RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 FIGNQ5HY92 759 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 TMEM270Q6UE05 265 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 DCLK2Q8N568 766 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 DACT3Q96B18 629 aaPredicted RBP13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 SHISA4Q96DD7 197 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 INO80BQ9C086 356 aaPredicted RBP13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 THAP2Q9H0W7 228 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 PSD3Q9NYI0 1048 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 NYAP2Q9P242 653 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 GABBR1Q9UBS5 961 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 ATRNO75882 1429 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 KRT1P04264 644 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 P4HBP07237 508 aaKnown RBP13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 TSEN2Q8NCE0 465 aaKnown RBP13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 ZNF473Q8WTR7 871 aaKnown RBP13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 MAML1Q92585 1016 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 ZNF408Q9H9D4 720 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 AFG3L2Q9Y4W6 797 aa13.38□□□□□ -0.27
SLC6A1-201ENST00000287766 SKAP2O75563 359 aaPredicted RBP13.37□□□□□ -0.27
SLC6A1-201ENST00000287766 SHMT1P34896 483 aa13.37□□□□□ -0.27
SLC6A1-201ENST00000287766 TNFAIP1Q13829 316 aa13.37□□□□□ -0.27
SLC6A1-201ENST00000287766 MMEL1Q495T6 779 aa13.37□□□□□ -0.27
SLC6A1-201ENST00000287766 SWSAP1Q6NVH7 229 aa13.37□□□□□ -0.27
SLC6A1-201ENST00000287766 FAM160B2Q86V87 743 aa13.37□□□□□ -0.27
SLC6A1-201ENST00000287766 SYT2Q8N9I0 419 aaPredicted RBP13.37□□□□□ -0.27
SLC6A1-201ENST00000287766 PI4K2AQ9BTU6 479 aa13.37□□□□□ -0.27
SLC6A1-201ENST00000287766 GPRC5CQ9NQ84 441 aa13.37□□□□□ -0.27
SLC6A1-201ENST00000287766 DBR1Q9UK59 544 aaKnown RBP13.37□□□□□ -0.27
SLC6A1-201ENST00000287766 K7ERI5 159 aa13.37□□□□□ -0.27
SLC6A1-201ENST00000287766 FOXN3O00409 490 aaPredicted RBP13.37□□□□□ -0.27
SLC6A1-201ENST00000287766 MEA1Q16626 185 aa13.37□□□□□ -0.27
SLC6A1-201ENST00000287766 TRIM59Q8IWR1 403 aa13.37□□□□□ -0.27
SLC6A1-201ENST00000287766 FLAD1Q8NFF5 587 aa13.37□□□□□ -0.27
SLC6A1-201ENST00000287766 MPHOSPH6Q99547 160 aaKnown RBP13.37□□□□□ -0.27
SLC6A1-201ENST00000287766 STK33Q9BYT3 514 aa13.37□□□□□ -0.27
SLC6A1-201ENST00000287766 IKZF4Q9H2S9 585 aa13.37□□□□□ -0.27
SLC6A1-201ENST00000287766 ADAM22Q9P0K1 906 aa13.37□□□□□ -0.27
SLC6A1-201ENST00000287766 ALG6Q9Y672 507 aa13.37□□□□□ -0.27
SLC6A1-201ENST00000287766 ZNF233A6NK53 670 aa13.37□□□□□ -0.27
SLC6A1-201ENST00000287766 LRRC37BQ96QE4 947 aa13.37□□□□□ -0.27
SLC6A1-201ENST00000287766 ECT2Q9H8V3 914 aa13.37□□□□□ -0.27
SLC6A1-201ENST00000287766 BATF3Q9NR55 127 aa13.37□□□□□ -0.27
SLC6A1-201ENST00000287766 SYNGAP1Q96PV0 1343 aa13.37□□□□□ -0.27
SLC6A1-201ENST00000287766 CLDN3O15551 220 aa13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 SLIT3O75094 1523 aa13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 HSD17B3P37058 310 aa13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 CUL3Q13618 768 aa13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 THNSL1Q8IYQ7 743 aa13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 TPCN2Q8NHX9 752 aa13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 PRMT6Q96LA8 375 aaPredicted RBP13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 CALN1Q9BXU9 219 aa13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 FGFBP2Q9BYJ0 223 aa13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 TMEM39BQ9GZU3 492 aa13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 SIK3Q9Y2K2 1263 aa13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 PI4K2BG5E9Z4 385 aa13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 STAM2O75886 525 aa13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 SMARCA1P28370 1054 aa13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 MRPS9P82933 396 aaKnown RBP13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 ASPHQ12797 758 aa13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 PRAMEF18Q5VWM3 479 aa13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 DTX3LQ8TDB6 740 aa13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 LZTS1Q9Y250 596 aa13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 FAM86B1E9PN63 330 aa13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 FAM86B2P0C5J1 330 aa13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 ARP10275 920 aa13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 RHBDL3P58872 404 aa13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 ADCY2Q08462 1091 aa13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 EPHA7Q15375 998 aa13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 ECM1Q16610 540 aa13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 GRAMD4Q6IC98 578 aa13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 CPA5Q8WXQ8 436 aa13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 ZWILCHQ9H900 591 aa13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 HSPBP1Q9NZL4 362 aa13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 PPARGC1AQ9UBK2 798 aaKnown RBP13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 NALCNQ8IZF0 1738 aa13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 RGPD1P0DJD0 1748 aa13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 GPC4O75487 556 aa13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 PDE1BQ01064 536 aa13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 HHIPL2Q6UWX4 724 aa13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 AFAP1L2Q8N4X5 818 aa13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 SMYD3Q9H7B4 428 aa13.36□□□□□ -0.27
SLC6A1-201ENST00000287766 SYNJ2BP-COX16A0A087WUM0 186 aa13.35□□□□□ -0.27
SLC6A1-201ENST00000287766 MIF4GDA9UHW6 222 aaKnown RBP13.35□□□□□ -0.27
SLC6A1-201ENST00000287766 FANCGO15287 622 aa13.35□□□□□ -0.27
SLC6A1-201ENST00000287766 COMTP21964 271 aa13.35□□□□□ -0.27
SLC6A1-201ENST00000287766 SCP2P22307 547 aa13.35□□□□□ -0.27
SLC6A1-201ENST00000287766 EPHB1P54762 984 aa13.35□□□□□ -0.27
SLC6A1-201ENST00000287766 HAS1Q92839 578 aa13.35□□□□□ -0.27
SLC6A1-201ENST00000287766 MTMR9Q96QG7 549 aa13.35□□□□□ -0.27
SLC6A1-201ENST00000287766 EPN3Q9H201 632 aa13.35□□□□□ -0.27
SLC6A1-201ENST00000287766 SLITRK6Q9H5Y7 841 aa13.35□□□□□ -0.27
SLC6A1-201ENST00000287766 COX16Q9P0S2 106 aa13.35□□□□□ -0.27
SLC6A1-201ENST00000287766 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.35□□□□□ -0.27
SLC6A1-201ENST00000287766 HSPA6P17066 643 aa13.35□□□□□ -0.27
SLC6A1-201ENST00000287766 ACOT2P49753 483 aa13.35□□□□□ -0.27
SLC6A1-201ENST00000287766 BPIFB4P59827 614 aa13.35□□□□□ -0.27
SLC6A1-201ENST00000287766 KIAA1755Q5JYT7 1200 aa13.35□□□□□ -0.27
SLC6A1-201ENST00000287766 DNAJC24Q6P3W2 148 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms