RNA–Protein interactions for RNA: ENST00000257904.10

CDK4-201, Transcript of cyclin dependent kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK4, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-201ENST00000257904 CCDC113Q9H0I3 377 aa18.22■□□□□ 0.51
CDK4-201ENST00000257904 ROPN1Q9HAT0 212 aaPredicted RBP18.22■□□□□ 0.51
CDK4-201ENST00000257904 CHORDC1Q9UHD1 332 aaPredicted RBP18.22■□□□□ 0.51
CDK4-201ENST00000257904 DBR1Q9UK59 544 aaKnown RBP18.22■□□□□ 0.51
CDK4-201ENST00000257904 PTPN22Q9Y2R2 807 aa18.22■□□□□ 0.51
CDK4-201ENST00000257904 RBBP6Q7Z6E9 1792 aaKnown RBP18.22■□□□□ 0.51
CDK4-201ENST00000257904 PASKQ96RG2 1323 aa18.22■□□□□ 0.51
CDK4-201ENST00000257904 CFAP73A6NFT4 308 aa18.22■□□□□ 0.51
CDK4-201ENST00000257904 GAS7O60861 476 aa18.22■□□□□ 0.51
CDK4-201ENST00000257904 IBSPP21815 317 aaPredicted RBP18.22■□□□□ 0.51
CDK4-201ENST00000257904 CETN1Q12798 172 aa18.22■□□□□ 0.51
CDK4-201ENST00000257904 SIX1Q15475 284 aaPredicted RBP18.22■□□□□ 0.51
CDK4-201ENST00000257904 STRIP1Q5VSL9 837 aa18.22■□□□□ 0.51
CDK4-201ENST00000257904 EXOC3L1Q86VI1 746 aa18.22■□□□□ 0.51
CDK4-201ENST00000257904 ZDHHC15Q96MV8 337 aa18.22■□□□□ 0.51
CDK4-201ENST00000257904 PCDHB18PQ96TA0 734 aa18.22■□□□□ 0.51
CDK4-201ENST00000257904 ATP6V0A4Q9HBG4 840 aa18.22■□□□□ 0.51
CDK4-201ENST00000257904 BCS1LQ9Y276 419 aa18.22■□□□□ 0.51
CDK4-201ENST00000257904 PCDHAC2Q9Y5I4 1007 aa18.22■□□□□ 0.51
CDK4-201ENST00000257904 SNX3O60493 162 aa18.21■□□□□ 0.51
CDK4-201ENST00000257904 GDF11O95390 407 aa18.21■□□□□ 0.51
CDK4-201ENST00000257904 OAS1P00973 400 aaKnown RBP18.21■□□□□ 0.51
CDK4-201ENST00000257904 RARAP10276 462 aa18.21■□□□□ 0.51
CDK4-201ENST00000257904 PDE6CP51160 858 aa18.21■□□□□ 0.51
CDK4-201ENST00000257904 RBM5P52756 815 aaKnown RBP eCLIP18.21■□□□□ 0.51
CDK4-201ENST00000257904 AOC3Q16853 763 aa18.21■□□□□ 0.51
CDK4-201ENST00000257904 ZNF568Q3ZCX4 644 aa18.21■□□□□ 0.51
CDK4-201ENST00000257904 CCDC38Q502W7 563 aa18.21■□□□□ 0.51
CDK4-201ENST00000257904 EPC2Q52LR7 807 aa18.21■□□□□ 0.51
CDK4-201ENST00000257904 FAM133BQ5BKY9 247 aaKnown RBP18.21■□□□□ 0.51
CDK4-201ENST00000257904 INTS8Q75QN2 995 aaKnown RBP18.21■□□□□ 0.51
CDK4-201ENST00000257904 TRMT10CQ7L0Y3 403 aaKnown RBP18.21■□□□□ 0.51
CDK4-201ENST00000257904 SH3BP5LQ7L8J4 393 aa18.21■□□□□ 0.51
CDK4-201ENST00000257904 C12orf50Q8NA57 414 aaPredicted RBP18.21■□□□□ 0.51
CDK4-201ENST00000257904 HOMER3Q9NSC5 361 aa18.21■□□□□ 0.51
CDK4-201ENST00000257904 ABCF3Q9NUQ8 709 aa18.21■□□□□ 0.51
CDK4-201ENST00000257904 FAM198AQ9UFP1 575 aa18.21■□□□□ 0.51
CDK4-201ENST00000257904 P4HA2O15460 535 aa18.21■□□□□ 0.51
CDK4-201ENST00000257904 ATMINO43313 823 aaPredicted RBP18.21■□□□□ 0.51
CDK4-201ENST00000257904 PPP3CAQ08209 521 aa18.21■□□□□ 0.51
CDK4-201ENST00000257904 ABCB5Q2M3G0 1257 aa18.21■□□□□ 0.51
CDK4-201ENST00000257904 DACT2Q5SW24 774 aa18.21■□□□□ 0.51
CDK4-201ENST00000257904 VEZTQ9HBM0 779 aa18.21■□□□□ 0.51
CDK4-201ENST00000257904 BAIAP2L1Q9UHR4 511 aa18.21■□□□□ 0.51
CDK4-201ENST00000257904 PRR12Q9ULL5 1215 aa18.21■□□□□ 0.51
CDK4-201ENST00000257904 SCN9AQ15858 1988 aa18.2■□□□□ 0.5
CDK4-201ENST00000257904 HIP1RO75146 1068 aa18.2■□□□□ 0.5
CDK4-201ENST00000257904 ECEL1O95672 775 aa18.2■□□□□ 0.5
CDK4-201ENST00000257904 CHRNB2P17787 502 aa18.2■□□□□ 0.5
CDK4-201ENST00000257904 KCNJ1P48048 391 aa18.2■□□□□ 0.5
CDK4-201ENST00000257904 VAMP7P51809 220 aa18.2■□□□□ 0.5
CDK4-201ENST00000257904 RIPK1Q13546 671 aa18.2■□□□□ 0.5
CDK4-201ENST00000257904 CCDC25Q86WR0 208 aa18.2■□□□□ 0.5
CDK4-201ENST00000257904 DAW1Q8N136 415 aa18.2■□□□□ 0.5
CDK4-201ENST00000257904 EPS8L1Q8TE68 723 aa18.2■□□□□ 0.5
CDK4-201ENST00000257904 TCP11Q8WWU5 503 aa18.2■□□□□ 0.5
CDK4-201ENST00000257904 NOCTQ9UK39 431 aaKnown RBP18.2■□□□□ 0.5
CDK4-201ENST00000257904 SPOPO43791 374 aa18.19■□□□□ 0.5
CDK4-201ENST00000257904 SGPL1O95470 568 aa18.19■□□□□ 0.5
CDK4-201ENST00000257904 GZMAP12544 262 aa18.19■□□□□ 0.5
CDK4-201ENST00000257904 GCLMP48507 274 aa18.19■□□□□ 0.5
CDK4-201ENST00000257904 CALCOCO2Q13137 446 aa18.19■□□□□ 0.5
CDK4-201ENST00000257904 CC2D2BQ6DHV5 1058 aa18.19■□□□□ 0.5
CDK4-201ENST00000257904 CRELD2Q6UXH1 353 aaPredicted RBP18.19■□□□□ 0.5
CDK4-201ENST00000257904 MIGA2Q7L4E1 593 aa18.19■□□□□ 0.5
CDK4-201ENST00000257904 TBC1D1Q86TI0 1168 aaPredicted RBP18.19■□□□□ 0.5
CDK4-201ENST00000257904 NOP9Q86U38 636 aaKnown RBP18.19■□□□□ 0.5
CDK4-201ENST00000257904 CPNE8Q86YQ8 564 aa18.19■□□□□ 0.5
CDK4-201ENST00000257904 ZNF564Q8TBZ8 553 aaPredicted RBP18.19■□□□□ 0.5
CDK4-201ENST00000257904 CDC42EP4Q9H3Q1 356 aaKnown RBP18.19■□□□□ 0.5
CDK4-201ENST00000257904 UNC45AQ9H3U1 944 aa18.19■□□□□ 0.5
CDK4-201ENST00000257904 PCIF1Q9H4Z3 704 aa18.19■□□□□ 0.5
CDK4-201ENST00000257904 LRRC19Q9H756 370 aa18.19■□□□□ 0.5
CDK4-201ENST00000257904 AGAP1Q9UPQ3 857 aa18.19■□□□□ 0.5
CDK4-201ENST00000257904 CD2APQ9Y5K6 639 aa18.19■□□□□ 0.5
CDK4-201ENST00000257904 ARHGEF35A5YM69 484 aa18.19■□□□□ 0.5
CDK4-201ENST00000257904 K7ENM7 598 aa18.19■□□□□ 0.5
CDK4-201ENST00000257904 CFBP00751 764 aa18.19■□□□□ 0.5
CDK4-201ENST00000257904 FKBP1AP62942 108 aaKnown RBP18.19■□□□□ 0.5
CDK4-201ENST00000257904 LONRF1Q17RB8 773 aa18.19■□□□□ 0.5
CDK4-201ENST00000257904 TLDC1Q6P9B6 456 aa18.19■□□□□ 0.5
CDK4-201ENST00000257904 KAT5Q92993 513 aa18.19■□□□□ 0.5
CDK4-201ENST00000257904 BTBD6Q96KE9 485 aa18.19■□□□□ 0.5
CDK4-201ENST00000257904 LXNQ9BS40 222 aa18.19■□□□□ 0.5
CDK4-201ENST00000257904 DDX23Q9BUQ8 820 aaKnown RBP18.19■□□□□ 0.5
CDK4-201ENST00000257904 NUP85Q9BW27 656 aa18.19■□□□□ 0.5
CDK4-201ENST00000257904 IDI2Q9BXS1 227 aa18.19■□□□□ 0.5
CDK4-201ENST00000257904 WDR11Q9BZH6 1224 aa18.19■□□□□ 0.5
CDK4-201ENST00000257904 DONSONQ9NYP3 566 aa18.19■□□□□ 0.5
CDK4-201ENST00000257904 USP15Q9Y4E8 981 aaPredicted RBP18.19■□□□□ 0.5
CDK4-201ENST00000257904 TISP43B9A030 160 aa18.18■□□□□ 0.5
CDK4-201ENST00000257904 TP73O15350 636 aa18.18■□□□□ 0.5
CDK4-201ENST00000257904 UBOX5O94941 541 aa18.18■□□□□ 0.5
CDK4-201ENST00000257904 CLTAP09496 248 aa18.18■□□□□ 0.5
CDK4-201ENST00000257904 RWDD2BP57060 319 aa18.18■□□□□ 0.5
CDK4-201ENST00000257904 C1orf220Q5T0J3 134 aa18.18■□□□□ 0.5
CDK4-201ENST00000257904 RNF207Q6ZRF8 634 aa18.18■□□□□ 0.5
CDK4-201ENST00000257904 PNMA8AQ86V59 439 aaPredicted RBP18.18■□□□□ 0.5
CDK4-201ENST00000257904 CCDC125Q86Z20 511 aa18.18■□□□□ 0.5
CDK4-201ENST00000257904 FAM71AQ8IYT1 594 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms