RNA–Protein interactions for RNA: ENST00000260777.14

SHTN1-201, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 5,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-201ENST00000260777 TRIML2Q8N7C3 387 aa16.84■□□□□ 0.29
SHTN1-201ENST00000260777 ZC3H15Q8WU90 426 aaKnown RBP16.84■□□□□ 0.29
SHTN1-201ENST00000260777 PSPC1Q8WXF1 523 aaKnown RBP16.84■□□□□ 0.29
SHTN1-201ENST00000260777 ARHGEF1Q92888 912 aaKnown RBP16.84■□□□□ 0.29
SHTN1-201ENST00000260777 SMG5Q9UPR3 1016 aaKnown RBP16.84■□□□□ 0.29
SHTN1-201ENST00000260777 SCP2P22307 547 aa16.84■□□□□ 0.29
SHTN1-201ENST00000260777 IL1RL1Q01638 556 aa16.84■□□□□ 0.29
SHTN1-201ENST00000260777 PDIA6Q15084 440 aa16.84■□□□□ 0.29
SHTN1-201ENST00000260777 PRPF38AQ8NAV1 312 aaKnown RBP16.84■□□□□ 0.29
SHTN1-201ENST00000260777 NOA1Q8NC60 698 aaKnown RBP16.84■□□□□ 0.29
SHTN1-201ENST00000260777 RNF139Q8WU17 664 aa16.84■□□□□ 0.29
SHTN1-201ENST00000260777 RNF146Q9NTX7 359 aa16.84■□□□□ 0.29
SHTN1-201ENST00000260777 CCDC22O60826 627 aa16.83■□□□□ 0.29
SHTN1-201ENST00000260777 APOEP02649 317 aa16.83■□□□□ 0.29
SHTN1-201ENST00000260777 CHN1P15882 459 aa16.83■□□□□ 0.29
SHTN1-201ENST00000260777 OCRLQ01968 901 aa16.83■□□□□ 0.29
SHTN1-201ENST00000260777 SWSAP1Q6NVH7 229 aa16.83■□□□□ 0.29
SHTN1-201ENST00000260777 NRBF2Q96F24 287 aa16.83■□□□□ 0.29
SHTN1-201ENST00000260777 REEP2Q9BRK0 252 aa16.83■□□□□ 0.29
SHTN1-201ENST00000260777 PITPNM2Q9BZ72 1349 aa16.83■□□□□ 0.29
SHTN1-201ENST00000260777 M0QYV0 167 aa16.83■□□□□ 0.29
SHTN1-201ENST00000260777 FXR2P51116 673 aaKnown RBP eCLIP16.83■□□□□ 0.296e-6■■■■□ 25.8
SHTN1-201ENST00000260777 NOP14P78316 857 aaKnown RBP16.83■□□□□ 0.29
SHTN1-201ENST00000260777 SNRNP48Q6IEG0 339 aaKnown RBP16.83■□□□□ 0.29
SHTN1-201ENST00000260777 PPP1R16BQ96T49 567 aa16.83■□□□□ 0.29
SHTN1-201ENST00000260777 TRIM51Q9BSJ1 452 aa16.83■□□□□ 0.29
SHTN1-201ENST00000260777 RBAKQ9NYW8 714 aaPredicted RBP16.83■□□□□ 0.29
SHTN1-201ENST00000260777 HERC5Q9UII4 1024 aaKnown RBP16.83■□□□□ 0.29
SHTN1-201ENST00000260777 KRT10P13645 584 aa16.83■□□□□ 0.28
SHTN1-201ENST00000260777 ARSEP51690 589 aa16.83■□□□□ 0.28
SHTN1-201ENST00000260777 LRRC43Q8N309 656 aa16.83■□□□□ 0.28
SHTN1-201ENST00000260777 KCTD17Q8N5Z5 321 aa16.83■□□□□ 0.28
SHTN1-201ENST00000260777 TTLL6Q8N841 843 aa16.83■□□□□ 0.28
SHTN1-201ENST00000260777 MRPL4Q9BYD3 311 aaKnown RBP16.83■□□□□ 0.28
SHTN1-201ENST00000260777 ISCUQ9H1K1 167 aa16.83■□□□□ 0.28
SHTN1-201ENST00000260777 PCSK1NQ9UHG2 260 aa16.83■□□□□ 0.28
SHTN1-201ENST00000260777 FLT1P17948 1338 aa16.83■□□□□ 0.28
SHTN1-201ENST00000260777 TCP11X1B4DZS4 312 aa16.83■□□□□ 0.28
SHTN1-201ENST00000260777 RAD51CO43502 376 aa16.83■□□□□ 0.28
SHTN1-201ENST00000260777 MYLK4Q86YV6 388 aaPredicted RBP16.83■□□□□ 0.28
SHTN1-201ENST00000260777 NUDCD3Q8IVD9 361 aa16.83■□□□□ 0.28
SHTN1-201ENST00000260777 SP8Q8IXZ3 490 aa16.83■□□□□ 0.28
SHTN1-201ENST00000260777 ZNF710Q8N1W2 664 aa16.83■□□□□ 0.28
SHTN1-201ENST00000260777 USP38Q8NB14 1042 aa16.83■□□□□ 0.28
SHTN1-201ENST00000260777 HIPK4Q8NE63 616 aa16.83■□□□□ 0.28
SHTN1-201ENST00000260777 PYGBP11216 843 aa16.83■□□□□ 0.28
SHTN1-201ENST00000260777 SCG3Q8WXD2 468 aaKnown RBP16.83■□□□□ 0.28
SHTN1-201ENST00000260777 VPS11Q9H270 941 aa16.83■□□□□ 0.28
SHTN1-201ENST00000260777 TOPORSQ9NS56 1045 aaPredicted RBP16.83■□□□□ 0.28
SHTN1-201ENST00000260777 AGO2Q9UKV8 859 aaKnown RBP16.83■□□□□ 0.28
SHTN1-201ENST00000260777 A0A0G2JLW4 131 aa16.82■□□□□ 0.28
SHTN1-201ENST00000260777 PAPOLAP51003 745 aaKnown RBP16.82■□□□□ 0.28
SHTN1-201ENST00000260777 RCOR2Q8IZ40 523 aa16.82■□□□□ 0.28
SHTN1-201ENST00000260777 KCNV2Q8TDN2 545 aa16.82■□□□□ 0.28
SHTN1-201ENST00000260777 XPO6Q96QU8 1125 aaKnown RBP16.82■□□□□ 0.28
SHTN1-201ENST00000260777 DONSONQ9NYP3 566 aa16.82■□□□□ 0.28
SHTN1-201ENST00000260777 HSPBP1Q9NZL4 362 aa16.82■□□□□ 0.28
SHTN1-201ENST00000260777 RGL1Q9NZL6 768 aa16.82■□□□□ 0.28
SHTN1-201ENST00000260777 HPSEQ9Y251 543 aa16.82■□□□□ 0.28
SHTN1-201ENST00000260777 TMEM253P0C7T8 217 aa16.82■□□□□ 0.28
SHTN1-201ENST00000260777 LSP1P33241 339 aa16.82■□□□□ 0.28
SHTN1-201ENST00000260777 HIF1AQ16665 826 aa16.82■□□□□ 0.28
SHTN1-201ENST00000260777 C16orf86Q6ZW13 317 aa16.82■□□□□ 0.28
SHTN1-201ENST00000260777 CATSPER4Q7RTX7 472 aa16.82■□□□□ 0.28
SHTN1-201ENST00000260777 ZIM3Q96PE6 472 aa16.82■□□□□ 0.28
SHTN1-201ENST00000260777 FHOD1Q9Y613 1164 aa16.82■□□□□ 0.28
SHTN1-201ENST00000260777 CDH16O75309 829 aa16.82■□□□□ 0.28
SHTN1-201ENST00000260777 KITP10721 976 aa16.82■□□□□ 0.28
SHTN1-201ENST00000260777 IREB2P48200 963 aaKnown RBP16.82■□□□□ 0.28
SHTN1-201ENST00000260777 BCAR1P56945 870 aa16.82■□□□□ 0.28
SHTN1-201ENST00000260777 LRRC23Q53EV4 343 aaPredicted RBP16.82■□□□□ 0.28
SHTN1-201ENST00000260777 HEATR6Q6AI08 1181 aaKnown RBP16.82■□□□□ 0.28
SHTN1-201ENST00000260777 DAGLBQ8NCG7 672 aa16.82■□□□□ 0.28
SHTN1-201ENST00000260777 RIN2Q8WYP3 895 aaPredicted RBP16.82■□□□□ 0.28
SHTN1-201ENST00000260777 TRABDQ9H4I3 376 aa16.82■□□□□ 0.28
SHTN1-201ENST00000260777 PPCSQ9HAB8 311 aa16.82■□□□□ 0.28
SHTN1-201ENST00000260777 PCDHA10Q9Y5I2 948 aa16.82■□□□□ 0.28
SHTN1-201ENST00000260777 SETD1BQ9UPS6 1966 aaKnown RBP16.82■□□□□ 0.28
SHTN1-201ENST00000260777 PMLP29590 882 aa16.82■□□□□ 0.28
SHTN1-201ENST00000260777 RAD23BP54727 409 aa16.82■□□□□ 0.28
SHTN1-201ENST00000260777 TEDDM1Q5T9Z0 273 aa16.82■□□□□ 0.28
SHTN1-201ENST00000260777 ABI1Q8IZP0 508 aa16.82■□□□□ 0.28
SHTN1-201ENST00000260777 FAM161BQ96MY7 647 aa16.82■□□□□ 0.28
SHTN1-201ENST00000260777 MRPL46Q9H2W6 279 aaKnown RBP16.82■□□□□ 0.28
SHTN1-201ENST00000260777 H2AFXP16104 143 aaPredicted RBP16.81■□□□□ 0.28
SHTN1-201ENST00000260777 IRAK1P51617 712 aa16.81■□□□□ 0.28
SHTN1-201ENST00000260777 GRIN1Q05586 938 aa16.81■□□□□ 0.28
SHTN1-201ENST00000260777 PDCD2Q16342 344 aaPredicted RBP16.81■□□□□ 0.28
SHTN1-201ENST00000260777 DSTYKQ6XUX3 929 aa16.81■□□□□ 0.28
SHTN1-201ENST00000260777 CCDC124Q96CT7 223 aaKnown RBP16.81■□□□□ 0.28
SHTN1-201ENST00000260777 DNAJC7Q99615 494 aa16.81■□□□□ 0.28
SHTN1-201ENST00000260777 SMYD3Q9H7B4 428 aa16.81■□□□□ 0.28
SHTN1-201ENST00000260777 NDE1Q9NXR1 346 aa16.81■□□□□ 0.28
SHTN1-201ENST00000260777 EEF1B2P24534 225 aaKnown RBP16.81■□□□□ 0.28
SHTN1-201ENST00000260777 YWHABP31946 246 aaKnown RBP16.81■□□□□ 0.28
SHTN1-201ENST00000260777 CNPY4Q8N129 248 aa16.81■□□□□ 0.28
SHTN1-201ENST00000260777 ANLNQ9NQW6 1124 aa16.81■□□□□ 0.28
SHTN1-201ENST00000260777 EIF3DO15371 548 aaKnown RBP eCLIP16.81■□□□□ 0.28
SHTN1-201ENST00000260777 ZNF189O75820 626 aaPredicted RBP16.81■□□□□ 0.28
SHTN1-201ENST00000260777 ZFXP17010 805 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms