RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 POLR2MP0CAP2 368 aa12.15□□□□□ -0.46
PDE6B-201ENST00000255622 HPDP32754 393 aaPredicted RBP12.15□□□□□ -0.46
PDE6B-201ENST00000255622 HSPA1LP34931 641 aa12.15□□□□□ -0.46
PDE6B-201ENST00000255622 HSD17B3P37058 310 aa12.15□□□□□ -0.46
PDE6B-201ENST00000255622 PRELPP51888 382 aa12.15□□□□□ -0.46
PDE6B-201ENST00000255622 PPP2R5CQ13362 524 aa12.15□□□□□ -0.46
PDE6B-201ENST00000255622 DCAF12L1Q5VU92 463 aa12.15□□□□□ -0.46
PDE6B-201ENST00000255622 MREGQ8N565 214 aa12.15□□□□□ -0.46
PDE6B-201ENST00000255622 ZSWIM2Q8NEG5 633 aa12.15□□□□□ -0.46
PDE6B-201ENST00000255622 SLC30A5Q8TAD4 765 aa12.15□□□□□ -0.46
PDE6B-201ENST00000255622 SLC5A5Q92911 643 aa12.15□□□□□ -0.46
PDE6B-201ENST00000255622 AKT1S1Q96B36 256 aa12.15□□□□□ -0.46
PDE6B-201ENST00000255622 LXNQ9BS40 222 aa12.15□□□□□ -0.46
PDE6B-201ENST00000255622 MRIQ9BWK5 157 aa12.15□□□□□ -0.46
PDE6B-201ENST00000255622 ISCUQ9H1K1 167 aa12.15□□□□□ -0.46
PDE6B-201ENST00000255622 PCIF1Q9H4Z3 704 aa12.15□□□□□ -0.46
PDE6B-201ENST00000255622 LRRC4CQ9HCJ2 640 aa12.15□□□□□ -0.46
PDE6B-201ENST00000255622 TUFT1Q9NNX1 390 aa12.15□□□□□ -0.46
PDE6B-201ENST00000255622 FBXL5Q9UKA1 691 aa12.15□□□□□ -0.46
PDE6B-201ENST00000255622 UNCXA6NJT0 531 aa12.14□□□□□ -0.47
PDE6B-201ENST00000255622 EIF3DO15371 548 aaKnown RBP eCLIP12.14□□□□□ -0.47
PDE6B-201ENST00000255622 FERP16591 822 aa12.14□□□□□ -0.47
PDE6B-201ENST00000255622 HDLBPQ00341 1268 aaKnown RBP12.14□□□□□ -0.47
PDE6B-201ENST00000255622 IFI16Q16666 785 aaKnown RBP12.14□□□□□ -0.47
PDE6B-201ENST00000255622 MIGA2Q7L4E1 593 aa12.14□□□□□ -0.47
PDE6B-201ENST00000255622 SLFN11Q7Z7L1 901 aa12.14□□□□□ -0.47
PDE6B-201ENST00000255622 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.14□□□□□ -0.47
PDE6B-201ENST00000255622 MAB21L3Q8N8X9 362 aa12.14□□□□□ -0.47
PDE6B-201ENST00000255622 TRIM31Q9BZY9 425 aa12.14□□□□□ -0.47
PDE6B-201ENST00000255622 INTS2Q9H0H0 1204 aaKnown RBP12.14□□□□□ -0.47
PDE6B-201ENST00000255622 GALNT8Q9NY28 637 aa12.14□□□□□ -0.47
PDE6B-201ENST00000255622 BAIAP2L1Q9UHR4 511 aa12.14□□□□□ -0.47
PDE6B-201ENST00000255622 FRMPD4Q14CM0 1322 aa12.14□□□□□ -0.47
PDE6B-201ENST00000255622 SKOR1P84550 965 aa12.14□□□□□ -0.47
PDE6B-201ENST00000255622 ZNF211Q13398 564 aaPredicted RBP12.14□□□□□ -0.47
PDE6B-201ENST00000255622 SF3B2Q13435 895 aaKnown RBP12.14□□□□□ -0.47
PDE6B-201ENST00000255622 CEP55Q53EZ4 464 aa12.14□□□□□ -0.47
PDE6B-201ENST00000255622 PHLDB3Q6NSJ2 640 aa12.14□□□□□ -0.47
PDE6B-201ENST00000255622 SLC20A1Q8WUM9 679 aa12.14□□□□□ -0.47
PDE6B-201ENST00000255622 UBE2OQ9C0C9 1292 aaKnown RBP12.14□□□□□ -0.47
PDE6B-201ENST00000255622 THAP2Q9H0W7 228 aa12.14□□□□□ -0.47
PDE6B-201ENST00000255622 DPH5Q9H2P9 285 aa12.14□□□□□ -0.47
PDE6B-201ENST00000255622 GTPBP10A4D1E9 387 aaKnown RBP12.13□□□□□ -0.47
PDE6B-201ENST00000255622 CES2O00748 559 aa12.13□□□□□ -0.47
PDE6B-201ENST00000255622 PFDN1O60925 122 aa12.13□□□□□ -0.47
PDE6B-201ENST00000255622 HIP1RO75146 1068 aa12.13□□□□□ -0.47
PDE6B-201ENST00000255622 FGGP02679 453 aa12.13□□□□□ -0.47
PDE6B-201ENST00000255622 NR1D1P20393 614 aa12.13□□□□□ -0.47
PDE6B-201ENST00000255622 HSPA9P38646 679 aaKnown RBP12.13□□□□□ -0.47
PDE6B-201ENST00000255622 GCLCP48506 637 aaPredicted RBP12.13□□□□□ -0.47
PDE6B-201ENST00000255622 SMUG1Q53HV7 270 aa12.13□□□□□ -0.47
PDE6B-201ENST00000255622 AADACL2Q6P093 401 aa12.13□□□□□ -0.47
PDE6B-201ENST00000255622 SEPT14Q6ZU15 432 aa12.13□□□□□ -0.47
PDE6B-201ENST00000255622 DAW1Q8N136 415 aa12.13□□□□□ -0.47
PDE6B-201ENST00000255622 HES6Q96HZ4 224 aa12.13□□□□□ -0.47
PDE6B-201ENST00000255622 TRIM51Q9BSJ1 452 aa12.13□□□□□ -0.47
PDE6B-201ENST00000255622 MKS1Q9NXB0 559 aa12.13□□□□□ -0.47
PDE6B-201ENST00000255622 COG5Q9UP83 839 aa12.13□□□□□ -0.47
PDE6B-201ENST00000255622 TMEM150BA6NC51 233 aa12.13□□□□□ -0.47
PDE6B-201ENST00000255622 LDHAP00338 332 aaKnown RBP12.13□□□□□ -0.47
PDE6B-201ENST00000255622 IGBP1P78318 339 aa12.13□□□□□ -0.47
PDE6B-201ENST00000255622 MYL7Q01449 175 aa12.13□□□□□ -0.47
PDE6B-201ENST00000255622 PPP1R15BQ5SWA1 713 aa12.13□□□□□ -0.47
PDE6B-201ENST00000255622 FAAH2Q6GMR7 532 aa12.13□□□□□ -0.47
PDE6B-201ENST00000255622 CORO1BQ9BR76 489 aa12.13□□□□□ -0.47
PDE6B-201ENST00000255622 STK33Q9BYT3 514 aa12.13□□□□□ -0.47
PDE6B-201ENST00000255622 SUCLA2Q9P2R7 463 aaPredicted RBP12.13□□□□□ -0.47
PDE6B-201ENST00000255622 ZBTB21Q9ULJ3 1066 aa12.13□□□□□ -0.47
PDE6B-201ENST00000255622 H0YIN7 160 aa12.13□□□□□ -0.47
PDE6B-201ENST00000255622 FOXN3O00409 490 aaPredicted RBP12.13□□□□□ -0.47
PDE6B-201ENST00000255622 EXOC3O60645 756 aa12.13□□□□□ -0.47
PDE6B-201ENST00000255622 ENTPD3O75355 529 aa12.13□□□□□ -0.47
PDE6B-201ENST00000255622 SLC8A1P32418 973 aa12.13□□□□□ -0.47
PDE6B-201ENST00000255622 SEC24CP53992 1094 aa12.13□□□□□ -0.47
PDE6B-201ENST00000255622 SLC15A2Q16348 729 aa12.13□□□□□ -0.47
PDE6B-201ENST00000255622 HS2ST1Q7LGA3 356 aa12.13□□□□□ -0.47
PDE6B-201ENST00000255622 WDR75Q8IWA0 830 aaKnown RBP12.13□□□□□ -0.47
PDE6B-201ENST00000255622 SPIRE2Q8WWL2 714 aa12.13□□□□□ -0.47
PDE6B-201ENST00000255622 SPATA17Q96L03 361 aa12.13□□□□□ -0.47
PDE6B-201ENST00000255622 ATP6V1G3Q96LB4 118 aa12.13□□□□□ -0.47
PDE6B-201ENST00000255622 SLC7A5P2Q9GIP4 190 aa12.13□□□□□ -0.47
PDE6B-201ENST00000255622 ARHGEF10LQ9HCE6 1279 aa12.13□□□□□ -0.47
PDE6B-201ENST00000255622 PREBQ9HCU5 417 aa12.13□□□□□ -0.47
PDE6B-201ENST00000255622 MYH11P35749 1972 aa12.13□□□□□ -0.47
PDE6B-201ENST00000255622 NPM3O75607 178 aaKnown RBP12.12□□□□□ -0.47
PDE6B-201ENST00000255622 LSP1P33241 339 aa12.12□□□□□ -0.47
PDE6B-201ENST00000255622 CTCFP49711 727 aaPredicted RBP12.12□□□□□ -0.47
PDE6B-201ENST00000255622 ZNF131P52739 623 aa12.12□□□□□ -0.47
PDE6B-201ENST00000255622 MAPK7Q13164 816 aa12.12□□□□□ -0.47
PDE6B-201ENST00000255622 KDM7AQ6ZMT4 941 aa12.12□□□□□ -0.47
PDE6B-201ENST00000255622 UBLCP1Q8WVY7 318 aaPredicted RBP12.12□□□□□ -0.47
PDE6B-201ENST00000255622 SYT11Q9BT88 431 aa12.12□□□□□ -0.47
PDE6B-201ENST00000255622 APEX2Q9UBZ4 518 aa12.12□□□□□ -0.47
PDE6B-201ENST00000255622 TMX2Q9Y320 296 aa12.12□□□□□ -0.47
PDE6B-201ENST00000255622 K7ENM7 598 aa12.12□□□□□ -0.47
PDE6B-201ENST00000255622 MMEP08473 750 aa12.12□□□□□ -0.47
PDE6B-201ENST00000255622 ITGB5P18084 799 aa12.12□□□□□ -0.47
PDE6B-201ENST00000255622 CTNNA1P35221 906 aaKnown RBP12.12□□□□□ -0.47
PDE6B-201ENST00000255622 SMTNP53814 917 aa12.12□□□□□ -0.47
PDE6B-201ENST00000255622 FKBP1AP62942 108 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms