RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 EPS15P42566 896 aa9.83□□□□□ -0.84
HMGCLL1-201ENST00000274901 USP46P62068 366 aa9.83□□□□□ -0.84
HMGCLL1-201ENST00000274901 KYNUQ16719 465 aa9.83□□□□□ -0.84
HMGCLL1-201ENST00000274901 CTC1Q2NKJ3 1217 aa9.83□□□□□ -0.84
HMGCLL1-201ENST00000274901 ERFEQ4G0M1 354 aa9.83□□□□□ -0.84
HMGCLL1-201ENST00000274901 C3orf67Q6ZVT6 689 aa9.83□□□□□ -0.84
HMGCLL1-201ENST00000274901 NEK8Q86SG6 692 aa9.83□□□□□ -0.84
HMGCLL1-201ENST00000274901 KIAA0825Q8IV33 1275 aa9.83□□□□□ -0.84
HMGCLL1-201ENST00000274901 C7orf43Q8WVR3 580 aa9.83□□□□□ -0.84
HMGCLL1-201ENST00000274901 C10orf82Q8WW14 230 aa9.83□□□□□ -0.84
HMGCLL1-201ENST00000274901 DTNBP1Q96EV8 351 aa9.83□□□□□ -0.84
HMGCLL1-201ENST00000274901 SERPINB12Q96P63 405 aa9.83□□□□□ -0.84
HMGCLL1-201ENST00000274901 GBP5Q96PP8 586 aa9.83□□□□□ -0.84
HMGCLL1-201ENST00000274901 BRIP1Q9BX63 1249 aa9.83□□□□□ -0.84
HMGCLL1-201ENST00000274901 ROPN1BQ9BZX4 212 aaPredicted RBP9.83□□□□□ -0.84
HMGCLL1-201ENST00000274901 THAP2Q9H0W7 228 aa9.83□□□□□ -0.84
HMGCLL1-201ENST00000274901 ROPN1Q9HAT0 212 aaPredicted RBP9.83□□□□□ -0.84
HMGCLL1-201ENST00000274901 ETNK2Q9NVF9 386 aa9.83□□□□□ -0.84
HMGCLL1-201ENST00000274901 HSFX1Q9UBD0 423 aa9.83□□□□□ -0.84
HMGCLL1-201ENST00000274901 STOML1Q9UBI4 398 aa9.83□□□□□ -0.84
HMGCLL1-201ENST00000274901 STK17AQ9UEE5 414 aa9.83□□□□□ -0.84
HMGCLL1-201ENST00000274901 RASAL2Q9UJF2 1139 aa9.83□□□□□ -0.84
HMGCLL1-201ENST00000274901 TRAFD1O14545 582 aaPredicted RBP9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 SPAG7O75391 227 aa9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 LYNP07948 512 aa9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 MARK3P27448 753 aa9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 MKRN3Q13064 507 aaKnown RBP9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 SETDB1Q15047 1291 aa9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 NONOQ15233 471 aaKnown RBP eCLIP9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 EPHA7Q15375 998 aa9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 CCDC6Q16204 474 aa9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 TMEM119Q4V9L6 283 aa9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 PARP10Q53GL7 1025 aa9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 PLEKHG4Q58EX7 1191 aa9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 TBC1D9BQ66K14 1250 aa9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 DPY19L2Q6NUT2 758 aa9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 CROCCP2Q86T23 111 aa9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 PNMA1Q8ND90 353 aa9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 SNX29Q8TEQ0 813 aa9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 RFFLQ8WZ73 363 aa9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 PRR11Q96HE9 360 aaPredicted RBP9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 BIN2Q9UBW5 565 aaPredicted RBP9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 TRPC5Q9UL62 973 aaPredicted RBP9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 PHTF1Q9UMS5 762 aa9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 ZNF510Q9Y2H8 683 aa9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 BZW2Q9Y6E2 419 aaKnown RBP9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 hCG_2014768A0A024R1R8 64 aa9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 MAGEA13PA6NCF6 341 aa9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 TSPY2A6NKD2 308 aa9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 SKIP12755 728 aa9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 CHRNA3P32297 505 aa9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 ERFP50548 548 aa9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 GRM4Q14833 912 aa9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 SIX1Q15475 284 aaPredicted RBP9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 FOXR2Q6PJQ5 311 aa9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 MYLK4Q86YV6 388 aaPredicted RBP9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 ZC3H3Q8IXZ2 948 aaKnown RBP9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 SH3TC2Q8TF17 1288 aa9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 RHBDL2Q9NX52 303 aa9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 KANSL3Q9P2N6 904 aa9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 INTUQ9ULD6 942 aa9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 NAALADL1Q9UQQ1 740 aa9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 ZNF652Q9Y2D9 606 aa9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 STARD13Q9Y3M8 1113 aa9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 USH1CQ9Y6N9 552 aa9.82□□□□□ -0.84
HMGCLL1-201ENST00000274901 USP17L3A6NCW0 530 aa9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 USP17L4A6NCW7 530 aa9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 TMEM110-MUSTN1A8MSY1 372 aa9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 HNRNPRO43390 633 aaKnown RBP9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 EXOC3O60645 756 aa9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 ATP5HO75947 161 aa9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 NR2F2P24468 414 aa9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 HOXD13P35453 343 aa9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 LSAMPQ13449 338 aa9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 USP17L1Q7RTZ2 530 aa9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 CDK5RAP3Q96JB5 506 aa9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 FAM192AQ9GZU8 254 aa9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 BCAS3Q9H6U6 928 aa9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 ADGRA3Q8IWK6 1321 aa9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 SMCO2A6NFE2 343 aa9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 A6NJR5 290 aa9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 CETN3O15182 167 aa9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 MAPK13O15264 365 aa9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 PSMG1O95456 288 aa9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 ASMTLO95671 621 aa9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 TTLL1O95922 423 aa9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 PENKP01210 267 aaPredicted RBP9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 PYGMP11217 842 aa9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 PTPN4P29074 926 aa9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 COILP38432 576 aaPredicted RBP9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 GRIA2P42262 883 aa9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 GYG1P46976 350 aa9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 NAPAP54920 295 aa9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 SLC34A1Q06495 639 aa9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 AP1B1Q10567 949 aa9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 CALCRLQ16602 461 aa9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 DCAF17Q5H9S7 520 aaPredicted RBP9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 RASIP1Q5U651 963 aa9.81□□□□□ -0.84
HMGCLL1-201ENST00000274901 RHBDF2Q6PJF5 856 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms