RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 PGBD1Q96JS3 809 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 MAF1Q9H063 256 aa6.04□□□□□ -1.44
VCAN-201ENST00000265077 ABCA6Q8N139 1617 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 SMNDC1O75940 238 aaKnown RBP eCLIP6.03□□□□□ -1.44
VCAN-201ENST00000265077 ATP6V1B1P15313 513 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 FAM160B1Q5W0V3 765 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 MARK2Q7KZI7 788 aaKnown RBP6.03□□□□□ -1.44
VCAN-201ENST00000265077 CPXCR1Q8N123 301 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 DHX38Q92620 1227 aaKnown RBP6.03□□□□□ -1.44
VCAN-201ENST00000265077 ERP27Q96DN0 273 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.03□□□□□ -1.44
VCAN-201ENST00000265077 NRKQ7Z2Y5 1582 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 ESYT2A0FGR8 921 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 PDAP1Q13442 181 aaKnown RBP6.03□□□□□ -1.44
VCAN-201ENST00000265077 AP1M1Q9BXS5 423 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 EDEM3Q9BZQ6 932 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 NRBP2Q9NSY0 501 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 ARHGEF38Q9NXL2 777 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 A0A087WWV3 80 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 CCDC22O60826 627 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 RAPH1Q70E73 1250 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 TBK1Q9UHD2 729 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 TRPC5Q9UL62 973 aaPredicted RBP6.03□□□□□ -1.44
VCAN-201ENST00000265077 ALKBH5Q6P6C2 394 aaKnown RBP6.03□□□□□ -1.44
VCAN-201ENST00000265077 FRA10AC1Q70Z53 315 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 DNAJC10Q8IXB1 793 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 ZFYVE19Q96K21 471 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 EMILIN3Q9NT22 766 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 WARS2Q9UGM6 360 aaKnown RBP6.03□□□□□ -1.44
VCAN-201ENST00000265077 FBXL5Q9UKA1 691 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 ARHGEF40Q8TER5 1519 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 SMIM31A0A1B0GVY4 71 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 SLC26A4O43511 780 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 PRPSAP2O60256 369 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 POLGP54098 1239 aaPredicted RBP6.03□□□□□ -1.44
VCAN-201ENST00000265077 ACAD11Q709F0 780 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.03□□□□□ -1.44
VCAN-201ENST00000265077 POLE3Q9NRF9 147 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 SLC5A4Q9NY91 659 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 TESPA1A2RU30 521 aaPredicted RBP6.03□□□□□ -1.44
VCAN-201ENST00000265077 H0YIN7 160 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 ALDH1B1P30837 517 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 PTGS2P35354 604 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 CYP27A1Q02318 531 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 CABLES1Q8TDN4 633 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 ALKBH8Q96BT7 664 aaKnown RBP6.03□□□□□ -1.44
VCAN-201ENST00000265077 BRD8Q9H0E9 1235 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 SENP1Q9P0U3 644 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 APOBEC2Q9Y235 224 aaKnown RBP6.03□□□□□ -1.44
VCAN-201ENST00000265077 PALM3A6NDB9 673 aaPredicted RBP6.03□□□□□ -1.44
VCAN-201ENST00000265077 PCP4L1A6NKN8 68 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 A1BGP04217 495 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 BTDP43251 543 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 MDM2Q00987 491 aaPredicted RBP6.03□□□□□ -1.44
VCAN-201ENST00000265077 TMEM63BQ5T3F8 832 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 METTL13Q8N6R0 699 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 ZNF577Q9BSK1 485 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 DDX18Q9NVP1 670 aaKnown RBP6.03□□□□□ -1.44
VCAN-201ENST00000265077 CAPN11Q9UMQ6 739 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 IVNS1ABPQ9Y6Y0 642 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 A0A1B0GW55 424 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 EME2A4GXA9 379 aaPredicted RBP6.03□□□□□ -1.44
VCAN-201ENST00000265077 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.03□□□□□ -1.44
VCAN-201ENST00000265077 O00370 1275 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 GNGT2O14610 69 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 DUX4L2P0CJ85 424 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 DUX4L3P0CJ86 424 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 DUX4L4P0CJ87 422 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 DUX4L5P0CJ88 424 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 DUX4L6P0CJ89 424 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 DUX4L7P0CJ90 424 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 CALB2P22676 271 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 CHRNA3P32297 505 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 CYTH1Q15438 398 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 WASHC2DQ5SRD0 308 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 ZIM3Q96PE6 472 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 ZNF184Q99676 751 aaPredicted RBP6.03□□□□□ -1.44
VCAN-201ENST00000265077 SLC39A3Q9BRY0 314 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 WNT8AQ9H1J5 351 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 KANSL2Q9H9L4 492 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 AS3MTQ9HBK9 375 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 BTG4Q9NY30 223 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 PPARGC1AQ9UBK2 798 aaKnown RBP6.03□□□□□ -1.44
VCAN-201ENST00000265077 DUX4Q9UBX2 424 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 GINS2Q9Y248 185 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 ZNF804BA4D1E1 1349 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 ITIH6Q6UXX5 1313 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 TMEM2Q9UHN6 1383 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 PLA2R1Q13018 1463 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 PXDNLA1KZ92 1463 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 PRLP01236 227 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 CDH3P22223 829 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 IL6STP40189 918 aaPredicted RBP6.03□□□□□ -1.44
VCAN-201ENST00000265077 MRPL28Q13084 256 aaKnown RBP6.03□□□□□ -1.44
VCAN-201ENST00000265077 PABPC4Q13310 644 aaKnown RBP eCLIP6.03□□□□□ -1.44
VCAN-201ENST00000265077 ACCSLQ4AC99 568 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 SLFN12LQ6IEE8 588 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 CCSAPQ6IQ19 270 aaPredicted RBP6.03□□□□□ -1.44
VCAN-201ENST00000265077 MTHFD1LQ6UB35 978 aa6.03□□□□□ -1.44
VCAN-201ENST00000265077 NOA1Q8NC60 698 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms