RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 FBXL18Q96ME1 805 aa27.94■■■□□ 2.06
U2AF1-201ENST00000291552 TSHZ2Q9NRE2 1034 aa27.94■■■□□ 2.06
U2AF1-201ENST00000291552 PRMT7Q9NVM4 692 aaPredicted RBP27.94■■■□□ 2.06
U2AF1-201ENST00000291552 STK39Q9UEW8 545 aa27.94■■■□□ 2.06
U2AF1-201ENST00000291552 ZMYM2Q9UBW7 1377 aa27.94■■■□□ 2.06
U2AF1-201ENST00000291552 CYP11B2P19099 503 aa27.93■■■□□ 2.06
U2AF1-201ENST00000291552 FAM187BQ17R55 369 aa27.93■■■□□ 2.06
U2AF1-201ENST00000291552 PRIMPOLQ96LW4 560 aa27.93■■■□□ 2.06
U2AF1-201ENST00000291552 CCDC113Q9H0I3 377 aa27.93■■■□□ 2.06
U2AF1-201ENST00000291552 KLK14Q9P0G3 267 aa27.93■■■□□ 2.06
U2AF1-201ENST00000291552 ARHGEF35A5YM69 484 aa27.92■■■□□ 2.06
U2AF1-201ENST00000291552 CENPBP07199 599 aaPredicted RBP27.92■■■□□ 2.06
U2AF1-201ENST00000291552 SIGLEC14Q08ET2 396 aa27.92■■■□□ 2.06
U2AF1-201ENST00000291552 TMC5Q6UXY8 1006 aa27.92■■■□□ 2.06
U2AF1-201ENST00000291552 CABP7Q86V35 215 aa27.92■■■□□ 2.06
U2AF1-201ENST00000291552 PPFIBP1Q86W92 1011 aa27.92■■■□□ 2.06
U2AF1-201ENST00000291552 MFSD14AQ96MC6 490 aa27.92■■■□□ 2.06
U2AF1-201ENST00000291552 RIPOR3Q96MK2 946 aa27.92■■■□□ 2.06
U2AF1-201ENST00000291552 EMILIN2Q9BXX0 1053 aa27.92■■■□□ 2.06
U2AF1-201ENST00000291552 PDZD7Q9H5P4 517 aa27.92■■■□□ 2.06
U2AF1-201ENST00000291552 MRPL17Q9NRX2 175 aaKnown RBP27.92■■■□□ 2.06
U2AF1-201ENST00000291552 USP20Q9Y2K6 914 aa27.92■■■□□ 2.06
U2AF1-201ENST00000291552 NR2E1Q9Y466 385 aa27.92■■■□□ 2.06
U2AF1-201ENST00000291552 PCDHB6Q9Y5E3 794 aa27.92■■■□□ 2.06
U2AF1-201ENST00000291552 VWA8A3KMH1 1905 aa27.91■■■□□ 2.06
U2AF1-201ENST00000291552 C2CD2LO14523 706 aa27.91■■■□□ 2.06
U2AF1-201ENST00000291552 URODP06132 367 aa27.91■■■□□ 2.06
U2AF1-201ENST00000291552 KLRC2P26717 231 aa27.91■■■□□ 2.06
U2AF1-201ENST00000291552 GNL2Q13823 731 aaKnown RBP27.91■■■□□ 2.06
U2AF1-201ENST00000291552 KIAA0319Q5VV43 1072 aa27.91■■■□□ 2.06
U2AF1-201ENST00000291552 HAUS3Q68CZ6 603 aa27.91■■■□□ 2.06
U2AF1-201ENST00000291552 ZBTB8OSQ8IWT0 167 aa27.91■■■□□ 2.06
U2AF1-201ENST00000291552 RPS6KC1Q96S38 1066 aa27.91■■■□□ 2.06
U2AF1-201ENST00000291552 CXCL16Q9H2A7 254 aa27.91■■■□□ 2.06
U2AF1-201ENST00000291552 SFXN1Q9H9B4 322 aa27.91■■■□□ 2.06
U2AF1-201ENST00000291552 POLD4Q9HCU8 107 aa27.91■■■□□ 2.06
U2AF1-201ENST00000291552 CACNG4Q9UBN1 327 aa27.91■■■□□ 2.06
U2AF1-201ENST00000291552 NOL7Q9UMY1 257 aaKnown RBP27.91■■■□□ 2.06
U2AF1-201ENST00000291552 DOCK8Q8NF50 2099 aa27.9■■■□□ 2.06
U2AF1-201ENST00000291552 MUTP22033 750 aa27.9■■■□□ 2.06
U2AF1-201ENST00000291552 CCT6AP40227 531 aaKnown RBP27.9■■■□□ 2.06
U2AF1-201ENST00000291552 HACE1Q8IYU2 909 aa27.9■■■□□ 2.06
U2AF1-201ENST00000291552 RABGGTAQ92696 567 aa27.9■■■□□ 2.06
U2AF1-201ENST00000291552 PBXIP1Q96AQ6 731 aa27.9■■■□□ 2.06
U2AF1-201ENST00000291552 KIFC3Q9BVG8 833 aa27.9■■■□□ 2.06
U2AF1-201ENST00000291552 PARP2Q9UGN5 583 aa27.9■■■□□ 2.06
U2AF1-201ENST00000291552 TEX28O15482 410 aa27.89■■■□□ 2.06
U2AF1-201ENST00000291552 PRKCBP05771 671 aa27.89■■■□□ 2.06
U2AF1-201ENST00000291552 NAMPTP43490 491 aa27.89■■■□□ 2.06
U2AF1-201ENST00000291552 GLUD2P49448 558 aa27.89■■■□□ 2.06
U2AF1-201ENST00000291552 GRIK3Q13003 919 aa27.89■■■□□ 2.06
U2AF1-201ENST00000291552 PTGDRQ13258 359 aa27.89■■■□□ 2.06
U2AF1-201ENST00000291552 GPR149Q86SP6 731 aa27.89■■■□□ 2.06
U2AF1-201ENST00000291552 IGSF22Q8N9C0 903 aa27.89■■■□□ 2.06
U2AF1-201ENST00000291552 B3GALT6Q96L58 329 aa27.89■■■□□ 2.06
U2AF1-201ENST00000291552 GPR62Q9BZJ7 368 aa27.89■■■□□ 2.06
U2AF1-201ENST00000291552 C2orf40Q9H1Z8 148 aa27.89■■■□□ 2.06
U2AF1-201ENST00000291552 BHMT2Q9H2M3 363 aa27.89■■■□□ 2.06
U2AF1-201ENST00000291552 LRWD1Q9UFC0 647 aa27.89■■■□□ 2.06
U2AF1-201ENST00000291552 DOCK6Q96HP0 2047 aa27.89■■■□□ 2.05
U2AF1-201ENST00000291552 CACNA1HO95180 2353 aa27.88■■■□□ 2.05
U2AF1-201ENST00000291552 MYH11P35749 1972 aa27.88■■■□□ 2.05
U2AF1-201ENST00000291552 DSG1Q02413 1049 aa27.88■■■□□ 2.05
U2AF1-201ENST00000291552 IL17AQ16552 155 aa27.88■■■□□ 2.05
U2AF1-201ENST00000291552 ATAT1Q5SQI0 421 aa27.88■■■□□ 2.05
U2AF1-201ENST00000291552 EEF1DP3Q658K8 133 aa27.88■■■□□ 2.05
U2AF1-201ENST00000291552 KREMEN2Q8NCW0 462 aa27.88■■■□□ 2.05
U2AF1-201ENST00000291552 PAAF1Q9BRP4 392 aa27.88■■■□□ 2.05
U2AF1-201ENST00000291552 KCNH6Q9H252 994 aa27.88■■■□□ 2.05
U2AF1-201ENST00000291552 SMOC2Q9H3U7 446 aa27.88■■■□□ 2.05
U2AF1-201ENST00000291552 RXFP1Q9HBX9 757 aa27.88■■■□□ 2.05
U2AF1-201ENST00000291552 CHST7Q9NS84 486 aa27.88■■■□□ 2.05
U2AF1-201ENST00000291552 KIAA1024Q9UPX6 916 aa27.88■■■□□ 2.05
U2AF1-201ENST00000291552 PP2D1A8MPX8 630 aa27.87■■■□□ 2.05
U2AF1-201ENST00000291552 PTGESO14684 152 aa27.87■■■□□ 2.05
U2AF1-201ENST00000291552 N4BP3O15049 544 aa27.87■■■□□ 2.05
U2AF1-201ENST00000291552 CD2BP2O95400 341 aaKnown RBP27.87■■■□□ 2.05
U2AF1-201ENST00000291552 PRPF4BQ13523 1007 aaKnown RBP27.87■■■□□ 2.05
U2AF1-201ENST00000291552 FUT10Q6P4F1 479 aa27.87■■■□□ 2.05
U2AF1-201ENST00000291552 TDRD5Q8NAT2 981 aaKnown RBP27.87■■■□□ 2.05
U2AF1-201ENST00000291552 COLEC11Q9BWP8 271 aa27.87■■■□□ 2.05
U2AF1-201ENST00000291552 MAN1C1Q9NR34 630 aa27.87■■■□□ 2.05
U2AF1-201ENST00000291552 DDX19AQ9NUU7 478 aaKnown RBP27.87■■■□□ 2.05
U2AF1-201ENST00000291552 SNTG2Q9NY99 539 aa27.87■■■□□ 2.05
U2AF1-201ENST00000291552 ACKR2O00590 384 aa27.86■■■□□ 2.05
U2AF1-201ENST00000291552 NHLH1Q02575 133 aa27.86■■■□□ 2.05
U2AF1-201ENST00000291552 RABEP1Q15276 862 aa27.86■■■□□ 2.05
U2AF1-201ENST00000291552 MAPK6Q16659 721 aa27.86■■■□□ 2.05
U2AF1-201ENST00000291552 ZBTB33Q86T24 672 aa27.86■■■□□ 2.05
U2AF1-201ENST00000291552 FBXL6Q8N531 539 aa27.86■■■□□ 2.05
U2AF1-201ENST00000291552 DEPTORQ8TB45 409 aa27.86■■■□□ 2.05
U2AF1-201ENST00000291552 SNX29Q8TEQ0 813 aa27.86■■■□□ 2.05
U2AF1-201ENST00000291552 ADAM28Q9UKQ2 775 aa27.86■■■□□ 2.05
U2AF1-201ENST00000291552 RECQL4O94761 1208 aa27.85■■■□□ 2.05
U2AF1-201ENST00000291552 BRD1O95696 1058 aa27.85■■■□□ 2.05
U2AF1-201ENST00000291552 PDGFBP01127 241 aaPredicted RBP27.85■■■□□ 2.05
U2AF1-201ENST00000291552 ASGR2P07307 311 aa27.85■■■□□ 2.05
U2AF1-201ENST00000291552 ADH1AP07327 375 aa27.85■■■□□ 2.05
U2AF1-201ENST00000291552 LIG1P18858 919 aa27.85■■■□□ 2.05
U2AF1-201ENST00000291552 PDIA5Q14554 519 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms