RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 ANO7Q6IWH7 933 aa13.26□□□□□ -0.29
CHMP2B-201ENST00000263780 RHBDF2Q6PJF5 856 aa13.26□□□□□ -0.29
CHMP2B-201ENST00000263780 TXNRD3Q86VQ6 643 aa13.26□□□□□ -0.29
CHMP2B-201ENST00000263780 ZFAND2BQ8WV99 257 aa13.26□□□□□ -0.29
CHMP2B-201ENST00000263780 IRS2Q9Y4H2 1338 aa13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 FAM47DPA6NHR8 397 aa13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 PEX11AO75192 247 aa13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 GAS8O95995 478 aa13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 KRT17Q04695 432 aa13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 MGAT5Q09328 741 aa13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 TBC1D9BQ66K14 1250 aa13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 CWF19L1Q69YN2 538 aaKnown RBP13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 ASAP3Q8TDY4 903 aa13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 CD101Q93033 1021 aa13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 TRAIPQ9BWF2 469 aa13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 ANO3Q9BYT9 981 aa13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 MYLK2Q9H1R3 596 aa13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 SEL1LQ9UBV2 794 aa13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 KAT6BQ8WYB5 2073 aa13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 DPPA5A6NC42 116 aa13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 ANKRD63C9JTQ0 380 aa13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 PPP1R11O60927 126 aaPredicted RBP13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 SPATA31C1P0DKV0 1188 aa13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 GZMAP12544 262 aa13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 PSMC6P62333 389 aa13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 ITPK1Q13572 414 aa13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 Q4G0T1 1027 aa13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 SGO2Q562F6 1265 aa13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 CGB2Q6NT52 195 aa13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 RGS9BPQ6ZS82 235 aa13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 ZDHHC14Q8IZN3 488 aa13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 LRRC47Q8N1G4 583 aaKnown RBP13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 RBBP8NLQ8NC74 664 aaPredicted RBP13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 PARD3BQ8TEW8 1205 aa13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 DNAJC9Q8WXX5 260 aa13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 UTP4Q969X6 686 aaKnown RBP13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 POLR3CQ9BUI4 534 aaPredicted RBP13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 DCLRE1BQ9H816 532 aa13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 DNAJC18Q9H819 358 aa13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 ARHGEF10LQ9HCE6 1279 aa13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 AAASQ9NRG9 546 aa13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 STOML1Q9UBI4 398 aa13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 NKX1-2Q9UD57 310 aaPredicted RBP13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 RABGAP1Q9Y3P9 1069 aa13.25□□□□□ -0.29
CHMP2B-201ENST00000263780 A0A1W2PRG0 241 aa13.24□□□□□ -0.29
CHMP2B-201ENST00000263780 FOXN3O00409 490 aaPredicted RBP13.24□□□□□ -0.29
CHMP2B-201ENST00000263780 MEIS1O00470 390 aa13.24□□□□□ -0.29
CHMP2B-201ENST00000263780 TRAFD1O14545 582 aaPredicted RBP13.24□□□□□ -0.29
CHMP2B-201ENST00000263780 FSCN2O14926 492 aa13.24□□□□□ -0.29
CHMP2B-201ENST00000263780 CREB1P16220 341 aa13.24□□□□□ -0.29
CHMP2B-201ENST00000263780 GCLCP48506 637 aaPredicted RBP13.24□□□□□ -0.29
CHMP2B-201ENST00000263780 SLC18A1P54219 525 aa13.24□□□□□ -0.29
CHMP2B-201ENST00000263780 SPIRE1Q08AE8 756 aa13.24□□□□□ -0.29
CHMP2B-201ENST00000263780 PTK6Q13882 451 aa13.24□□□□□ -0.29
CHMP2B-201ENST00000263780 MPP2Q14168 576 aa13.24□□□□□ -0.29
CHMP2B-201ENST00000263780 SIX1Q15475 284 aaPredicted RBP13.24□□□□□ -0.29
CHMP2B-201ENST00000263780 FAM13CQ8NE31 585 aa13.24□□□□□ -0.29
CHMP2B-201ENST00000263780 ETNPPLQ8TBG4 499 aa13.24□□□□□ -0.29
CHMP2B-201ENST00000263780 ERP27Q96DN0 273 aa13.24□□□□□ -0.29
CHMP2B-201ENST00000263780 TUBB6Q9BUF5 446 aa13.24□□□□□ -0.29
CHMP2B-201ENST00000263780 FOXP3Q9BZS1 431 aa13.24□□□□□ -0.29
CHMP2B-201ENST00000263780 MLXIPLQ9NP71 852 aa13.24□□□□□ -0.29
CHMP2B-201ENST00000263780 ANAPC5Q9UJX4 755 aa13.24□□□□□ -0.29
CHMP2B-201ENST00000263780 NAALADL1Q9UQQ1 740 aa13.24□□□□□ -0.29
CHMP2B-201ENST00000263780 TNRC6CQ9HCJ0 1690 aaKnown RBP13.24□□□□□ -0.29
CHMP2B-201ENST00000263780 ATF2P15336 505 aa13.24□□□□□ -0.29
CHMP2B-201ENST00000263780 RXRBP28702 533 aa13.24□□□□□ -0.29
CHMP2B-201ENST00000263780 KCNJ1P48048 391 aa13.24□□□□□ -0.29
CHMP2B-201ENST00000263780 MARCKSL1P49006 195 aa13.24□□□□□ -0.29
CHMP2B-201ENST00000263780 MYBPC2Q14324 1141 aa13.24□□□□□ -0.29
CHMP2B-201ENST00000263780 PDCD2Q16342 344 aaPredicted RBP13.24□□□□□ -0.29
CHMP2B-201ENST00000263780 THEMIS2Q5TEJ8 643 aa13.24□□□□□ -0.29
CHMP2B-201ENST00000263780 IRGCQ6NXR0 463 aa13.24□□□□□ -0.29
CHMP2B-201ENST00000263780 LONP2Q86WA8 852 aa13.24□□□□□ -0.29
CHMP2B-201ENST00000263780 SRRM1Q8IYB3 904 aaKnown RBP13.24□□□□□ -0.29
CHMP2B-201ENST00000263780 BHMT2Q9H2M3 363 aa13.24□□□□□ -0.29
CHMP2B-201ENST00000263780 UVRAGQ9P2Y5 699 aa13.24□□□□□ -0.29
CHMP2B-201ENST00000263780 IGKV6D-41A0A0C4DH26 115 aa13.23□□□□□ -0.29
CHMP2B-201ENST00000263780 P4HA2O15460 535 aa13.23□□□□□ -0.29
CHMP2B-201ENST00000263780 SORBS3O60504 671 aa13.23□□□□□ -0.29
CHMP2B-201ENST00000263780 GH1P01241 217 aa13.23□□□□□ -0.29
CHMP2B-201ENST00000263780 GSTA2P09210 222 aa13.23□□□□□ -0.29
CHMP2B-201ENST00000263780 INHBEP58166 350 aa13.23□□□□□ -0.29
CHMP2B-201ENST00000263780 RNASELQ05823 741 aaKnown RBP13.23□□□□□ -0.29
CHMP2B-201ENST00000263780 SPARCL1Q14515 664 aa13.23□□□□□ -0.29
CHMP2B-201ENST00000263780 KYNUQ16719 465 aa13.23□□□□□ -0.29
CHMP2B-201ENST00000263780 MUM1Q2TAK8 710 aa13.23□□□□□ -0.29
CHMP2B-201ENST00000263780 RELL1Q8IUW5 271 aa13.23□□□□□ -0.29
CHMP2B-201ENST00000263780 RPUSD2Q8IZ73 545 aaKnown RBP13.23□□□□□ -0.29
CHMP2B-201ENST00000263780 GALNT15Q8N3T1 639 aa13.23□□□□□ -0.29
CHMP2B-201ENST00000263780 MYCT1Q8N699 235 aa13.23□□□□□ -0.29
CHMP2B-201ENST00000263780 RNF217Q8TC41 542 aa13.23□□□□□ -0.29
CHMP2B-201ENST00000263780 TEKT4Q8WW24 435 aa13.23□□□□□ -0.29
CHMP2B-201ENST00000263780 FAM163AQ96GL9 167 aaPredicted RBP13.23□□□□□ -0.29
CHMP2B-201ENST00000263780 CDCA7Q9BWT1 371 aaPredicted RBP13.23□□□□□ -0.29
CHMP2B-201ENST00000263780 SAR1AQ9NR31 198 aa13.23□□□□□ -0.29
CHMP2B-201ENST00000263780 DMAC2Q9NW81 257 aa13.23□□□□□ -0.29
CHMP2B-201ENST00000263780 SENP1Q9P0U3 644 aa13.23□□□□□ -0.29
CHMP2B-201ENST00000263780 THRAP3Q9Y2W1 955 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms