RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 TMEM161BQ8NDZ6 487 aa12.72□□□□□ -0.37
PFDN1-201ENST00000261813 C7orf25Q9BPX7 421 aa12.72□□□□□ -0.37
PFDN1-201ENST00000261813 BLZF1Q9H2G9 400 aa12.72□□□□□ -0.37
PFDN1-201ENST00000261813 PRMT7Q9NVM4 692 aaPredicted RBP12.72□□□□□ -0.37
PFDN1-201ENST00000261813 RMND1Q9NWS8 449 aa12.72□□□□□ -0.37
PFDN1-201ENST00000261813 LARSQ9P2J5 1176 aaKnown RBP12.72□□□□□ -0.37
PFDN1-201ENST00000261813 USP20Q9Y2K6 914 aa12.72□□□□□ -0.37
PFDN1-201ENST00000261813 PHLPP2Q6ZVD8 1323 aa12.72□□□□□ -0.37
PFDN1-201ENST00000261813 UNC80Q8N2C7 3258 aa12.71□□□□□ -0.37
PFDN1-201ENST00000261813 ERLIN2O94905 339 aa12.71□□□□□ -0.37
PFDN1-201ENST00000261813 IDEP14735 1019 aa12.71□□□□□ -0.37
PFDN1-201ENST00000261813 ATP2A2P16615 1042 aaKnown RBP12.71□□□□□ -0.37
PFDN1-201ENST00000261813 ZSCAN20P17040 1043 aaPredicted RBP12.71□□□□□ -0.37
PFDN1-201ENST00000261813 ARF4P18085 180 aaPredicted RBP12.71□□□□□ -0.37
PFDN1-201ENST00000261813 EFNA5P52803 228 aa12.71□□□□□ -0.37
PFDN1-201ENST00000261813 CUL4BQ13620 913 aa12.71□□□□□ -0.37
PFDN1-201ENST00000261813 PCBP1Q15365 356 aaKnown RBP eCLIP12.71□□□□□ -0.376e-7■■■□□ 15.8
PFDN1-201ENST00000261813 MAPK6Q16659 721 aa12.71□□□□□ -0.37
PFDN1-201ENST00000261813 UBXN11Q5T124 520 aa12.71□□□□□ -0.37
PFDN1-201ENST00000261813 LRSAM1Q6UWE0 723 aa12.71□□□□□ -0.37
PFDN1-201ENST00000261813 FAM43BQ6ZT52 329 aaPredicted RBP12.71□□□□□ -0.37
PFDN1-201ENST00000261813 SFR1Q86XK3 245 aa12.71□□□□□ -0.37
PFDN1-201ENST00000261813 HERC6Q8IVU3 1022 aa12.71□□□□□ -0.37
PFDN1-201ENST00000261813 CRIPAKQ8N1N5 446 aa12.71□□□□□ -0.37
PFDN1-201ENST00000261813 PHOSPHO2Q8TCD6 241 aa12.71□□□□□ -0.37
PFDN1-201ENST00000261813 SMARCE1Q969G3 411 aa12.71□□□□□ -0.37
PFDN1-201ENST00000261813 TOP1MTQ969P6 601 aa12.71□□□□□ -0.37
PFDN1-201ENST00000261813 CPB2Q96IY4 423 aa12.71□□□□□ -0.37
PFDN1-201ENST00000261813 PRIMPOLQ96LW4 560 aa12.71□□□□□ -0.37
PFDN1-201ENST00000261813 GSDMAQ96QA5 445 aa12.71□□□□□ -0.37
PFDN1-201ENST00000261813 CHST12Q9NRB3 414 aa12.71□□□□□ -0.37
PFDN1-201ENST00000261813 C1orf112Q9NSG2 853 aa12.71□□□□□ -0.37
PFDN1-201ENST00000261813 CNTNAP2Q9UHC6 1331 aa12.71□□□□□ -0.38
PFDN1-201ENST00000261813 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.7□□□□□ -0.38
PFDN1-201ENST00000261813 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.7□□□□□ -0.38
PFDN1-201ENST00000261813 SYCE3A1L190 88 aa12.7□□□□□ -0.38
PFDN1-201ENST00000261813 K7ERI5 159 aa12.7□□□□□ -0.38
PFDN1-201ENST00000261813 ACKR2O00590 384 aa12.7□□□□□ -0.38
PFDN1-201ENST00000261813 MAPTP10636 758 aaKnown RBP12.7□□□□□ -0.38
PFDN1-201ENST00000261813 IBSPP21815 317 aaPredicted RBP12.7□□□□□ -0.38
PFDN1-201ENST00000261813 NMT1P30419 496 aaKnown RBP12.7□□□□□ -0.38
PFDN1-201ENST00000261813 AXLP30530 894 aa12.7□□□□□ -0.38
PFDN1-201ENST00000261813 SARSP49591 514 aaKnown RBP12.7□□□□□ -0.38
PFDN1-201ENST00000261813 RABGGTBP53611 331 aa12.7□□□□□ -0.38
PFDN1-201ENST00000261813 SMTNP53814 917 aa12.7□□□□□ -0.38
PFDN1-201ENST00000261813 ASIC1P78348 528 aa12.7□□□□□ -0.38
PFDN1-201ENST00000261813 FAM189BP81408 668 aa12.7□□□□□ -0.38
PFDN1-201ENST00000261813 NT5DC1Q5TFE4 455 aa12.7□□□□□ -0.38
PFDN1-201ENST00000261813 TWF2Q6IBS0 349 aaKnown RBP12.7□□□□□ -0.38
PFDN1-201ENST00000261813 FAM117BQ6P1L5 589 aa12.7□□□□□ -0.38
PFDN1-201ENST00000261813 SLC24A5Q71RS6 500 aa12.7□□□□□ -0.38
PFDN1-201ENST00000261813 CDR2LQ86X02 465 aaPredicted RBP12.7□□□□□ -0.38
PFDN1-201ENST00000261813 KCNN1Q92952 543 aa12.7□□□□□ -0.38
PFDN1-201ENST00000261813 PANK4Q9NVE7 773 aa12.7□□□□□ -0.38
PFDN1-201ENST00000261813 ANO10Q9NW15 660 aa12.7□□□□□ -0.38
PFDN1-201ENST00000261813 KCNG1Q9UIX4 513 aa12.7□□□□□ -0.38
PFDN1-201ENST00000261813 A0A0U1RQF3 1178 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 PVALEFA0A1B0GWK0 134 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 K7ENM7 598 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 KLRC4O43908 158 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 UPP2O95045 317 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 GJB5O95377 273 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 ATF7P17544 494 aaPredicted RBP12.69□□□□□ -0.38
PFDN1-201ENST00000261813 GAP43P17677 238 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 COASYQ13057 564 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 PRPF4BQ13523 1007 aaKnown RBP12.69□□□□□ -0.38
PFDN1-201ENST00000261813 HERC4Q5GLZ8 1057 aaPredicted RBP12.69□□□□□ -0.38
PFDN1-201ENST00000261813 CT47A1Q5JQC4 288 aaPredicted RBP12.69□□□□□ -0.38
PFDN1-201ENST00000261813 NOTUMQ6P988 496 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 HAUS6Q7Z4H7 955 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 ECHDC2Q86YB7 292 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 NPAS4Q8IUM7 802 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 FAM178BQ8IXR5 827 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 CCDC65Q8IXS2 484 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 MAFAQ8NHW3 353 aaPredicted RBP12.69□□□□□ -0.38
PFDN1-201ENST00000261813 HPS3Q969F9 1004 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 CDX2Q99626 313 aaPredicted RBP12.69□□□□□ -0.38
PFDN1-201ENST00000261813 TRAIPQ9BWF2 469 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 FGFBP2Q9BYJ0 223 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 PBX4Q9BYU1 374 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 NAT10Q9H0A0 1025 aaKnown RBP12.69□□□□□ -0.38
PFDN1-201ENST00000261813 TBC1D7Q9P0N9 293 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 SEL1LQ9UBV2 794 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 DACH1Q9UI36 760 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 COL4A6Q14031 1691 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 MYH11P35749 1972 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 A0A1B0GUA9 196 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 H0YCG3 227 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 MYOGP15173 224 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 HTRA4P83105 476 aaPredicted RBP12.69□□□□□ -0.38
PFDN1-201ENST00000261813 SMAD3P84022 425 aaKnown RBP12.69□□□□□ -0.38
PFDN1-201ENST00000261813 GTF2BQ00403 316 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 EHHADHQ08426 723 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 NCBP1Q09161 790 aaKnown RBP12.69□□□□□ -0.38
PFDN1-201ENST00000261813 STX1AQ16623 288 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 ZC2HC1CQ53FD0 456 aaPredicted RBP12.69□□□□□ -0.38
PFDN1-201ENST00000261813 EEF1DP3Q658K8 133 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 UNC13DQ70J99 1090 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 ZNF720Q7Z2F6 126 aa12.69□□□□□ -0.38
PFDN1-201ENST00000261813 ZNF598Q86UK7 904 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms