RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 HAUS5O94927 633 aa16.98■□□□□ 0.31
PRPF40B-201ENST00000261897 BCRP11274 1271 aa16.98■□□□□ 0.31
PRPF40B-201ENST00000261897 CDK8P49336 464 aa16.98■□□□□ 0.31
PRPF40B-201ENST00000261897 TXNRD3Q86VQ6 643 aa16.98■□□□□ 0.31
PRPF40B-201ENST00000261897 CTAGE3PQ8IX95 158 aa16.98■□□□□ 0.31
PRPF40B-201ENST00000261897 DDX27Q96GQ7 796 aaKnown RBP16.98■□□□□ 0.31
PRPF40B-201ENST00000261897 CYP11B2P19099 503 aa16.98■□□□□ 0.31
PRPF40B-201ENST00000261897 PDCD2Q16342 344 aaPredicted RBP16.98■□□□□ 0.31
PRPF40B-201ENST00000261897 KHDC1Q4VXA5 237 aaKnown RBP16.98■□□□□ 0.31
PRPF40B-201ENST00000261897 NBPF5PQ86XG9 351 aaPredicted RBP16.98■□□□□ 0.31
PRPF40B-201ENST00000261897 AGGF1Q8N302 714 aaeCLIP16.98■□□□□ 0.31
PRPF40B-201ENST00000261897 PIP4K2CQ8TBX8 421 aa16.98■□□□□ 0.31
PRPF40B-201ENST00000261897 TMEM59LQ9UK28 342 aa16.98■□□□□ 0.31
PRPF40B-201ENST00000261897 PCDHA1Q9Y5I3 950 aa16.98■□□□□ 0.31
PRPF40B-201ENST00000261897 AFDNP55196 1824 aaKnown RBP16.98■□□□□ 0.31
PRPF40B-201ENST00000261897 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.98■□□□□ 0.31
PRPF40B-201ENST00000261897 FAM47DPA6NHR8 397 aa16.98■□□□□ 0.31
PRPF40B-201ENST00000261897 SRRM3A6NNA2 597 aaPredicted RBP16.98■□□□□ 0.31
PRPF40B-201ENST00000261897 DCTN3O75935 186 aa16.98■□□□□ 0.31
PRPF40B-201ENST00000261897 ENO1P06733 434 aaKnown RBP16.98■□□□□ 0.31
PRPF40B-201ENST00000261897 PHLDB3Q6NSJ2 640 aa16.98■□□□□ 0.31
PRPF40B-201ENST00000261897 ZDHHC24Q6UX98 284 aa16.98■□□□□ 0.31
PRPF40B-201ENST00000261897 NLRP9Q7RTR0 991 aa16.98■□□□□ 0.31
PRPF40B-201ENST00000261897 CCDC125Q86Z20 511 aa16.98■□□□□ 0.31
PRPF40B-201ENST00000261897 ZNF564Q8TBZ8 553 aaPredicted RBP16.98■□□□□ 0.31
PRPF40B-201ENST00000261897 CENPTQ96BT3 561 aa16.98■□□□□ 0.31
PRPF40B-201ENST00000261897 DHX36Q9H2U1 1008 aaKnown RBP16.98■□□□□ 0.31
PRPF40B-201ENST00000261897 MINPP1Q9UNW1 487 aa16.98■□□□□ 0.31
PRPF40B-201ENST00000261897 CHMP2BQ9UQN3 213 aa16.98■□□□□ 0.31
PRPF40B-201ENST00000261897 USP17L10C9JJH3 530 aa16.97■□□□□ 0.31
PRPF40B-201ENST00000261897 MAPK4P31152 587 aa16.97■□□□□ 0.31
PRPF40B-201ENST00000261897 SERPINB6P35237 376 aa16.97■□□□□ 0.31
PRPF40B-201ENST00000261897 PSMC2P35998 433 aaKnown RBP16.97■□□□□ 0.31
PRPF40B-201ENST00000261897 NOP14P78316 857 aaKnown RBP16.97■□□□□ 0.31
PRPF40B-201ENST00000261897 TEX9Q8N6V9 391 aa16.97■□□□□ 0.31
PRPF40B-201ENST00000261897 SYT2Q8N9I0 419 aaPredicted RBP16.97■□□□□ 0.31
PRPF40B-201ENST00000261897 SLC5A5Q92911 643 aa16.97■□□□□ 0.31
PRPF40B-201ENST00000261897 MOV10L1Q9BXT6 1211 aaKnown RBP16.97■□□□□ 0.31
PRPF40B-201ENST00000261897 CHST7Q9NS84 486 aa16.97■□□□□ 0.31
PRPF40B-201ENST00000261897 KLHL33A6NCF5 533 aa16.97■□□□□ 0.31
PRPF40B-201ENST00000261897 CYP26A1O43174 497 aa16.97■□□□□ 0.31
PRPF40B-201ENST00000261897 MED24O75448 989 aa16.97■□□□□ 0.31
PRPF40B-201ENST00000261897 RRP1BQ14684 758 aaKnown RBP16.97■□□□□ 0.31
PRPF40B-201ENST00000261897 DSTYKQ6XUX3 929 aa16.97■□□□□ 0.31
PRPF40B-201ENST00000261897 PASD1Q8IV76 773 aa16.97■□□□□ 0.31
PRPF40B-201ENST00000261897 RBM15Q96T37 977 aaKnown RBP eCLIP16.97■□□□□ 0.31
PRPF40B-201ENST00000261897 METTL14Q9HCE5 456 aaKnown RBP16.97■□□□□ 0.31
PRPF40B-201ENST00000261897 PPARGC1AQ9UBK2 798 aaKnown RBP16.97■□□□□ 0.31
PRPF40B-201ENST00000261897 RGPD2P0DJD1 1756 aa16.97■□□□□ 0.31
PRPF40B-201ENST00000261897 RBAK-RBAKDNI3L0D1 243 aa16.97■□□□□ 0.31
PRPF40B-201ENST00000261897 ZBTB39O15060 712 aa16.97■□□□□ 0.31
PRPF40B-201ENST00000261897 TRPA1O75762 1119 aa16.97■□□□□ 0.31
PRPF40B-201ENST00000261897 GSTT1P30711 240 aa16.97■□□□□ 0.31
PRPF40B-201ENST00000261897 VHLP40337 213 aa16.97■□□□□ 0.31
PRPF40B-201ENST00000261897 RPS8P62241 208 aaKnown RBP16.97■□□□□ 0.31
PRPF40B-201ENST00000261897 IZUMO3Q5VZ72 239 aa16.97■□□□□ 0.31
PRPF40B-201ENST00000261897 LVRNQ6Q4G3 990 aa16.97■□□□□ 0.31
PRPF40B-201ENST00000261897 KIFAP3Q92845 792 aa16.97■□□□□ 0.31
PRPF40B-201ENST00000261897 KAT5Q92993 513 aa16.97■□□□□ 0.31
PRPF40B-201ENST00000261897 DNAJC19Q96DA6 116 aa16.97■□□□□ 0.31
PRPF40B-201ENST00000261897 CYP4F11Q9HBI6 524 aa16.97■□□□□ 0.31
PRPF40B-201ENST00000261897 HEY2Q9UBP5 337 aa16.97■□□□□ 0.31
PRPF40B-201ENST00000261897 MYH7P12883 1935 aa16.96■□□□□ 0.31
PRPF40B-201ENST00000261897 TPBGLP0DKB5 382 aa16.96■□□□□ 0.31
PRPF40B-201ENST00000261897 CD58P19256 250 aa16.96■□□□□ 0.31
PRPF40B-201ENST00000261897 ATP6V1C1P21283 382 aa16.96■□□□□ 0.31
PRPF40B-201ENST00000261897 FOXN2P32314 431 aa16.96■□□□□ 0.31
PRPF40B-201ENST00000261897 BTDP43251 543 aa16.96■□□□□ 0.31
PRPF40B-201ENST00000261897 C12orf60Q5U649 245 aa16.96■□□□□ 0.31
PRPF40B-201ENST00000261897 ZBED8Q8IZ13 594 aa16.96■□□□□ 0.31
PRPF40B-201ENST00000261897 CKAP2Q8WWK9 683 aa16.96■□□□□ 0.31
PRPF40B-201ENST00000261897 ACSF2Q96CM8 615 aaPredicted RBP16.96■□□□□ 0.31
PRPF40B-201ENST00000261897 FAM84AQ96KN4 292 aa16.96■□□□□ 0.31
PRPF40B-201ENST00000261897 INTS2Q9H0H0 1204 aaKnown RBP16.96■□□□□ 0.31
PRPF40B-201ENST00000261897 ARHGEF3Q9NR81 526 aa16.96■□□□□ 0.31
PRPF40B-201ENST00000261897 RABGAP1Q9Y3P9 1069 aa16.96■□□□□ 0.31
PRPF40B-201ENST00000261897 C6orf229H3BNL8 230 aa16.96■□□□□ 0.31
PRPF40B-201ENST00000261897 H3BRJ5 948 aa16.96■□□□□ 0.31
PRPF40B-201ENST00000261897 PGM1P36871 562 aa16.96■□□□□ 0.31
PRPF40B-201ENST00000261897 POLGP54098 1239 aaPredicted RBP16.96■□□□□ 0.31
PRPF40B-201ENST00000261897 GPC5P78333 572 aa16.96■□□□□ 0.31
PRPF40B-201ENST00000261897 GRAMD1BQ3KR37 738 aa16.96■□□□□ 0.31
PRPF40B-201ENST00000261897 C3orf67Q6ZVT6 689 aa16.96■□□□□ 0.31
PRPF40B-201ENST00000261897 SPATA24Q86W54 205 aa16.96■□□□□ 0.31
PRPF40B-201ENST00000261897 MFN1Q8IWA4 741 aa16.96■□□□□ 0.31
PRPF40B-201ENST00000261897 HES6Q96HZ4 224 aa16.96■□□□□ 0.31
PRPF40B-201ENST00000261897 HOMER2Q9NSB8 354 aa16.96■□□□□ 0.31
PRPF40B-201ENST00000261897 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.96■□□□□ 0.31
PRPF40B-201ENST00000261897 NUDT17P0C025 328 aa16.96■□□□□ 0.31
PRPF40B-201ENST00000261897 ATXN3P54252 364 aaPredicted RBP16.96■□□□□ 0.31
PRPF40B-201ENST00000261897 VCX3BQ9H321 246 aa16.96■□□□□ 0.31
PRPF40B-201ENST00000261897 VCX3AQ9NNX9 186 aa16.96■□□□□ 0.31
PRPF40B-201ENST00000261897 FBXO6Q9NRD1 293 aaPredicted RBP16.96■□□□□ 0.31
PRPF40B-201ENST00000261897 ZDHHC18Q9NUE0 388 aa16.96■□□□□ 0.31
PRPF40B-201ENST00000261897 COG5Q9UP83 839 aa16.96■□□□□ 0.31
PRPF40B-201ENST00000261897 ZNF711Q9Y462 761 aa16.96■□□□□ 0.31
PRPF40B-201ENST00000261897 KDM3AQ9Y4C1 1321 aa16.96■□□□□ 0.3
PRPF40B-201ENST00000261897 CDH16O75309 829 aa16.95■□□□□ 0.3
PRPF40B-201ENST00000261897 TTLL1O95922 423 aa16.95■□□□□ 0.3
PRPF40B-201ENST00000261897 CYP19A1P11511 503 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms