RNA–Protein interactions for RNA: ENST00000283415.3

LPCAT1-201, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-201ENST00000283415 TTC7AQ9ULT0 858 aaPredicted RBP14.78□□□□□ -0.04
LPCAT1-201ENST00000283415 PEX19P40855 299 aa14.78□□□□□ -0.04
LPCAT1-201ENST00000283415 FMO5P49326 533 aa14.78□□□□□ -0.04
LPCAT1-201ENST00000283415 DR1Q01658 176 aa14.78□□□□□ -0.04
LPCAT1-201ENST00000283415 TCEAL1Q15170 157 aa14.78□□□□□ -0.04
LPCAT1-201ENST00000283415 SNRNP48Q6IEG0 339 aaKnown RBP14.78□□□□□ -0.04
LPCAT1-201ENST00000283415 C7orf43Q8WVR3 580 aa14.78□□□□□ -0.04
LPCAT1-201ENST00000283415 SLC35C1Q96A29 364 aa14.78□□□□□ -0.04
LPCAT1-201ENST00000283415 WRNIP1Q96S55 665 aa14.78□□□□□ -0.04
LPCAT1-201ENST00000283415 RLFQ13129 1914 aa14.78□□□□□ -0.04
LPCAT1-201ENST00000283415 NOP56O00567 594 aaKnown RBP14.78□□□□□ -0.04
LPCAT1-201ENST00000283415 PEX10O60683 326 aa14.78□□□□□ -0.04
LPCAT1-201ENST00000283415 ASNSP08243 561 aa14.78□□□□□ -0.04
LPCAT1-201ENST00000283415 GAP43P17677 238 aa14.78□□□□□ -0.04
LPCAT1-201ENST00000283415 LMNB1P20700 586 aa14.78□□□□□ -0.04
LPCAT1-201ENST00000283415 ERFP50548 548 aa14.78□□□□□ -0.04
LPCAT1-201ENST00000283415 VAMP7P51809 220 aa14.78□□□□□ -0.04
LPCAT1-201ENST00000283415 POU5F1Q01860 360 aaKnown RBP14.78□□□□□ -0.04
LPCAT1-201ENST00000283415 HOOK3Q86VS8 718 aa14.78□□□□□ -0.04
LPCAT1-201ENST00000283415 SUPT20HQ8NEM7 779 aa14.78□□□□□ -0.04
LPCAT1-201ENST00000283415 RAB17Q9H0T7 212 aa14.78□□□□□ -0.04
LPCAT1-201ENST00000283415 EFCC1Q9HA90 598 aa14.78□□□□□ -0.04
LPCAT1-201ENST00000283415 TRIM68Q6AZZ1 485 aa14.77□□□□□ -0.04
LPCAT1-201ENST00000283415 GADL1Q6ZQY3 521 aa14.77□□□□□ -0.04
LPCAT1-201ENST00000283415 ACTRT1Q8TDG2 376 aa14.77□□□□□ -0.04
LPCAT1-201ENST00000283415 TMEM143Q96AN5 459 aa14.77□□□□□ -0.04
LPCAT1-201ENST00000283415 NT5C1BQ96P26 610 aa14.77□□□□□ -0.04
LPCAT1-201ENST00000283415 ACCSQ96QU6 501 aa14.77□□□□□ -0.04
LPCAT1-201ENST00000283415 H0YGN5 161 aa14.77□□□□□ -0.04
LPCAT1-201ENST00000283415 HNRNPH1P31943 449 aaKnown RBP14.77□□□□□ -0.04
LPCAT1-201ENST00000283415 USP37Q86T82 979 aa14.77□□□□□ -0.04
LPCAT1-201ENST00000283415 WHAMMQ8TF30 809 aa14.77□□□□□ -0.04
LPCAT1-201ENST00000283415 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.77□□□□□ -0.043e-6■■■■■ 50.8
LPCAT1-201ENST00000283415 DHX38Q92620 1227 aaKnown RBP14.77□□□□□ -0.04
LPCAT1-201ENST00000283415 KIFAP3Q92845 792 aa14.77□□□□□ -0.04
LPCAT1-201ENST00000283415 C11orf70Q9BRQ4 267 aa14.77□□□□□ -0.04
LPCAT1-201ENST00000283415 PLVAPQ9BX97 442 aa14.77□□□□□ -0.04
LPCAT1-201ENST00000283415 NSRP1Q9H0G5 558 aaKnown RBP14.77□□□□□ -0.04
LPCAT1-201ENST00000283415 AZI2Q9H6S1 392 aa14.77□□□□□ -0.04
LPCAT1-201ENST00000283415 C1orf112Q9NSG2 853 aa14.77□□□□□ -0.04
LPCAT1-201ENST00000283415 HAUS2Q9NVX0 235 aa14.77□□□□□ -0.04
LPCAT1-201ENST00000283415 INTUQ9ULD6 942 aa14.77□□□□□ -0.04
LPCAT1-201ENST00000283415 PCDHB4Q9Y5E5 795 aa14.77□□□□□ -0.04
LPCAT1-201ENST00000283415 NFS1Q9Y697 457 aa14.77□□□□□ -0.04
LPCAT1-201ENST00000283415 BZW2Q9Y6E2 419 aaKnown RBP14.77□□□□□ -0.04
LPCAT1-201ENST00000283415 EIF3DO15371 548 aaKnown RBP eCLIP14.77□□□□□ -0.05
LPCAT1-201ENST00000283415 MUTP22033 750 aa14.77□□□□□ -0.05
LPCAT1-201ENST00000283415 RXRBP28702 533 aa14.77□□□□□ -0.05
LPCAT1-201ENST00000283415 GHRHRQ02643 423 aa14.77□□□□□ -0.05
LPCAT1-201ENST00000283415 PPP2R5CQ13362 524 aa14.77□□□□□ -0.05
LPCAT1-201ENST00000283415 FAM47EQ6ZV65 393 aa14.77□□□□□ -0.05
LPCAT1-201ENST00000283415 C1orf186Q6ZWK4 172 aa14.77□□□□□ -0.05
LPCAT1-201ENST00000283415 XXYLT1Q8NBI6 393 aa14.77□□□□□ -0.05
LPCAT1-201ENST00000283415 RNF146Q9NTX7 359 aa14.77□□□□□ -0.05
LPCAT1-201ENST00000283415 ANAPC7Q9UJX3 599 aa14.77□□□□□ -0.05
LPCAT1-201ENST00000283415 PSMD10O75832 226 aa14.76□□□□□ -0.05
LPCAT1-201ENST00000283415 MAPK4P31152 587 aa14.76□□□□□ -0.05
LPCAT1-201ENST00000283415 TFAMQ00059 246 aaKnown RBP14.76□□□□□ -0.05
LPCAT1-201ENST00000283415 TRPC3Q13507 836 aa14.76□□□□□ -0.05
LPCAT1-201ENST00000283415 MTMR3Q13615 1198 aa14.76□□□□□ -0.05
LPCAT1-201ENST00000283415 VSIG1Q86XK7 387 aa14.76□□□□□ -0.05
LPCAT1-201ENST00000283415 CBWD2Q8IUF1 395 aa14.76□□□□□ -0.05
LPCAT1-201ENST00000283415 THNSL1Q8IYQ7 743 aa14.76□□□□□ -0.05
LPCAT1-201ENST00000283415 USP38Q8NB14 1042 aa14.76□□□□□ -0.05
LPCAT1-201ENST00000283415 CPA5Q8WXQ8 436 aa14.76□□□□□ -0.05
LPCAT1-201ENST00000283415 RNF25Q96BH1 459 aaPredicted RBP14.76□□□□□ -0.05
LPCAT1-201ENST00000283415 AGTPBP1Q9UPW5 1226 aa14.76□□□□□ -0.05
LPCAT1-201ENST00000283415 ATXN2Q99700 1313 aaKnown RBP14.76□□□□□ -0.05
LPCAT1-201ENST00000283415 POC1B-GALNT4F8VUJ3 575 aa14.76□□□□□ -0.05
LPCAT1-201ENST00000283415 PI4K2BG5E9Z4 385 aa14.76□□□□□ -0.05
LPCAT1-201ENST00000283415 PIK3R2O00459 728 aa14.76□□□□□ -0.05
LPCAT1-201ENST00000283415 MMEP08473 750 aa14.76□□□□□ -0.05
LPCAT1-201ENST00000283415 MDH1P40925 334 aaKnown RBP14.76□□□□□ -0.05
LPCAT1-201ENST00000283415 PIK3CAP42336 1068 aa14.76□□□□□ -0.05
LPCAT1-201ENST00000283415 RPS6P62753 249 aaKnown RBP14.76□□□□□ -0.05
LPCAT1-201ENST00000283415 NCANO14594 1321 aa14.76□□□□□ -0.05
LPCAT1-201ENST00000283415 GMNCA6NCL1 334 aa14.76□□□□□ -0.05
LPCAT1-201ENST00000283415 MEFVO15553 781 aaPredicted RBP14.76□□□□□ -0.05
LPCAT1-201ENST00000283415 SOX5P35711 763 aa14.76□□□□□ -0.05
LPCAT1-201ENST00000283415 QARSP47897 775 aaKnown RBP14.76□□□□□ -0.05
LPCAT1-201ENST00000283415 KIAA1755Q5JYT7 1200 aa14.76□□□□□ -0.05
LPCAT1-201ENST00000283415 TTC16Q8NEE8 873 aa14.76□□□□□ -0.05
LPCAT1-201ENST00000283415 TAS2R14Q9NYV8 317 aa14.76□□□□□ -0.05
LPCAT1-201ENST00000283415 PGAP2Q9UHJ9 254 aa14.76□□□□□ -0.05
LPCAT1-201ENST00000283415 DBR1Q9UK59 544 aaKnown RBP14.76□□□□□ -0.05
LPCAT1-201ENST00000283415 KRT15P19012 456 aa14.75□□□□□ -0.05
LPCAT1-201ENST00000283415 HSD17B3P37058 310 aa14.75□□□□□ -0.05
LPCAT1-201ENST00000283415 DLG4P78352 724 aa14.75□□□□□ -0.05
LPCAT1-201ENST00000283415 CBWD6Q4V339 395 aa14.75□□□□□ -0.05
LPCAT1-201ENST00000283415 CBWD3Q5JTY5 395 aa14.75□□□□□ -0.05
LPCAT1-201ENST00000283415 CBWD5Q5RIA9 395 aa14.75□□□□□ -0.05
LPCAT1-201ENST00000283415 CIAPIN1Q6FI81 312 aa14.75□□□□□ -0.05
LPCAT1-201ENST00000283415 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.75□□□□□ -0.05
LPCAT1-201ENST00000283415 MICAL1Q8TDZ2 1067 aa14.75□□□□□ -0.05
LPCAT1-201ENST00000283415 SLC5A5Q92911 643 aa14.75□□□□□ -0.05
LPCAT1-201ENST00000283415 ACSF2Q96CM8 615 aaPredicted RBP14.75□□□□□ -0.05
LPCAT1-201ENST00000283415 WDR18Q9BV38 432 aa14.75□□□□□ -0.05
LPCAT1-201ENST00000283415 EXOC7Q9UPT5 735 aa14.75□□□□□ -0.05
LPCAT1-201ENST00000283415 CLEC11AQ9Y240 323 aa14.75□□□□□ -0.05
LPCAT1-201ENST00000283415 UBE4BO95155 1302 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms