RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 RNF207Q6ZRF8 634 aa29.5■■■□□ 2.31
CBX4-201ENST00000269397 TRMT1LQ7Z2T5 733 aaKnown RBP29.5■■■□□ 2.31
CBX4-201ENST00000269397 SLC47A2Q86VL8 602 aa29.5■■■□□ 2.31
CBX4-201ENST00000269397 CBWD1Q9BRT8 395 aa29.5■■■□□ 2.31
CBX4-201ENST00000269397 AAASQ9NRG9 546 aa29.5■■■□□ 2.31
CBX4-201ENST00000269397 AHDC1Q5TGY3 1603 aaPredicted RBP29.5■■■□□ 2.31
CBX4-201ENST00000269397 K7ENM7 598 aa29.5■■■□□ 2.31
CBX4-201ENST00000269397 PPEF1O14829 653 aaPredicted RBP29.5■■■□□ 2.31
CBX4-201ENST00000269397 CYP26A1O43174 497 aa29.5■■■□□ 2.31
CBX4-201ENST00000269397 RTN2O75298 545 aa29.5■■■□□ 2.31
CBX4-201ENST00000269397 ZNF131P52739 623 aa29.5■■■□□ 2.31
CBX4-201ENST00000269397 STXBP4Q6ZWJ1 553 aa29.5■■■□□ 2.31
CBX4-201ENST00000269397 ZNF564Q8TBZ8 553 aaPredicted RBP29.5■■■□□ 2.31
CBX4-201ENST00000269397 CD101Q93033 1021 aa29.5■■■□□ 2.31
CBX4-201ENST00000269397 PWWP2AQ96N64 755 aa29.5■■■□□ 2.31
CBX4-201ENST00000269397 C8orf37Q96NL8 207 aa29.5■■■□□ 2.31
CBX4-201ENST00000269397 RPS6KC1Q96S38 1066 aa29.5■■■□□ 2.31
CBX4-201ENST00000269397 SH2D3AQ9BRG2 576 aa29.5■■■□□ 2.31
CBX4-201ENST00000269397 USP15Q9Y4E8 981 aaPredicted RBP29.5■■■□□ 2.31
CBX4-201ENST00000269397 A8MUI8 341 aa29.49■■■□□ 2.31
CBX4-201ENST00000269397 AGAP11Q8TF27 550 aa29.49■■■□□ 2.31
CBX4-201ENST00000269397 LRRC4BQ9NT99 713 aa29.49■■■□□ 2.31
CBX4-201ENST00000269397 PKD2L1Q9P0L9 805 aa29.49■■■□□ 2.31
CBX4-201ENST00000269397 PNMA3Q9UL41 463 aa29.49■■■□□ 2.31
CBX4-201ENST00000269397 TP73O15350 636 aa29.49■■■□□ 2.31
CBX4-201ENST00000269397 ECEL1O95672 775 aa29.49■■■□□ 2.31
CBX4-201ENST00000269397 MMP14P50281 582 aa29.49■■■□□ 2.31
CBX4-201ENST00000269397 VAMP7P51809 220 aa29.49■■■□□ 2.31
CBX4-201ENST00000269397 SEPT14Q6ZU15 432 aa29.49■■■□□ 2.31
CBX4-201ENST00000269397 DAW1Q8N136 415 aa29.49■■■□□ 2.31
CBX4-201ENST00000269397 EPS8L1Q8TE68 723 aa29.49■■■□□ 2.31
CBX4-201ENST00000269397 NSMCE1Q8WV22 266 aa29.49■■■□□ 2.31
CBX4-201ENST00000269397 ATG4AQ8WYN0 398 aa29.49■■■□□ 2.31
CBX4-201ENST00000269397 WNT8AQ9H1J5 351 aa29.49■■■□□ 2.31
CBX4-201ENST00000269397 HOMER3Q9NSC5 361 aa29.49■■■□□ 2.31
CBX4-201ENST00000269397 CEP83Q9Y592 693 aa29.49■■■□□ 2.31
CBX4-201ENST00000269397 EP400Q96L91 3159 aa29.49■■■□□ 2.31
CBX4-201ENST00000269397 IGF2BP3O00425 579 aaKnown RBP eCLIP29.48■■■□□ 2.31
CBX4-201ENST00000269397 CYP3A4P08684 503 aa29.48■■■□□ 2.31
CBX4-201ENST00000269397 BMP3P12645 472 aa29.48■■■□□ 2.31
CBX4-201ENST00000269397 GBP1P32455 592 aa29.48■■■□□ 2.31
CBX4-201ENST00000269397 ALDH5A1P51649 535 aaPredicted RBP29.48■■■□□ 2.31
CBX4-201ENST00000269397 PRELPP51888 382 aa29.48■■■□□ 2.31
CBX4-201ENST00000269397 VSTM1Q6UX27 236 aa29.48■■■□□ 2.31
CBX4-201ENST00000269397 MIGA2Q7L4E1 593 aa29.48■■■□□ 2.31
CBX4-201ENST00000269397 FMNL3Q8IVF7 1028 aa29.48■■■□□ 2.31
CBX4-201ENST00000269397 CRAMP1Q96RY5 1269 aa29.48■■■□□ 2.31
CBX4-201ENST00000269397 SUGT1Q9Y2Z0 365 aa29.48■■■□□ 2.31
CBX4-201ENST00000269397 G3V3G9 751 aa29.48■■■□□ 2.31
CBX4-201ENST00000269397 NQO1P15559 274 aaKnown RBP29.48■■■□□ 2.31
CBX4-201ENST00000269397 KRT17Q04695 432 aa29.48■■■□□ 2.31
CBX4-201ENST00000269397 DCAF8Q5TAQ9 597 aa29.48■■■□□ 2.31
CBX4-201ENST00000269397 PPM1KQ8N3J5 372 aa29.48■■■□□ 2.31
CBX4-201ENST00000269397 UNC45AQ9H3U1 944 aa29.48■■■□□ 2.31
CBX4-201ENST00000269397 SEL1LQ9UBV2 794 aa29.48■■■□□ 2.31
CBX4-201ENST00000269397 ASIC3Q9UHC3 531 aa29.48■■■□□ 2.31
CBX4-201ENST00000269397 TBK1Q9UHD2 729 aa29.48■■■□□ 2.31
CBX4-201ENST00000269397 TRIM33Q9UPN9 1127 aa29.48■■■□□ 2.31
CBX4-201ENST00000269397 MPP2Q14168 576 aa29.48■■■□□ 2.31
CBX4-201ENST00000269397 NAA25Q14CX7 972 aa29.48■■■□□ 2.31
CBX4-201ENST00000269397 TNIP1Q15025 636 aa29.48■■■□□ 2.31
CBX4-201ENST00000269397 PLEKHO2Q8TD55 490 aa29.48■■■□□ 2.31
CBX4-201ENST00000269397 NACC1Q96RE7 527 aa29.48■■■□□ 2.31
CBX4-201ENST00000269397 PI4KBQ9UBF8 816 aa29.48■■■□□ 2.31
CBX4-201ENST00000269397 FAM198AQ9UFP1 575 aa29.48■■■□□ 2.31
CBX4-201ENST00000269397 PRR12Q9ULL5 1215 aa29.48■■■□□ 2.31
CBX4-201ENST00000269397 STK38LQ9Y2H1 464 aa29.48■■■□□ 2.31
CBX4-201ENST00000269397 ARP10275 920 aa29.47■■■□□ 2.31
CBX4-201ENST00000269397 VPS41P49754 854 aa29.47■■■□□ 2.31
CBX4-201ENST00000269397 CYP1B1Q16678 543 aa29.47■■■□□ 2.31
CBX4-201ENST00000269397 MFSD5Q6N075 450 aa29.47■■■□□ 2.31
CBX4-201ENST00000269397 CROCCP2Q86T23 111 aa29.47■■■□□ 2.31
CBX4-201ENST00000269397 ZNF653Q96CK0 615 aa29.47■■■□□ 2.31
CBX4-201ENST00000269397 LXNQ9BS40 222 aa29.47■■■□□ 2.31
CBX4-201ENST00000269397 ARHGEF35A5YM69 484 aa29.47■■■□□ 2.31
CBX4-201ENST00000269397 ANP32DO95626 131 aa29.47■■■□□ 2.31
CBX4-201ENST00000269397 OAS1P00973 400 aaKnown RBP29.47■■■□□ 2.31
CBX4-201ENST00000269397 RRP1BQ14684 758 aaKnown RBP29.47■■■□□ 2.31
CBX4-201ENST00000269397 KYNUQ16719 465 aa29.47■■■□□ 2.31
CBX4-201ENST00000269397 ABCB5Q2M3G0 1257 aa29.47■■■□□ 2.31
CBX4-201ENST00000269397 CCDC174Q6PII3 467 aa29.47■■■□□ 2.31
CBX4-201ENST00000269397 HHIPL2Q6UWX4 724 aa29.47■■■□□ 2.31
CBX4-201ENST00000269397 RUNDC3BQ96NL0 473 aa29.47■■■□□ 2.31
CBX4-201ENST00000269397 DNAJC5Q9H3Z4 198 aa29.47■■■□□ 2.31
CBX4-201ENST00000269397 GOLGA8IPA6NC78 632 aa29.46■■■□□ 2.31
CBX4-201ENST00000269397 GOLGA8JA6NMD2 632 aa29.46■■■□□ 2.31
CBX4-201ENST00000269397 GGPS1O95749 300 aa29.46■■■□□ 2.31
CBX4-201ENST00000269397 CALCAP01258 141 aa29.46■■■□□ 2.31
CBX4-201ENST00000269397 MAP2K1Q02750 393 aaPredicted RBP29.46■■■□□ 2.31
CBX4-201ENST00000269397 PPP2R5CQ13362 524 aa29.46■■■□□ 2.31
CBX4-201ENST00000269397 C1orf220Q5T0J3 134 aa29.46■■■□□ 2.31
CBX4-201ENST00000269397 NOCTQ9UK39 431 aaKnown RBP29.46■■■□□ 2.31
CBX4-201ENST00000269397 CFAP73A6NFT4 308 aa29.46■■■□□ 2.31
CBX4-201ENST00000269397 GH2P01242 217 aa29.46■■■□□ 2.31
CBX4-201ENST00000269397 CYFIP1Q7L576 1253 aa29.46■■■□□ 2.31
CBX4-201ENST00000269397 A0A1W2PRG0 241 aa29.45■■■□□ 2.31
CBX4-201ENST00000269397 CETN1Q12798 172 aa29.45■■■□□ 2.31
CBX4-201ENST00000269397 EPC2Q52LR7 807 aa29.45■■■□□ 2.31
CBX4-201ENST00000269397 PHLDB2Q86SQ0 1253 aa29.45■■■□□ 2.31
CBX4-201ENST00000269397 NGLY1Q96IV0 654 aa29.45■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms