RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 SPDYE5A6NIY4 337 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 BAG3O95817 575 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 ANXA1P04083 346 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 ATP6V1B1P15313 513 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 NFIL3Q16649 462 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 RBM20Q5T481 1227 aaKnown RBP7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 CLEC4GQ6UXB4 293 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 RGS9BPQ6ZS82 235 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 ADCK1Q86TW2 530 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 PHKBQ93100 1093 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 TNIP3Q96KP6 325 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 SMYD3Q9H7B4 428 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 LRP2BPQ9P2M1 347 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 EDARQ9UNE0 448 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 GSNP06396 782 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 UQCRFS1P1P0C7P4 283 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 GSTT2P0CG29 244 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 GSTT2BP0CG30 244 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 BYSLQ13895 437 aaKnown RBP7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 VEPH1Q14D04 833 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 HAUS3Q68CZ6 603 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 TTLL7Q6ZT98 887 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 PGBD1Q96JS3 809 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 RILPQ96NA2 401 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 MNTQ99583 582 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 ERVV-2B6SEH9 535 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 RASSF9O75901 435 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 SLC12A2P55011 1212 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 EFTUD2Q15029 972 aaKnown RBP eCLIP7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 LIN52Q52LA3 116 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 ERICH5Q6P6B1 374 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 LPCAT2Q7L5N7 544 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 TBC1D19Q8N5T2 526 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 PBXIP1Q96AQ6 731 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 AP1M1Q9BXS5 423 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 PITPNM3Q9BZ71 974 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 FOXP3Q9BZS1 431 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 DOLKQ9UPQ8 538 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 REREQ9P2R6 1566 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 KRT36O76013 467 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 ZNF806P0C7X5 589 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 PDE1AP54750 535 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 VCPP55072 806 aaKnown RBP7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 CCZ1BP86790 482 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 CCZ1P86791 482 aaPredicted RBP7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 XRCC4Q13426 336 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 ADSSL1Q8N142 457 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 PLBD2Q8NHP8 589 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 NELFBQ8WX92 580 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 EMILIN2Q9BXX0 1053 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 RNPEPL1Q9HAU8 725 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 SLC35C2Q9NQQ7 365 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 DCAF16Q9NXF7 216 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 KLF15Q9UIH9 416 aa7.14□□□□□ -1.27
PDGFRA-201ENST00000257290 PHF20L1A8MW92 1017 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 TMEM114B3SHH9 223 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 IL15P40933 162 aaPredicted RBP7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 EIF4A1P60842 406 aaKnown RBP7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 MAGOHP61326 146 aaKnown RBP7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 HPCAP84074 193 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 SNX17Q15036 470 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 TTC23LQ6PF05 361 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 ZNF354CQ86Y25 554 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 JDP2Q8WYK2 163 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 MAGOHBQ96A72 148 aaKnown RBP7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 FAM161BQ96MY7 647 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 OXCT2Q9BYC2 517 aaPredicted RBP7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 TRIM8Q9BZR9 551 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 TRIM15Q9C019 465 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 SLC12A7Q9Y666 1083 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 A0A0G2JPF8 293 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 CCDC194A0A1B0GVG4 234 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 GRXCR2A6NFK2 248 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 CENPBD1B2RD01 187 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 HNRNPCL3B7ZW38 293 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 IDH1O75874 414 aaKnown RBP7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 TOMM70O94826 608 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 HNRNPCL4P0DMR1 293 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 SNX30Q5VWJ9 437 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 E4F1Q66K89 784 aaPredicted RBP7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 WDR93Q6P2C0 686 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 SH2D3CQ8N5H7 860 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 SSH3Q8TE77 659 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 AIFM3Q96NN9 605 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 XPO6Q96QU8 1125 aaKnown RBP7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 CGREF1Q99674 301 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 GAL3ST1Q99999 423 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 MRPS26Q9BYN8 205 aaKnown RBP7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 BRD9Q9H8M2 597 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 FAM8A1Q9UBU6 413 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 TRMT6Q9UJA5 497 aaKnown RBP7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 SNX6Q9UNH7 406 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 ABCC4O15439 1325 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 CENPXA8MT69 81 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 NOP56O00567 594 aaKnown RBP7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 CRTAPO75718 401 aaPredicted RBP7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 GAP43P17677 238 aa7.13□□□□□ -1.27
PDGFRA-201ENST00000257290 CTNNA2P26232 953 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms