RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 TIPINQ9BVW5 301 aa15.21■□□□□ 0.02
ZC3H4-201ENST00000253048 Q9H521 79 aa15.21■□□□□ 0.02
ZC3H4-201ENST00000253048 A0A1B0GUA9 196 aa15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 KIAA0391O15091 583 aaKnown RBP15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 KRT39Q6A163 491 aa15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 EPN1Q9Y6I3 576 aaPredicted RBP15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 NEDD4P46934 1319 aa15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 CNTNAP4Q9C0A0 1308 aa15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 MBD5Q9P267 1494 aa15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 POTECB2RU33 542 aa15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 KIF23Q02241 960 aaPredicted RBP15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 ATG16L1Q676U5 607 aa15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 CES5AQ6NT32 575 aa15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 CENPUQ71F23 418 aa15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 RASSF3Q86WH2 238 aa15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 CDKL3Q8IVW4 592 aaPredicted RBP15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 RNF10Q8N5U6 811 aaKnown RBP15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 PPP1R13BQ96KQ4 1090 aa15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 DESI2Q9BSY9 194 aa15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 C6orf203Q9P0P8 240 aaPredicted RBP15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 CNOT8Q9UFF9 292 aaKnown RBP15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.2■□□□□ 0.022e-8■■■□□ 15.1
ZC3H4-201ENST00000253048 CKBP12277 381 aa15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 ZFXP17010 805 aaPredicted RBP15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 USP11P51784 963 aa15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 CEP55Q53EZ4 464 aa15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 UNC13DQ70J99 1090 aa15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 OTUB1Q96FW1 271 aaPredicted RBP15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 MED15Q96RN5 788 aa15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 ABI2Q9NYB9 513 aaPredicted RBP15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 PCSK1NQ9UHG2 260 aa15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 C1orf167Q5SNV9 1468 aa15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 IQANK1A0A1B0GTG1 560 aa15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 DGAT1O75907 488 aa15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 BTG3Q14201 252 aaPredicted RBP15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 PKN3Q6P5Z2 889 aa15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 PYROXD1Q8WU10 500 aa15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 SOCS4Q8WXH5 440 aa15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 PPWD1Q96BP3 646 aaKnown RBP15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 KDM4CQ9H3R0 1056 aa15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 ZNF521Q96K83 1311 aa15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 DNAJB2P25686 324 aa15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 RCN2Q14257 317 aa15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 TMEM199Q8N511 208 aa15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 CFAP61Q8NHU2 1237 aa15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 ZC3H15Q8WU90 426 aaKnown RBP15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 ANAPC7Q9UJX3 599 aa15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 FLT1P17948 1338 aa15.2■□□□□ 0.02
ZC3H4-201ENST00000253048 AVPR1AP37288 418 aa15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 EMC2Q15006 297 aa15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 STILQ15468 1287 aa15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 KHDRBS2Q5VWX1 349 aaKnown RBP15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 NEDD1Q8NHV4 660 aa15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 PCDHGB4Q9UN71 923 aa15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 PCDHB6Q9Y5E3 794 aa15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 PDGFRBP09619 1106 aa15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 MYL4P12829 197 aa15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 SMARCA1P28370 1054 aa15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 RABGGTAQ92696 567 aa15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 ISCA1Q9BUE6 129 aa15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 FAM129AQ9BZQ8 928 aa15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 TBKBP1A7MCY6 615 aa15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 CFAP99D6REC4 459 aa15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 EFCAB14O75071 495 aa15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 VCLP18206 1134 aa15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 ORC2Q13416 577 aaPredicted RBP15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 ANKRD20A4Q4UJ75 823 aa15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 ANKRD20A8PQ5CZ79 823 aa15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 ANKRD20A2Q5SQ80 823 aa15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 ANKRD20A1Q5TYW2 823 aa15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 ITIH5Q86UX2 942 aa15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 POTEDQ86YR6 584 aa15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 SLC7A14Q8TBB6 771 aa15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 RAPGEF5Q92565 580 aa15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 MAGEB10Q96LZ2 347 aaPredicted RBP15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 C11orf70Q9BRQ4 267 aa15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 LZTS3O60299 673 aaPredicted RBP15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 IL18RAPO95256 599 aa15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 ART3Q13508 389 aa15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 NSUN7Q8NE18 718 aaKnown RBP15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 SENP6Q9GZR1 1112 aaPredicted RBP15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 UNC45AQ9H3U1 944 aa15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 TUFT1Q9NNX1 390 aa15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 STAP2Q9UGK3 403 aa15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 MYPNQ86TC9 1320 aa15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 POTEFA5A3E0 1075 aa15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 POTEIP0CG38 1075 aa15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 PLS3P13797 630 aa15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 POTEGQ6S5H5 508 aa15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 POTEEQ6S8J3 1075 aa15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 RHOT2Q8IXI1 618 aa15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 ATG4CQ96DT6 458 aa15.19■□□□□ 0.02
ZC3H4-201ENST00000253048 HSPA4LO95757 839 aa15.18■□□□□ 0.02
ZC3H4-201ENST00000253048 PHLDB3Q6NSJ2 640 aa15.18■□□□□ 0.02
ZC3H4-201ENST00000253048 PPHLN1Q8NEY8 458 aaKnown RBP15.18■□□□□ 0.02
ZC3H4-201ENST00000253048 PLEKHF1Q96S99 279 aa15.18■□□□□ 0.02
ZC3H4-201ENST00000253048 FHDC1Q9C0D6 1143 aaPredicted RBP15.18■□□□□ 0.02
ZC3H4-201ENST00000253048 IP6K2Q9UHH9 426 aa15.18■□□□□ 0.02
ZC3H4-201ENST00000253048 ABCC3O15438 1527 aa15.18■□□□□ 0.02
ZC3H4-201ENST00000253048 A0A1W2PQ27 194 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms