RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 LIMCH1Q9UPQ0 1083 aa13.56□□□□□ -0.24
TRAF4-202ENST00000262396 USTQ9Y2C2 406 aa13.56□□□□□ -0.24
TRAF4-202ENST00000262396 CCDC195A0A1B0GUA6 201 aa13.55□□□□□ -0.24
TRAF4-202ENST00000262396 N4BP3O15049 544 aa13.55□□□□□ -0.24
TRAF4-202ENST00000262396 BRD1O95696 1058 aa13.55□□□□□ -0.24
TRAF4-202ENST00000262396 OR52Z1P0C646 297 aa13.55□□□□□ -0.24
TRAF4-202ENST00000262396 ARL2P36404 184 aa13.55□□□□□ -0.24
TRAF4-202ENST00000262396 CREMQ03060 361 aa13.55□□□□□ -0.24
TRAF4-202ENST00000262396 PRPF4BQ13523 1007 aaKnown RBP13.55□□□□□ -0.24
TRAF4-202ENST00000262396 MAPK6Q16659 721 aa13.55□□□□□ -0.24
TRAF4-202ENST00000262396 USP41Q3LFD5 358 aa13.55□□□□□ -0.24
TRAF4-202ENST00000262396 ERICH6BQ5W0A0 696 aa13.55□□□□□ -0.24
TRAF4-202ENST00000262396 CEP57Q86XR8 500 aa13.55□□□□□ -0.24
TRAF4-202ENST00000262396 PALB2Q86YC2 1186 aa13.55□□□□□ -0.24
TRAF4-202ENST00000262396 COLGALT2Q8IYK4 626 aa13.55□□□□□ -0.24
TRAF4-202ENST00000262396 PRSS33Q8NF86 280 aa13.55□□□□□ -0.24
TRAF4-202ENST00000262396 TNFRSF25Q93038 417 aa13.55□□□□□ -0.24
TRAF4-202ENST00000262396 RAB34Q9BZG1 259 aa13.55□□□□□ -0.24
TRAF4-202ENST00000262396 NXF3Q9H4D5 531 aaKnown RBP13.55□□□□□ -0.24
TRAF4-202ENST00000262396 GPRC5CQ9NQ84 441 aa13.55□□□□□ -0.24
TRAF4-202ENST00000262396 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.55□□□□□ -0.24
TRAF4-202ENST00000262396 C5orf42Q9H799 3197 aa13.55□□□□□ -0.24
TRAF4-202ENST00000262396 WDR81Q562E7 1941 aa13.54□□□□□ -0.24
TRAF4-202ENST00000262396 INPPL1O15357 1258 aa13.54□□□□□ -0.24
TRAF4-202ENST00000262396 TEX28O15482 410 aa13.54□□□□□ -0.24
TRAF4-202ENST00000262396 B4GALT5O43286 388 aa13.54□□□□□ -0.24
TRAF4-202ENST00000262396 B4GALT3O60512 393 aa13.54□□□□□ -0.24
TRAF4-202ENST00000262396 CCT6AP40227 531 aaKnown RBP13.54□□□□□ -0.24
TRAF4-202ENST00000262396 RBM25P49756 843 aaKnown RBP13.54□□□□□ -0.24
TRAF4-202ENST00000262396 VCPP55072 806 aaKnown RBP13.54□□□□□ -0.24
TRAF4-202ENST00000262396 HMGN5P82970 282 aaKnown RBP13.54□□□□□ -0.24
TRAF4-202ENST00000262396 GRIK3Q13003 919 aa13.54□□□□□ -0.24
TRAF4-202ENST00000262396 PPP2R5AQ15172 486 aa13.54□□□□□ -0.24
TRAF4-202ENST00000262396 FUT10Q6P4F1 479 aa13.54□□□□□ -0.24
TRAF4-202ENST00000262396 C15orf39Q6ZRI6 1047 aa13.54□□□□□ -0.24
TRAF4-202ENST00000262396 CATSPER3Q86XQ3 398 aa13.54□□□□□ -0.24
TRAF4-202ENST00000262396 IFNLR1Q8IU57 520 aaPredicted RBP13.54□□□□□ -0.24
TRAF4-202ENST00000262396 RIN2Q8WYP3 895 aaPredicted RBP13.54□□□□□ -0.24
TRAF4-202ENST00000262396 SMG7Q92540 1137 aaKnown RBP13.54□□□□□ -0.24
TRAF4-202ENST00000262396 ASIC4Q96FT7 647 aa13.54□□□□□ -0.24
TRAF4-202ENST00000262396 PRIMPOLQ96LW4 560 aa13.54□□□□□ -0.24
TRAF4-202ENST00000262396 VN1R3Q9BXE9 311 aa13.54□□□□□ -0.24
TRAF4-202ENST00000262396 NFKBIZQ9BYH8 718 aa13.54□□□□□ -0.24
TRAF4-202ENST00000262396 PDGFBP01127 241 aaPredicted RBP13.53□□□□□ -0.24
TRAF4-202ENST00000262396 PRKCBP05771 671 aa13.53□□□□□ -0.24
TRAF4-202ENST00000262396 SPATA31D3P0C874 917 aa13.53□□□□□ -0.24
TRAF4-202ENST00000262396 TDGQ13569 410 aa13.53□□□□□ -0.24
TRAF4-202ENST00000262396 TTC38Q5R3I4 469 aa13.53□□□□□ -0.24
TRAF4-202ENST00000262396 POTEGQ6S5H5 508 aa13.53□□□□□ -0.24
TRAF4-202ENST00000262396 PADI6Q6TGC4 694 aa13.53□□□□□ -0.24
TRAF4-202ENST00000262396 SPATA31D4Q6ZUB0 917 aa13.53□□□□□ -0.24
TRAF4-202ENST00000262396 TAS1R1Q7RTX1 841 aa13.53□□□□□ -0.24
TRAF4-202ENST00000262396 ZSCAN31Q96LW9 406 aaPredicted RBP13.53□□□□□ -0.24
TRAF4-202ENST00000262396 MTMR9Q96QG7 549 aa13.53□□□□□ -0.24
TRAF4-202ENST00000262396 POLR3CQ9BUI4 534 aaPredicted RBP13.53□□□□□ -0.24
TRAF4-202ENST00000262396 TMEM60Q9H2L4 133 aa13.53□□□□□ -0.24
TRAF4-202ENST00000262396 FAM86C1Q9NVL1 165 aa13.53□□□□□ -0.24
TRAF4-202ENST00000262396 MARCH5Q9NX47 278 aa13.53□□□□□ -0.24
TRAF4-202ENST00000262396 MIOSQ9NXC5 875 aa13.53□□□□□ -0.24
TRAF4-202ENST00000262396 ADAM28Q9UKQ2 775 aa13.53□□□□□ -0.24
TRAF4-202ENST00000262396 STK24Q9Y6E0 443 aa13.53□□□□□ -0.24
TRAF4-202ENST00000262396 SF3B1O75533 1304 aaKnown RBP eCLIP13.53□□□□□ -0.243e-6■■■■□ 20.7
TRAF4-202ENST00000262396 A0A1B0GUA9 196 aa13.52□□□□□ -0.25
TRAF4-202ENST00000262396 H0Y858 1186 aa13.52□□□□□ -0.25
TRAF4-202ENST00000262396 MED24O75448 989 aa13.52□□□□□ -0.25
TRAF4-202ENST00000262396 THP07101 528 aa13.52□□□□□ -0.25
TRAF4-202ENST00000262396 NUBP1P53384 320 aa13.52□□□□□ -0.25
TRAF4-202ENST00000262396 DSG1Q02413 1049 aa13.52□□□□□ -0.25
TRAF4-202ENST00000262396 ORC2Q13416 577 aaPredicted RBP13.52□□□□□ -0.25
TRAF4-202ENST00000262396 HSP90AA2PQ14568 343 aaPredicted RBP13.52□□□□□ -0.25
TRAF4-202ENST00000262396 LIN9Q5TKA1 542 aa13.52□□□□□ -0.25
TRAF4-202ENST00000262396 CYP26C1Q6V0L0 522 aa13.52□□□□□ -0.25
TRAF4-202ENST00000262396 HASPINQ8TF76 798 aa13.52□□□□□ -0.25
TRAF4-202ENST00000262396 RABGGTAQ92696 567 aa13.52□□□□□ -0.25
TRAF4-202ENST00000262396 LLPHQ9BRT6 129 aaKnown RBP13.52□□□□□ -0.25
TRAF4-202ENST00000262396 FOXP1Q9H334 677 aaPredicted RBP13.52□□□□□ -0.25
TRAF4-202ENST00000262396 PLEKHA4Q9H4M7 779 aa13.52□□□□□ -0.25
TRAF4-202ENST00000262396 LRWD1Q9UFC0 647 aa13.52□□□□□ -0.25
TRAF4-202ENST00000262396 KIF3AQ9Y496 699 aa13.52□□□□□ -0.25
TRAF4-202ENST00000262396 TECTAO75443 2155 aa13.52□□□□□ -0.25
TRAF4-202ENST00000262396 CASTOR2A6NHX0 329 aa13.51□□□□□ -0.25
TRAF4-202ENST00000262396 CYP11B2P19099 503 aa13.51□□□□□ -0.25
TRAF4-202ENST00000262396 RPA1P27694 616 aa13.51□□□□□ -0.25
TRAF4-202ENST00000262396 NAMPTP43490 491 aa13.51□□□□□ -0.25
TRAF4-202ENST00000262396 DSC1Q08554 894 aa13.51□□□□□ -0.25
TRAF4-202ENST00000262396 TUSC3Q13454 348 aa13.51□□□□□ -0.25
TRAF4-202ENST00000262396 ZRSR1Q15695 479 aaKnown RBP13.51□□□□□ -0.25
TRAF4-202ENST00000262396 AMHR2Q16671 573 aa13.51□□□□□ -0.25
TRAF4-202ENST00000262396 ASTLQ6HA08 431 aaPredicted RBP13.51□□□□□ -0.25
TRAF4-202ENST00000262396 CMASQ8NFW8 434 aaPredicted RBP13.51□□□□□ -0.25
TRAF4-202ENST00000262396 B3GALT6Q96L58 329 aa13.51□□□□□ -0.25
TRAF4-202ENST00000262396 SMOC2Q9H3U7 446 aa13.51□□□□□ -0.25
TRAF4-202ENST00000262396 SH2B1Q9NRF2 756 aaPredicted RBP13.51□□□□□ -0.25
TRAF4-202ENST00000262396 SNTG2Q9NY99 539 aa13.51□□□□□ -0.25
TRAF4-202ENST00000262396 IGSF9Q9P2J2 1179 aa13.51□□□□□ -0.25
TRAF4-202ENST00000262396 POLIQ9UNA4 740 aa13.51□□□□□ -0.25
TRAF4-202ENST00000262396 GDAQ9Y2T3 454 aa13.51□□□□□ -0.25
TRAF4-202ENST00000262396 CLUHO75153 1309 aa13.5□□□□□ -0.25
TRAF4-202ENST00000262396 CCDC169A6NNP5 214 aa13.5□□□□□ -0.25
TRAF4-202ENST00000262396 WNT7AO00755 349 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms