RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 DUSP10Q9Y6W6 482 aa12.74□□□□□ -0.37
SSRP1-201ENST00000278412 TRIP11Q15643 1979 aa12.73□□□□□ -0.37
SSRP1-201ENST00000278412 A0A0B4J269 797 aa12.73□□□□□ -0.37
SSRP1-201ENST00000278412 GPR25O00155 361 aa12.73□□□□□ -0.37
SSRP1-201ENST00000278412 ARHGAP6O43182 974 aa12.73□□□□□ -0.37
SSRP1-201ENST00000278412 PSEN2P49810 448 aa12.73□□□□□ -0.37
SSRP1-201ENST00000278412 PTENP60484 403 aa12.73□□□□□ -0.37
SSRP1-201ENST00000278412 AMHR2Q16671 573 aa12.73□□□□□ -0.37
SSRP1-201ENST00000278412 ARHGAP44Q17R89 818 aa12.73□□□□□ -0.37
SSRP1-201ENST00000278412 ZNF484Q5JVG2 852 aa12.73□□□□□ -0.37
SSRP1-201ENST00000278412 DNTTIP2Q5QJE6 756 aaKnown RBP12.73□□□□□ -0.37
SSRP1-201ENST00000278412 PDXDC1Q6P996 788 aa12.73□□□□□ -0.37
SSRP1-201ENST00000278412 CACNA2D4Q7Z3S7 1137 aa12.73□□□□□ -0.37
SSRP1-201ENST00000278412 C12orf56Q8IXR9 622 aa12.73□□□□□ -0.37
SSRP1-201ENST00000278412 SCLT1Q96NL6 688 aa12.73□□□□□ -0.37
SSRP1-201ENST00000278412 ACO2Q99798 780 aaKnown RBP12.73□□□□□ -0.37
SSRP1-201ENST00000278412 ARID3AQ99856 593 aa12.73□□□□□ -0.37
SSRP1-201ENST00000278412 INTS2Q9H0H0 1204 aaKnown RBP12.73□□□□□ -0.37
SSRP1-201ENST00000278412 AP5M1Q9H0R1 490 aa12.73□□□□□ -0.37
SSRP1-201ENST00000278412 METTL14Q9HCE5 456 aaKnown RBP12.73□□□□□ -0.37
SSRP1-201ENST00000278412 EXOC7Q9UPT5 735 aa12.73□□□□□ -0.37
SSRP1-201ENST00000278412 ALDH1A1P00352 501 aa12.73□□□□□ -0.37
SSRP1-201ENST00000278412 PPP2R5AQ15172 486 aa12.73□□□□□ -0.37
SSRP1-201ENST00000278412 HGSNATQ68CP4 663 aa12.73□□□□□ -0.37
SSRP1-201ENST00000278412 GPD1LQ8N335 351 aa12.73□□□□□ -0.37
SSRP1-201ENST00000278412 GOLGA5Q8TBA6 731 aa12.73□□□□□ -0.37
SSRP1-201ENST00000278412 FBXL18Q96ME1 805 aa12.73□□□□□ -0.37
SSRP1-201ENST00000278412 MKNK1Q9BUB5 465 aa12.73□□□□□ -0.37
SSRP1-201ENST00000278412 NHEJ1Q9H9Q4 299 aaPredicted RBP12.73□□□□□ -0.37
SSRP1-201ENST00000278412 HES2Q9Y543 173 aa12.73□□□□□ -0.37
SSRP1-201ENST00000278412 KIAA0100Q14667 2235 aaKnown RBP12.72□□□□□ -0.37
SSRP1-201ENST00000278412 FECHP22830 423 aa12.72□□□□□ -0.37
SSRP1-201ENST00000278412 EIF4A3P38919 411 aaKnown RBP12.72□□□□□ -0.37
SSRP1-201ENST00000278412 MAPK6Q16659 721 aa12.72□□□□□ -0.37
SSRP1-201ENST00000278412 SV2AQ7L0J3 742 aa12.72□□□□□ -0.37
SSRP1-201ENST00000278412 SH3TC2Q8TF17 1288 aa12.72□□□□□ -0.37
SSRP1-201ENST00000278412 DHX38Q92620 1227 aaKnown RBP12.72□□□□□ -0.37
SSRP1-201ENST00000278412 GPR88Q9GZN0 384 aa12.72□□□□□ -0.37
SSRP1-201ENST00000278412 SRRDQ9UH36 339 aa12.72□□□□□ -0.37
SSRP1-201ENST00000278412 PHLPP2Q6ZVD8 1323 aa12.72□□□□□ -0.37
SSRP1-201ENST00000278412 TFRCP02786 760 aaKnown RBP12.72□□□□□ -0.37
SSRP1-201ENST00000278412 TPM1P09493 284 aa12.72□□□□□ -0.37
SSRP1-201ENST00000278412 KRT13P13646 458 aa12.72□□□□□ -0.37
SSRP1-201ENST00000278412 GPC3P51654 580 aa12.72□□□□□ -0.37
SSRP1-201ENST00000278412 GFPT1Q06210 699 aaPredicted RBP12.72□□□□□ -0.37
SSRP1-201ENST00000278412 MXD4Q14582 209 aaPredicted RBP12.72□□□□□ -0.37
SSRP1-201ENST00000278412 TMEM132AQ24JP5 1023 aa12.72□□□□□ -0.37
SSRP1-201ENST00000278412 MFSD14CQ5VZR4 134 aa12.72□□□□□ -0.37
SSRP1-201ENST00000278412 GBP6Q6ZN66 633 aa12.72□□□□□ -0.37
SSRP1-201ENST00000278412 TATDN2Q93075 761 aa12.72□□□□□ -0.37
SSRP1-201ENST00000278412 GRIN2DO15399 1336 aa12.72□□□□□ -0.37
SSRP1-201ENST00000278412 CLDN3O15551 220 aa12.71□□□□□ -0.37
SSRP1-201ENST00000278412 CYP2C9P11712 490 aa12.71□□□□□ -0.37
SSRP1-201ENST00000278412 ARF4P18085 180 aaPredicted RBP12.71□□□□□ -0.37
SSRP1-201ENST00000278412 PRPF4BQ13523 1007 aaKnown RBP12.71□□□□□ -0.37
SSRP1-201ENST00000278412 MEA1Q16626 185 aa12.71□□□□□ -0.37
SSRP1-201ENST00000278412 NBPF20Q3BBV1 942 aa12.71□□□□□ -0.37
SSRP1-201ENST00000278412 INTS8Q75QN2 995 aaKnown RBP12.71□□□□□ -0.37
SSRP1-201ENST00000278412 TCP11Q8WWU5 503 aa12.71□□□□□ -0.37
SSRP1-201ENST00000278412 MFSD14AQ96MC6 490 aa12.71□□□□□ -0.37
SSRP1-201ENST00000278412 LACRTQ9GZZ8 138 aa12.71□□□□□ -0.37
SSRP1-201ENST00000278412 FZD8Q9H461 694 aa12.71□□□□□ -0.37
SSRP1-201ENST00000278412 RBAKQ9NYW8 714 aaPredicted RBP12.71□□□□□ -0.37
SSRP1-201ENST00000278412 STYXL1Q9Y6J8 313 aa12.71□□□□□ -0.37
SSRP1-201ENST00000278412 CASP8AP2Q9UKL3 1982 aa12.71□□□□□ -0.37
SSRP1-201ENST00000278412 UMODL1Q5DID0 1318 aa12.71□□□□□ -0.37
SSRP1-201ENST00000278412 HAS3O00219 553 aa12.71□□□□□ -0.37
SSRP1-201ENST00000278412 ADAMTS4O75173 837 aa12.71□□□□□ -0.37
SSRP1-201ENST00000278412 DUSP11O75319 330 aaKnown RBP12.71□□□□□ -0.37
SSRP1-201ENST00000278412 GFPT2O94808 682 aa12.71□□□□□ -0.37
SSRP1-201ENST00000278412 GUCY2FP51841 1108 aa12.71□□□□□ -0.37
SSRP1-201ENST00000278412 ADAM17P78536 824 aa12.71□□□□□ -0.37
SSRP1-201ENST00000278412 TRIM14Q14142 442 aa12.71□□□□□ -0.37
SSRP1-201ENST00000278412 FAM47CQ5HY64 1035 aa12.71□□□□□ -0.37
SSRP1-201ENST00000278412 GDF6Q6KF10 455 aaPredicted RBP12.71□□□□□ -0.37
SSRP1-201ENST00000278412 NYAP1Q6ZVC0 841 aa12.71□□□□□ -0.37
SSRP1-201ENST00000278412 RETREG2Q8NC44 543 aa12.71□□□□□ -0.37
SSRP1-201ENST00000278412 CCDC112Q8NEF3 446 aa12.71□□□□□ -0.37
SSRP1-201ENST00000278412 WDR24Q96S15 920 aa12.71□□□□□ -0.37
SSRP1-201ENST00000278412 CDT1Q9H211 546 aa12.71□□□□□ -0.37
SSRP1-201ENST00000278412 XPNPEP3Q9NQH7 507 aa12.71□□□□□ -0.37
SSRP1-201ENST00000278412 CEP72Q9P209 647 aa12.71□□□□□ -0.37
SSRP1-201ENST00000278412 PLAGL2Q9UPG8 496 aa12.71□□□□□ -0.37
SSRP1-201ENST00000278412 CNTNAP2Q9UHC6 1331 aa12.71□□□□□ -0.38
SSRP1-201ENST00000278412 EXTL3O43909 919 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 NDUFA10O95299 355 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 CTSHP09668 335 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 CXCL8P10145 99 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 TNNT1P13805 278 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 MXI1P50539 228 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 KCNA10Q16322 511 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 ZNF568Q3ZCX4 644 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 EPC2Q52LR7 807 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 ATF7IP2Q5U623 682 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 TDRD10Q5VZ19 366 aaKnown RBP12.7□□□□□ -0.38
SSRP1-201ENST00000278412 CYP26C1Q6V0L0 522 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 PALB2Q86YC2 1186 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 TSC1Q92574 1164 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 HVCN1Q96D96 273 aa12.7□□□□□ -0.38
SSRP1-201ENST00000278412 ADAMTS10Q9H324 1103 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms