RNA–Protein interactions for RNA: ENST00000259607.6

CCL21-201, Transcript of C-C motif chemokine ligand 21, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCL21, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21-201ENST00000259607 LIG4P49917 911 aa11.29□□□□□ -0.6
CCL21-201ENST00000259607 GRIK3Q13003 919 aa11.29□□□□□ -0.6
CCL21-201ENST00000259607 PKP1Q13835 747 aa11.29□□□□□ -0.6
CCL21-201ENST00000259607 ADGRE1Q14246 886 aa11.29□□□□□ -0.6
CCL21-201ENST00000259607 ZNF568Q3ZCX4 644 aa11.29□□□□□ -0.6
CCL21-201ENST00000259607 RESP18Q5W5W9 173 aa11.29□□□□□ -0.6
CCL21-201ENST00000259607 SLFN12LQ6IEE8 588 aa11.29□□□□□ -0.6
CCL21-201ENST00000259607 MPZL3Q6UWV2 235 aa11.29□□□□□ -0.6
CCL21-201ENST00000259607 AGMOQ6ZNB7 445 aa11.29□□□□□ -0.6
CCL21-201ENST00000259607 SMG8Q8ND04 991 aaKnown RBP11.29□□□□□ -0.6
CCL21-201ENST00000259607 LEO1Q8WVC0 666 aaPredicted RBP11.29□□□□□ -0.6
CCL21-201ENST00000259607 MRPS27Q92552 414 aaKnown RBP11.29□□□□□ -0.6
CCL21-201ENST00000259607 DDX12PQ92771 950 aa11.29□□□□□ -0.6
CCL21-201ENST00000259607 CCDC47Q96A33 483 aaKnown RBP11.29□□□□□ -0.6
CCL21-201ENST00000259607 TSPAN18Q96SJ8 248 aa11.29□□□□□ -0.6
CCL21-201ENST00000259607 CDCA3Q99618 268 aaPredicted RBP11.29□□□□□ -0.6
CCL21-201ENST00000259607 ACO2Q99798 780 aaKnown RBP11.29□□□□□ -0.6
CCL21-201ENST00000259607 KIFC3Q9BVG8 833 aa11.29□□□□□ -0.6
CCL21-201ENST00000259607 EIF2AQ9BY44 585 aaKnown RBP11.29□□□□□ -0.6
CCL21-201ENST00000259607 CWH43Q9H720 699 aa11.29□□□□□ -0.6
CCL21-201ENST00000259607 TLR9Q9NR96 1032 aa11.29□□□□□ -0.6
CCL21-201ENST00000259607 SLC38A7Q9NVC3 462 aa11.29□□□□□ -0.6
CCL21-201ENST00000259607 TBC1D13Q9NVG8 400 aa11.29□□□□□ -0.6
CCL21-201ENST00000259607 KCNH3Q9ULD8 1083 aa11.29□□□□□ -0.6
CCL21-201ENST00000259607 PCDHA7Q9UN72 937 aa11.29□□□□□ -0.6
CCL21-201ENST00000259607 CDH23Q9H251 3354 aa11.29□□□□□ -0.6
CCL21-201ENST00000259607 EPOPA6NHQ4 379 aa11.28□□□□□ -0.6
CCL21-201ENST00000259607 HNRNPDLO14979 420 aaKnown RBP11.28□□□□□ -0.6
CCL21-201ENST00000259607 IDEP14735 1019 aa11.28□□□□□ -0.6
CCL21-201ENST00000259607 GRM5P41594 1212 aa11.28□□□□□ -0.6
CCL21-201ENST00000259607 GATMP50440 423 aa11.28□□□□□ -0.6
CCL21-201ENST00000259607 BCAR1P56945 870 aa11.28□□□□□ -0.6
CCL21-201ENST00000259607 NOLC1Q14978 699 aaKnown RBP eCLIP11.28□□□□□ -0.6
CCL21-201ENST00000259607 POSTNQ15063 836 aa11.28□□□□□ -0.6
CCL21-201ENST00000259607 HERC4Q5GLZ8 1057 aaPredicted RBP11.28□□□□□ -0.6
CCL21-201ENST00000259607 CNNM4Q6P4Q7 775 aa11.28□□□□□ -0.6
CCL21-201ENST00000259607 USP49Q70CQ1 688 aa11.28□□□□□ -0.6
CCL21-201ENST00000259607 PDILTQ8N807 584 aa11.28□□□□□ -0.6
CCL21-201ENST00000259607 MICAL1Q8TDZ2 1067 aa11.28□□□□□ -0.6
CCL21-201ENST00000259607 POF1BQ8WVV4 589 aa11.28□□□□□ -0.6
CCL21-201ENST00000259607 ATXN2LQ8WWM7 1075 aaKnown RBP11.28□□□□□ -0.6
CCL21-201ENST00000259607 LPPQ93052 612 aa11.28□□□□□ -0.6
CCL21-201ENST00000259607 HLA-CQ95604 372 aa11.28□□□□□ -0.6
CCL21-201ENST00000259607 DHX58Q96C10 678 aa11.28□□□□□ -0.6
CCL21-201ENST00000259607 UROC1Q96N76 676 aa11.28□□□□□ -0.6
CCL21-201ENST00000259607 COLEC11Q9BWP8 271 aa11.28□□□□□ -0.6
CCL21-201ENST00000259607 APOL6Q9BWW8 343 aa11.28□□□□□ -0.6
CCL21-201ENST00000259607 NXF3Q9H4D5 531 aaKnown RBP11.28□□□□□ -0.6
CCL21-201ENST00000259607 TMEM206Q9H813 350 aa11.28□□□□□ -0.6
CCL21-201ENST00000259607 MRPL44Q9H9J2 332 aaKnown RBP11.28□□□□□ -0.6
CCL21-201ENST00000259607 OLFML3Q9NRN5 406 aa11.28□□□□□ -0.6
CCL21-201ENST00000259607 RNF19AQ9NV58 838 aa11.28□□□□□ -0.6
CCL21-201ENST00000259607 KBTBD4Q9NVX7 518 aa11.28□□□□□ -0.6
CCL21-201ENST00000259607 THEGQ9P2T0 379 aa11.28□□□□□ -0.6
CCL21-201ENST00000259607 TBX20Q9UMR3 447 aa11.28□□□□□ -0.6
CCL21-201ENST00000259607 FAM50BQ9Y247 325 aa11.28□□□□□ -0.6
CCL21-201ENST00000259607 FAN1Q9Y2M0 1017 aa11.28□□□□□ -0.6
CCL21-201ENST00000259607 COL6A3P12111 3177 aa11.27□□□□□ -0.6
CCL21-201ENST00000259607 A0A1W2PQ27 194 aa11.27□□□□□ -0.61
CCL21-201ENST00000259607 A0A1W2PQ64 194 aa11.27□□□□□ -0.61
CCL21-201ENST00000259607 A0A1W2PQD8 194 aa11.27□□□□□ -0.61
CCL21-201ENST00000259607 RFXAPO00287 272 aa11.27□□□□□ -0.61
CCL21-201ENST00000259607 POLR2DO15514 142 aaKnown RBP11.27□□□□□ -0.61
CCL21-201ENST00000259607 XPOTO43592 962 aaKnown RBP11.27□□□□□ -0.61
CCL21-201ENST00000259607 PIGRP01833 764 aa11.27□□□□□ -0.61
CCL21-201ENST00000259607 ITGB1P05556 798 aa11.27□□□□□ -0.61
CCL21-201ENST00000259607 THP07101 528 aa11.27□□□□□ -0.61
CCL21-201ENST00000259607 LINC00271P0C7V0 271 aa11.27□□□□□ -0.61
CCL21-201ENST00000259607 MLH1P40692 756 aa11.27□□□□□ -0.61
CCL21-201ENST00000259607 GTF2BQ00403 316 aa11.27□□□□□ -0.61
CCL21-201ENST00000259607 POU5F1Q01860 360 aaKnown RBP11.27□□□□□ -0.61
CCL21-201ENST00000259607 CREMQ03060 361 aa11.27□□□□□ -0.61
CCL21-201ENST00000259607 SMC1AQ14683 1233 aaKnown RBP11.27□□□□□ -0.61
CCL21-201ENST00000259607 PUS10Q3MIT2 529 aaKnown RBP11.27□□□□□ -0.61
CCL21-201ENST00000259607 AXDND1Q5T1B0 1012 aaPredicted RBP11.27□□□□□ -0.61
CCL21-201ENST00000259607 NT5DC1Q5TFE4 455 aa11.27□□□□□ -0.61
CCL21-201ENST00000259607 KANK3Q6NY19 840 aa11.27□□□□□ -0.61
CCL21-201ENST00000259607 ELMSAN1Q6PJG2 1045 aa11.27□□□□□ -0.61
CCL21-201ENST00000259607 SHC4Q6S5L8 630 aa11.27□□□□□ -0.61
CCL21-201ENST00000259607 LRRC55Q6ZSA7 311 aa11.27□□□□□ -0.61
CCL21-201ENST00000259607 DYMQ7RTS9 669 aa11.27□□□□□ -0.61
CCL21-201ENST00000259607 SLC39A11Q8N1S5 342 aa11.27□□□□□ -0.61
CCL21-201ENST00000259607 SPPL3Q8TCT6 385 aa11.27□□□□□ -0.61
CCL21-201ENST00000259607 PPM1EQ8WY54 764 aa11.27□□□□□ -0.61
CCL21-201ENST00000259607 ACAP3Q96P50 834 aa11.27□□□□□ -0.61
CCL21-201ENST00000259607 GAD1Q99259 594 aa11.27□□□□□ -0.61
CCL21-201ENST00000259607 PANK2Q9BZ23 570 aa11.27□□□□□ -0.61
CCL21-201ENST00000259607 GBP3Q9H0R5 595 aa11.27□□□□□ -0.61
CCL21-201ENST00000259607 PLEKHA5Q9HAU0 1116 aa11.27□□□□□ -0.61
CCL21-201ENST00000259607 ALG13Q9NP73 1137 aaKnown RBP11.27□□□□□ -0.61
CCL21-201ENST00000259607 ENTPD7Q9NQZ7 604 aa11.27□□□□□ -0.61
CCL21-201ENST00000259607 PANK4Q9NVE7 773 aa11.27□□□□□ -0.61
CCL21-201ENST00000259607 HOOK1Q9UJC3 728 aaKnown RBP11.27□□□□□ -0.61
CCL21-201ENST00000259607 FNDC1Q4ZHG4 1894 aaPredicted RBP11.27□□□□□ -0.61
CCL21-201ENST00000259607 NLRC5Q86WI3 1866 aa11.27□□□□□ -0.61
CCL21-201ENST00000259607 MYO9BQ13459 2157 aa11.27□□□□□ -0.61
CCL21-201ENST00000259607 NPHP3-ACAD11A0A0J9YXS1 232 aa11.26□□□□□ -0.61
CCL21-201ENST00000259607 MYMKA6NI61 221 aa11.26□□□□□ -0.61
CCL21-201ENST00000259607 KIAA0391O15091 583 aaKnown RBP11.26□□□□□ -0.61
CCL21-201ENST00000259607 GRM6O15303 877 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms