RNA–Protein interactions for RNA: ENST00000273027.6

CPNE9-201, Transcript of copine family member 9, humanhuman

TSL 3

Gene CPNE9, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-201ENST00000273027 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.88□□□□□ -0.67
CPNE9-201ENST00000273027 SLC35G2Q8TBE7 412 aa10.88□□□□□ -0.67
CPNE9-201ENST00000273027 RIN2Q8WYP3 895 aaPredicted RBP10.88□□□□□ -0.67
CPNE9-201ENST00000273027 LPAR1Q92633 364 aa10.88□□□□□ -0.67
CPNE9-201ENST00000273027 ZKSCAN4Q969J2 545 aaPredicted RBP10.88□□□□□ -0.67
CPNE9-201ENST00000273027 GJA10Q969M2 543 aa10.88□□□□□ -0.67
CPNE9-201ENST00000273027 FIZ1Q96SL8 496 aa10.88□□□□□ -0.67
CPNE9-201ENST00000273027 ANKEF1Q9NU02 776 aa10.88□□□□□ -0.67
CPNE9-201ENST00000273027 TCEAL9Q9UHQ7 104 aa10.88□□□□□ -0.67
CPNE9-201ENST00000273027 ZSWIM8A7E2V4 1837 aa10.88□□□□□ -0.67
CPNE9-201ENST00000273027 SPDYE5A6NIY4 337 aa10.87□□□□□ -0.67
CPNE9-201ENST00000273027 CCDC169A6NNP5 214 aa10.87□□□□□ -0.67
CPNE9-201ENST00000273027 RSPH10B2B2RC85 870 aa10.87□□□□□ -0.67
CPNE9-201ENST00000273027 IRF6O14896 467 aa10.87□□□□□ -0.67
CPNE9-201ENST00000273027 KIAA0391O15091 583 aaKnown RBP10.87□□□□□ -0.67
CPNE9-201ENST00000273027 CLIC2O15247 247 aa10.87□□□□□ -0.67
CPNE9-201ENST00000273027 ZC3H11AO75152 810 aaKnown RBP eCLIP10.87□□□□□ -0.67
CPNE9-201ENST00000273027 GDF11O95390 407 aa10.87□□□□□ -0.67
CPNE9-201ENST00000273027 FAM107AO95990 144 aa10.87□□□□□ -0.67
CPNE9-201ENST00000273027 ICAM1P05362 532 aa10.87□□□□□ -0.67
CPNE9-201ENST00000273027 ASNSP08243 561 aa10.87□□□□□ -0.67
CPNE9-201ENST00000273027 NUDT17P0C025 328 aa10.87□□□□□ -0.67
CPNE9-201ENST00000273027 RSPH10BP0C881 870 aa10.87□□□□□ -0.67
CPNE9-201ENST00000273027 PLS3P13797 630 aa10.87□□□□□ -0.67
CPNE9-201ENST00000273027 LSP1P33241 339 aa10.87□□□□□ -0.67
CPNE9-201ENST00000273027 MAN1A1P33908 653 aa10.87□□□□□ -0.67
CPNE9-201ENST00000273027 CTNNA1P35221 906 aaKnown RBP10.87□□□□□ -0.67
CPNE9-201ENST00000273027 CASP4P49662 377 aa10.87□□□□□ -0.67
CPNE9-201ENST00000273027 VAMP7P51809 220 aa10.87□□□□□ -0.67
CPNE9-201ENST00000273027 UBXN2AP68543 259 aa10.87□□□□□ -0.67
CPNE9-201ENST00000273027 GTF2BQ00403 316 aa10.87□□□□□ -0.67
CPNE9-201ENST00000273027 POU5F1Q01860 360 aaKnown RBP10.87□□□□□ -0.67
CPNE9-201ENST00000273027 C17orf99Q6UX52 265 aa10.87□□□□□ -0.67
CPNE9-201ENST00000273027 CEP128Q6ZU80 1094 aa10.87□□□□□ -0.67
CPNE9-201ENST00000273027 MIER3Q7Z3K6 550 aa10.87□□□□□ -0.67
CPNE9-201ENST00000273027 KLHL7Q8IXQ5 586 aa10.87□□□□□ -0.67
CPNE9-201ENST00000273027 C4orf19Q8IY42 314 aa10.87□□□□□ -0.67
CPNE9-201ENST00000273027 XXYLT1Q8NBI6 393 aa10.87□□□□□ -0.67
CPNE9-201ENST00000273027 TMC2Q8TDI7 906 aa10.87□□□□□ -0.67
CPNE9-201ENST00000273027 PIK3R5Q8WYR1 880 aa10.87□□□□□ -0.67
CPNE9-201ENST00000273027 KIFAP3Q92845 792 aa10.87□□□□□ -0.67
CPNE9-201ENST00000273027 ARL8AQ96BM9 186 aa10.87□□□□□ -0.67
CPNE9-201ENST00000273027 GDAP1L1Q96MZ0 367 aa10.87□□□□□ -0.67
CPNE9-201ENST00000273027 P2RX7Q99572 595 aaKnown RBP10.87□□□□□ -0.67
CPNE9-201ENST00000273027 AGPAT1Q99943 283 aa10.87□□□□□ -0.67
CPNE9-201ENST00000273027 ERP44Q9BS26 406 aa10.87□□□□□ -0.67
CPNE9-201ENST00000273027 WDR18Q9BV38 432 aa10.87□□□□□ -0.67
CPNE9-201ENST00000273027 TMEM109Q9BVC6 243 aa10.87□□□□□ -0.67
CPNE9-201ENST00000273027 RGL1Q9NZL6 768 aa10.87□□□□□ -0.67
CPNE9-201ENST00000273027 UVRAGQ9P2Y5 699 aa10.87□□□□□ -0.67
CPNE9-201ENST00000273027 MTRF1LQ9UGC7 380 aaKnown RBP10.87□□□□□ -0.67
CPNE9-201ENST00000273027 PCYOX1Q9UHG3 505 aa10.87□□□□□ -0.67
CPNE9-201ENST00000273027 LCMT1Q9UIC8 334 aa10.87□□□□□ -0.67
CPNE9-201ENST00000273027 MTUS1Q9ULD2 1270 aa10.87□□□□□ -0.67
CPNE9-201ENST00000273027 ZBTB21Q9ULJ3 1066 aa10.87□□□□□ -0.67
CPNE9-201ENST00000273027 MYPNQ86TC9 1320 aa10.86□□□□□ -0.67
CPNE9-201ENST00000273027 DDX3YO15523 660 aaKnown RBP10.86□□□□□ -0.67
CPNE9-201ENST00000273027 MEFVO15553 781 aaPredicted RBP10.86□□□□□ -0.67
CPNE9-201ENST00000273027 PHF2O75151 1096 aa10.86□□□□□ -0.67
CPNE9-201ENST00000273027 PPFIA2O75334 1257 aa10.86□□□□□ -0.67
CPNE9-201ENST00000273027 SGPL1O95470 568 aa10.86□□□□□ -0.67
CPNE9-201ENST00000273027 FAM153BP0C7A2 387 aa10.86□□□□□ -0.67
CPNE9-201ENST00000273027 ERCC3P19447 782 aa10.86□□□□□ -0.67
CPNE9-201ENST00000273027 CTNNA2P26232 953 aa10.86□□□□□ -0.67
CPNE9-201ENST00000273027 NMT1P30419 496 aaKnown RBP10.86□□□□□ -0.67
CPNE9-201ENST00000273027 HOXA13P31271 388 aaPredicted RBP10.86□□□□□ -0.67
CPNE9-201ENST00000273027 INPP5BP32019 993 aa10.86□□□□□ -0.67
CPNE9-201ENST00000273027 HSD17B3P37058 310 aa10.86□□□□□ -0.67
CPNE9-201ENST00000273027 CCT5P48643 541 aa10.86□□□□□ -0.67
CPNE9-201ENST00000273027 JAK3P52333 1124 aa10.86□□□□□ -0.67
CPNE9-201ENST00000273027 SMTNP53814 917 aa10.86□□□□□ -0.67
CPNE9-201ENST00000273027 MFAP3P55082 362 aa10.86□□□□□ -0.67
CPNE9-201ENST00000273027 ERVK-9P63128 1117 aa10.86□□□□□ -0.67
CPNE9-201ENST00000273027 BYSLQ13895 437 aaKnown RBP10.86□□□□□ -0.67
CPNE9-201ENST00000273027 CTTNQ14247 550 aaKnown RBP10.86□□□□□ -0.67
CPNE9-201ENST00000273027 SLMAPQ14BN4 828 aa10.86□□□□□ -0.67
CPNE9-201ENST00000273027 PTGISQ16647 500 aa10.86□□□□□ -0.67
CPNE9-201ENST00000273027 CYP1B1Q16678 543 aa10.86□□□□□ -0.67
CPNE9-201ENST00000273027 FAM153CQ494X1 144 aa10.86□□□□□ -0.67
CPNE9-201ENST00000273027 EPC2Q52LR7 807 aa10.86□□□□□ -0.67
CPNE9-201ENST00000273027 CEP85LQ5SZL2 805 aa10.86□□□□□ -0.67
CPNE9-201ENST00000273027 SEL1L2Q5TEA6 688 aa10.86□□□□□ -0.67
CPNE9-201ENST00000273027 PCNX4Q63HM2 1172 aa10.86□□□□□ -0.67
CPNE9-201ENST00000273027 SYDE1Q6ZW31 735 aaPredicted RBP10.86□□□□□ -0.67
CPNE9-201ENST00000273027 Q7L0L9 218 aa10.86□□□□□ -0.67
CPNE9-201ENST00000273027 CYFIP1Q7L576 1253 aa10.86□□□□□ -0.67
CPNE9-201ENST00000273027 TMC3Q7Z5M5 1100 aa10.86□□□□□ -0.67
CPNE9-201ENST00000273027 PRPF38AQ8NAV1 312 aaKnown RBP10.86□□□□□ -0.67
CPNE9-201ENST00000273027 LNX1Q8TBB1 728 aaPredicted RBP10.86□□□□□ -0.67
CPNE9-201ENST00000273027 PIGOQ8TEQ8 1089 aa10.86□□□□□ -0.67
CPNE9-201ENST00000273027 KCNN1Q92952 543 aa10.86□□□□□ -0.67
CPNE9-201ENST00000273027 TRIM11Q96F44 468 aa10.86□□□□□ -0.67
CPNE9-201ENST00000273027 PGM2Q96G03 612 aa10.86□□□□□ -0.67
CPNE9-201ENST00000273027 WRNIP1Q96S55 665 aa10.86□□□□□ -0.67
CPNE9-201ENST00000273027 FMO2Q99518 471 aa10.86□□□□□ -0.67
CPNE9-201ENST00000273027 LXNQ9BS40 222 aa10.86□□□□□ -0.67
CPNE9-201ENST00000273027 UNC93B1Q9H1C4 597 aa10.86□□□□□ -0.67
CPNE9-201ENST00000273027 ACTR5Q9H9F9 607 aaPredicted RBP10.86□□□□□ -0.67
CPNE9-201ENST00000273027 EHD2Q9NZN4 543 aa10.86□□□□□ -0.67
CPNE9-201ENST00000273027 FAM153AQ9UHL3 310 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms