.56□□□□□ -0.24
PTCD1-201ENST00000292478 SMAPO00193 183 aa13.56□□□□□ -0.24
PTCD1-201ENST00000292478 APOL1O14791 398 aa13.56□□□□□ -0.24
PTCD1-201ENST00000292478 HAUS5O94927 633 aa13.56□□□□□ -0.24
PTCD1-201ENST00000292478 DRP2Q13474 957 aa13.56□□□□□ -0.24
PTCD1-201ENST00000292478 ZNF677Q86XU0 584 aa13.56□□□□□ -0.24
PTCD1-201ENST00000292478 ENGASEQ8NFI3 743 aa13.56□□□□□ -0.24
PTCD1-201ENST00000292478 INTUQ9ULD6 942 aa13.56□□□□□ -0.24
PTCD1-201ENST00000292478 PPP1R12AO14974 1030 aaPredicted RBP13.55□□□□□ -0.24
PTCD1-201ENST00000292478 PPFIA2O75334 1257 aa13.55□□□□□ -0.24
PTCD1-201ENST00000292478 ITIH2P19823 946 aa13.55□□□□□ -0.24
PTCD1-201ENST00000292478 KRT17Q04695 432 aa13.55□□□□□ -0.24
PTCD1-201ENST00000292478 TRAPPC11Q7Z392 1133 aa13.55□□□□□ -0.24
PTCD1-201ENST00000292478 NDE1Q9NXR1 346 aa13.55□□□□□ -0.24
PTCD1-201ENST00000292478 NPHP3-ACAD11A0A0J9YXS1 232 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms