RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.67□□□□□ -0.38
CCNA1-201ENST00000255465 SSX2IPQ9Y2D8 614 aa12.67□□□□□ -0.38
CCNA1-201ENST00000255465 PTPDC1A2A3K4 754 aa12.66□□□□□ -0.38
CCNA1-201ENST00000255465 SPECC1L-ADORA2AF8WAN1 911 aa12.66□□□□□ -0.38
CCNA1-201ENST00000255465 HNRNPCL1O60812 293 aaKnown RBP12.66□□□□□ -0.38
CCNA1-201ENST00000255465 UPP2O95045 317 aa12.66□□□□□ -0.38
CCNA1-201ENST00000255465 HSPA1AP0DMV8 641 aaKnown RBP12.66□□□□□ -0.38
CCNA1-201ENST00000255465 HSPA1BP0DMV9 641 aaKnown RBP12.66□□□□□ -0.38
CCNA1-201ENST00000255465 SHMT1P34896 483 aa12.66□□□□□ -0.38
CCNA1-201ENST00000255465 TM4SF4P48230 202 aa12.66□□□□□ -0.38
CCNA1-201ENST00000255465 FXR1P51114 621 aaKnown RBP eCLIP12.66□□□□□ -0.38
CCNA1-201ENST00000255465 CSE1LP55060 971 aaKnown RBP12.66□□□□□ -0.38
CCNA1-201ENST00000255465 JAG1P78504 1218 aa12.66□□□□□ -0.38
CCNA1-201ENST00000255465 ZNF844Q08AG5 666 aa12.66□□□□□ -0.38
CCNA1-201ENST00000255465 PIP4K2CQ8TBX8 421 aa12.66□□□□□ -0.38
CCNA1-201ENST00000255465 ATXN2LQ8WWM7 1075 aaKnown RBP12.66□□□□□ -0.38
CCNA1-201ENST00000255465 TAF4BQ92750 862 aa12.66□□□□□ -0.38
CCNA1-201ENST00000255465 DYNLL2Q96FJ2 89 aa12.66□□□□□ -0.38
CCNA1-201ENST00000255465 MS4A4AQ96JQ5 239 aa12.66□□□□□ -0.38
CCNA1-201ENST00000255465 UIMC1Q96RL1 719 aa12.66□□□□□ -0.38
CCNA1-201ENST00000255465 ZNF180Q9UJW8 692 aa12.66□□□□□ -0.38
CCNA1-201ENST00000255465 USP20Q9Y2K6 914 aa12.66□□□□□ -0.38
CCNA1-201ENST00000255465 ARL2BPQ9Y2Y0 163 aa12.66□□□□□ -0.38
CCNA1-201ENST00000255465 PCDHB2Q9Y5E7 798 aa12.66□□□□□ -0.38
CCNA1-201ENST00000255465 PCDHA5Q9Y5H7 936 aa12.66□□□□□ -0.38
CCNA1-201ENST00000255465 ZHX2Q9Y6X8 837 aa12.66□□□□□ -0.38
CCNA1-201ENST00000255465 MINDY4BA8MYZ0 360 aa12.65□□□□□ -0.38
CCNA1-201ENST00000255465 ATP9AO75110 1047 aa12.65□□□□□ -0.38
CCNA1-201ENST00000255465 SERPINB7O75635 380 aa12.65□□□□□ -0.38
CCNA1-201ENST00000255465 GDF11O95390 407 aa12.65□□□□□ -0.38
CCNA1-201ENST00000255465 SREBF2Q12772 1141 aa12.65□□□□□ -0.38
CCNA1-201ENST00000255465 SHROOM1Q2M3G4 852 aaPredicted RBP12.65□□□□□ -0.38
CCNA1-201ENST00000255465 CERKLQ49MI3 558 aaPredicted RBP12.65□□□□□ -0.38
CCNA1-201ENST00000255465 DEPDC1Q5TB30 811 aa12.65□□□□□ -0.38
CCNA1-201ENST00000255465 CCDC84Q86UT8 332 aaPredicted RBP12.65□□□□□ -0.38
CCNA1-201ENST00000255465 C11orf74Q86VG3 221 aa12.65□□□□□ -0.38
CCNA1-201ENST00000255465 SPATA24Q86W54 205 aa12.65□□□□□ -0.38
CCNA1-201ENST00000255465 NUP93Q8N1F7 819 aa12.65□□□□□ -0.38
CCNA1-201ENST00000255465 SLC44A5Q8NCS7 719 aa12.65□□□□□ -0.38
CCNA1-201ENST00000255465 FNDC8Q8TC99 324 aa12.65□□□□□ -0.38
CCNA1-201ENST00000255465 NUDCD1Q96RS6 583 aa12.65□□□□□ -0.38
CCNA1-201ENST00000255465 DNAJC7Q99615 494 aa12.65□□□□□ -0.38
CCNA1-201ENST00000255465 DRC3Q9H069 523 aa12.65□□□□□ -0.38
CCNA1-201ENST00000255465 NAPBQ9H115 298 aa12.65□□□□□ -0.38
CCNA1-201ENST00000255465 LIMA1Q9UHB6 759 aaKnown RBP12.65□□□□□ -0.38
CCNA1-201ENST00000255465 MAN1B1Q9UKM7 699 aa12.65□□□□□ -0.38
CCNA1-201ENST00000255465 NFU1Q9UMS0 254 aa12.65□□□□□ -0.38
CCNA1-201ENST00000255465 UNC5CO95185 931 aa12.65□□□□□ -0.38
CCNA1-201ENST00000255465 ASNSP08243 561 aa12.65□□□□□ -0.38
CCNA1-201ENST00000255465 PTPN2P17706 415 aa12.65□□□□□ -0.38
CCNA1-201ENST00000255465 RASSF2P50749 326 aa12.65□□□□□ -0.38
CCNA1-201ENST00000255465 GTF2A2P52657 109 aa12.65□□□□□ -0.38
CCNA1-201ENST00000255465 HERVK_113P62684 666 aa12.65□□□□□ -0.38
CCNA1-201ENST00000255465 MDM2Q00987 491 aaPredicted RBP12.65□□□□□ -0.38
CCNA1-201ENST00000255465 PLCB3Q01970 1234 aa12.65□□□□□ -0.38
CCNA1-201ENST00000255465 STK3Q13188 491 aa12.65□□□□□ -0.38
CCNA1-201ENST00000255465 PNOCQ13519 176 aa12.65□□□□□ -0.38
CCNA1-201ENST00000255465 SUZ12Q15022 739 aaKnown RBP12.65□□□□□ -0.38
CCNA1-201ENST00000255465 CFAP221Q4G0U5 840 aa12.65□□□□□ -0.38
CCNA1-201ENST00000255465 RNF43Q68DV7 783 aa12.65□□□□□ -0.38
CCNA1-201ENST00000255465 C16orf86Q6ZW13 317 aa12.65□□□□□ -0.38
CCNA1-201ENST00000255465 BEGAINQ9BUH8 593 aa12.65□□□□□ -0.38
CCNA1-201ENST00000255465 ISCUQ9H1K1 167 aa12.65□□□□□ -0.38
CCNA1-201ENST00000255465 DPH5Q9H2P9 285 aa12.65□□□□□ -0.38
CCNA1-201ENST00000255465 NMRK1Q9NWW6 199 aa12.65□□□□□ -0.38
CCNA1-201ENST00000255465 NKX1-2Q9UD57 310 aaPredicted RBP12.65□□□□□ -0.38
CCNA1-201ENST00000255465 CNOT8Q9UFF9 292 aaKnown RBP12.65□□□□□ -0.38
CCNA1-201ENST00000255465 STK38LQ9Y2H1 464 aa12.65□□□□□ -0.38
CCNA1-201ENST00000255465 AFG3L2Q9Y4W6 797 aa12.65□□□□□ -0.38
CCNA1-201ENST00000255465 CAPN6Q9Y6Q1 641 aa12.65□□□□□ -0.38
CCNA1-201ENST00000255465 LAMA4Q16363 1823 aa12.64□□□□□ -0.39
CCNA1-201ENST00000255465 POTEFA5A3E0 1075 aa12.64□□□□□ -0.39
CCNA1-201ENST00000255465 GOLGA8TH3BQL2 631 aa12.64□□□□□ -0.39
CCNA1-201ENST00000255465 TEX33O43247 280 aa12.64□□□□□ -0.39
CCNA1-201ENST00000255465 LDHAP00338 332 aaKnown RBP12.64□□□□□ -0.39
CCNA1-201ENST00000255465 GOLGA8HP0CJ92 632 aa12.64□□□□□ -0.39
CCNA1-201ENST00000255465 MYBP10242 640 aa12.64□□□□□ -0.39
CCNA1-201ENST00000255465 HSPD1P10809 573 aaKnown RBP12.64□□□□□ -0.39
CCNA1-201ENST00000255465 HSPA8P11142 646 aaKnown RBP12.64□□□□□ -0.39
CCNA1-201ENST00000255465 FUT4P22083 530 aa12.64□□□□□ -0.39
CCNA1-201ENST00000255465 HOXD11P31277 338 aaPredicted RBP12.64□□□□□ -0.39
CCNA1-201ENST00000255465 HSD17B3P37058 310 aa12.64□□□□□ -0.39
CCNA1-201ENST00000255465 CDK8P49336 464 aa12.64□□□□□ -0.39
CCNA1-201ENST00000255465 RPL26P61254 145 aaKnown RBP12.64□□□□□ -0.39
CCNA1-201ENST00000255465 SNAPC2Q13487 334 aa12.64□□□□□ -0.39
CCNA1-201ENST00000255465 ACVR2BQ13705 512 aa12.64□□□□□ -0.39
CCNA1-201ENST00000255465 MEA1Q16626 185 aa12.64□□□□□ -0.39
CCNA1-201ENST00000255465 TRIM71Q2Q1W2 868 aaKnown RBP12.64□□□□□ -0.39
CCNA1-201ENST00000255465 CCDC14Q49A88 953 aa12.64□□□□□ -0.39
CCNA1-201ENST00000255465 TCERG1LQ5VWI1 586 aa12.64□□□□□ -0.39
CCNA1-201ENST00000255465 UCMAQ8WVF2 138 aa12.64□□□□□ -0.39
CCNA1-201ENST00000255465 GIMAP1Q8WWP7 306 aa12.64□□□□□ -0.39
CCNA1-201ENST00000255465 FERMT2Q96AC1 680 aa12.64□□□□□ -0.39
CCNA1-201ENST00000255465 AGXT2Q9BYV1 514 aa12.64□□□□□ -0.39
CCNA1-201ENST00000255465 STMN4Q9H169 189 aaPredicted RBP12.64□□□□□ -0.39
CCNA1-201ENST00000255465 GINM1Q9NU53 330 aa12.64□□□□□ -0.39
CCNA1-201ENST00000255465 ABCF3Q9NUQ8 709 aa12.64□□□□□ -0.39
CCNA1-201ENST00000255465 ETNK2Q9NVF9 386 aa12.64□□□□□ -0.39
CCNA1-201ENST00000255465 ZBTB21Q9ULJ3 1066 aa12.64□□□□□ -0.39
CCNA1-201ENST00000255465 KCNH4Q9UQ05 1017 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms