RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 KPNA1P52294 538 aaPredicted RBP15.75■□□□□ 0.11
CCDC6-201ENST00000263102 GLB1LQ6UWU2 654 aa15.75■□□□□ 0.11
CCDC6-201ENST00000263102 H2AFY2Q9P0M6 372 aaPredicted RBP15.75■□□□□ 0.11
CCDC6-201ENST00000263102 PCDHB6Q9Y5E3 794 aa15.75■□□□□ 0.11
CCDC6-201ENST00000263102 ITIH6Q6UXX5 1313 aa15.75■□□□□ 0.11
CCDC6-201ENST00000263102 ADGRA2Q96PE1 1338 aa15.75■□□□□ 0.11
CCDC6-201ENST00000263102 NPHP4O75161 1426 aaPredicted RBP15.75■□□□□ 0.11
CCDC6-201ENST00000263102 H0Y626 953 aa15.74■□□□□ 0.11
CCDC6-201ENST00000263102 NMT2O60551 498 aa15.74■□□□□ 0.11
CCDC6-201ENST00000263102 MED21Q13503 144 aa15.74■□□□□ 0.11
CCDC6-201ENST00000263102 KCNB1Q14721 858 aa15.74■□□□□ 0.11
CCDC6-201ENST00000263102 E2F5Q15329 346 aa15.74■□□□□ 0.11
CCDC6-201ENST00000263102 ALKBH2Q6NS38 261 aa15.74■□□□□ 0.11
CCDC6-201ENST00000263102 DEFB128Q7Z7B8 93 aa15.74■□□□□ 0.11
CCDC6-201ENST00000263102 ZNF589Q86UQ0 364 aaPredicted RBP15.74■□□□□ 0.11
CCDC6-201ENST00000263102 PNMA8BQ9ULN7 279 aaPredicted RBP15.74■□□□□ 0.11
CCDC6-201ENST00000263102 SNX9Q9Y5X1 595 aa15.74■□□□□ 0.11
CCDC6-201ENST00000263102 SLC30A1Q9Y6M5 507 aa15.74■□□□□ 0.11
CCDC6-201ENST00000263102 IPO5O00410 1097 aaKnown RBP15.74■□□□□ 0.11
CCDC6-201ENST00000263102 CCDC15Q0P6D6 951 aa15.74■□□□□ 0.11
CCDC6-201ENST00000263102 GNASQ5JWF2 1037 aa15.74■□□□□ 0.11
CCDC6-201ENST00000263102 C10orf120Q5SQS8 335 aa15.74■□□□□ 0.11
CCDC6-201ENST00000263102 LVRNQ6Q4G3 990 aa15.74■□□□□ 0.11
CCDC6-201ENST00000263102 NUP85Q9BW27 656 aa15.74■□□□□ 0.11
CCDC6-201ENST00000263102 ZSWIM5Q9P217 1185 aa15.74■□□□□ 0.11
CCDC6-201ENST00000263102 AGAP1Q9UPQ3 857 aa15.74■□□□□ 0.11
CCDC6-201ENST00000263102 RNF103-CHMP3A0A140T963 221 aa15.74■□□□□ 0.11
CCDC6-201ENST00000263102 SH2B2O14492 632 aaPredicted RBP15.74■□□□□ 0.11
CCDC6-201ENST00000263102 PRPF3O43395 683 aaKnown RBP15.74■□□□□ 0.11
CCDC6-201ENST00000263102 KRT7P08729 469 aa15.74■□□□□ 0.11
CCDC6-201ENST00000263102 VCAM1P19320 739 aa15.74■□□□□ 0.11
CCDC6-201ENST00000263102 FSCBQ5H9T9 825 aa15.74■□□□□ 0.11
CCDC6-201ENST00000263102 ZNF746Q6NUN9 644 aaPredicted RBP15.74■□□□□ 0.11
CCDC6-201ENST00000263102 ATPAF2Q8N5M1 289 aa15.74■□□□□ 0.11
CCDC6-201ENST00000263102 SLC44A5Q8NCS7 719 aa15.74■□□□□ 0.11
CCDC6-201ENST00000263102 ZC3H15Q8WU90 426 aaKnown RBP15.74■□□□□ 0.11
CCDC6-201ENST00000263102 ELMO2Q96JJ3 720 aa15.74■□□□□ 0.11
CCDC6-201ENST00000263102 GGA3Q9NZ52 723 aa15.74■□□□□ 0.11
CCDC6-201ENST00000263102 ATP10BO94823 1461 aa15.74■□□□□ 0.11
CCDC6-201ENST00000263102 POLRMTO00411 1230 aaKnown RBP15.74■□□□□ 0.11
CCDC6-201ENST00000263102 APOL1O14791 398 aa15.74■□□□□ 0.11
CCDC6-201ENST00000263102 WBP4O75554 376 aaKnown RBP15.74■□□□□ 0.11
CCDC6-201ENST00000263102 KRT38O76015 456 aa15.74■□□□□ 0.11
CCDC6-201ENST00000263102 SFNP31947 248 aa15.74■□□□□ 0.11
CCDC6-201ENST00000263102 ZBTB17Q13105 803 aa15.74■□□□□ 0.11
CCDC6-201ENST00000263102 WDR75Q8IWA0 830 aaKnown RBP15.74■□□□□ 0.11
CCDC6-201ENST00000263102 FAM161BQ96MY7 647 aa15.74■□□□□ 0.11
CCDC6-201ENST00000263102 LXNQ9BS40 222 aa15.74■□□□□ 0.11
CCDC6-201ENST00000263102 MED4Q9NPJ6 270 aa15.74■□□□□ 0.11
CCDC6-201ENST00000263102 ZRANB2O95218 330 aaKnown RBP eCLIP15.74■□□□□ 0.11
CCDC6-201ENST00000263102 ERVK-10P10266 1014 aa15.74■□□□□ 0.11
CCDC6-201ENST00000263102 QARSP47897 775 aaKnown RBP15.74■□□□□ 0.11
CCDC6-201ENST00000263102 STAT5BP51692 787 aa15.74■□□□□ 0.11
CCDC6-201ENST00000263102 EIF2B5Q13144 721 aaKnown RBP15.74■□□□□ 0.11
CCDC6-201ENST00000263102 TBC1D1Q86TI0 1168 aaPredicted RBP15.74■□□□□ 0.11
CCDC6-201ENST00000263102 CDKL3Q8IVW4 592 aaPredicted RBP15.74■□□□□ 0.11
CCDC6-201ENST00000263102 OPTNQ96CV9 577 aa15.74■□□□□ 0.11
CCDC6-201ENST00000263102 PLEKHA8Q96JA3 519 aa15.74■□□□□ 0.11
CCDC6-201ENST00000263102 CD274Q9NZQ7 290 aa15.74■□□□□ 0.11
CCDC6-201ENST00000263102 LUC7L3O95232 432 aaKnown RBP15.73■□□□□ 0.11
CCDC6-201ENST00000263102 GH1P01241 217 aa15.73■□□□□ 0.11
CCDC6-201ENST00000263102 GSNP06396 782 aa15.73■□□□□ 0.11
CCDC6-201ENST00000263102 THPOP40225 353 aa15.73■□□□□ 0.11
CCDC6-201ENST00000263102 BCAR1P56945 870 aa15.73■□□□□ 0.11
CCDC6-201ENST00000263102 NLRP11P59045 1033 aaKnown RBP15.73■□□□□ 0.11
CCDC6-201ENST00000263102 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.73■□□□□ 0.11
CCDC6-201ENST00000263102 PAWRQ96IZ0 340 aaKnown RBP15.73■□□□□ 0.11
CCDC6-201ENST00000263102 PNKPQ96T60 521 aa15.73■□□□□ 0.11
CCDC6-201ENST00000263102 NUDT12Q9BQG2 462 aa15.73■□□□□ 0.11
CCDC6-201ENST00000263102 KLHL11Q9NVR0 708 aa15.73■□□□□ 0.11
CCDC6-201ENST00000263102 NUP160Q12769 1436 aa15.73■□□□□ 0.11
CCDC6-201ENST00000263102 SOWAHDA6NJG2 315 aa15.73■□□□□ 0.11
CCDC6-201ENST00000263102 DCDC2CA8MYV0 355 aa15.73■□□□□ 0.11
CCDC6-201ENST00000263102 TRPC1P48995 793 aa15.73■□□□□ 0.11
CCDC6-201ENST00000263102 MDM2Q00987 491 aaPredicted RBP15.73■□□□□ 0.11
CCDC6-201ENST00000263102 TXNRD1Q16881 649 aa15.73■□□□□ 0.11
CCDC6-201ENST00000263102 NUP93Q8N1F7 819 aa15.73■□□□□ 0.11
CCDC6-201ENST00000263102 ZSWIM6Q9HCJ5 1215 aa15.73■□□□□ 0.11
CCDC6-201ENST00000263102 AATKQ6ZMQ8 1374 aa15.73■□□□□ 0.11
CCDC6-201ENST00000263102 ERBB4Q15303 1308 aa15.73■□□□□ 0.11
CCDC6-201ENST00000263102 LZTS3O60299 673 aaPredicted RBP15.73■□□□□ 0.11
CCDC6-201ENST00000263102 SKAP2O75563 359 aaPredicted RBP15.73■□□□□ 0.11
CCDC6-201ENST00000263102 NR3C1P04150 777 aa15.73■□□□□ 0.11
CCDC6-201ENST00000263102 PRDX5P30044 214 aa15.73■□□□□ 0.11
CCDC6-201ENST00000263102 GUCA1AP43080 201 aaPredicted RBP15.73■□□□□ 0.11
CCDC6-201ENST00000263102 HARS2P49590 506 aaKnown RBP15.73■□□□□ 0.11
CCDC6-201ENST00000263102 HLFQ16534 295 aa15.73■□□□□ 0.11
CCDC6-201ENST00000263102 CYP4A22Q5TCH4 519 aa15.73■□□□□ 0.11
CCDC6-201ENST00000263102 SYT2Q8N9I0 419 aaPredicted RBP15.73■□□□□ 0.11
CCDC6-201ENST00000263102 CD209Q9NNX6 404 aa15.73■□□□□ 0.11
CCDC6-201ENST00000263102 IPPQ9Y573 584 aa15.73■□□□□ 0.11
CCDC6-201ENST00000263102 TMEM2Q9UHN6 1383 aa15.73■□□□□ 0.11
CCDC6-201ENST00000263102 PPP6R2O75170 966 aa15.73■□□□□ 0.11
CCDC6-201ENST00000263102 NDUFS3O75489 264 aa15.73■□□□□ 0.11
CCDC6-201ENST00000263102 CDH6P55285 790 aa15.73■□□□□ 0.11
CCDC6-201ENST00000263102 ZRANB3Q5FWF4 1079 aa15.73■□□□□ 0.11
CCDC6-201ENST00000263102 RINLQ6ZS11 566 aa15.73■□□□□ 0.11
CCDC6-201ENST00000263102 RD3Q7Z3Z2 195 aa15.73■□□□□ 0.11
CCDC6-201ENST00000263102 VN1R5Q7Z5H4 357 aa15.73■□□□□ 0.11
CCDC6-201ENST00000263102 TM6SF1Q9BZW5 370 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms