RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 NOC2LQ9Y3T9 749 aaKnown RBP27.18■■□□□ 1.94
TMEM55B-201ENST00000250489 CYP2C19P33261 490 aa27.18■■□□□ 1.94
TMEM55B-201ENST00000250489 HADHBP55084 474 aaKnown RBP27.18■■□□□ 1.94
TMEM55B-201ENST00000250489 SV2AQ7L0J3 742 aa27.18■■□□□ 1.94
TMEM55B-201ENST00000250489 KCNN1Q92952 543 aa27.18■■□□□ 1.94
TMEM55B-201ENST00000250489 TMEM143Q96AN5 459 aa27.18■■□□□ 1.94
TMEM55B-201ENST00000250489 NT5C1BQ96P26 610 aa27.18■■□□□ 1.94
TMEM55B-201ENST00000250489 FAM213AQ9BRX8 229 aa27.18■■□□□ 1.94
TMEM55B-201ENST00000250489 PORCNQ9H237 461 aa27.18■■□□□ 1.94
TMEM55B-201ENST00000250489 ADAM21Q9UKJ8 722 aa27.18■■□□□ 1.94
TMEM55B-201ENST00000250489 FAM170AA1A519 330 aa27.17■■□□□ 1.94
TMEM55B-201ENST00000250489 SYF2O95926 243 aaKnown RBP27.17■■□□□ 1.94
TMEM55B-201ENST00000250489 FTLP02792 175 aaPredicted RBP27.17■■□□□ 1.94
TMEM55B-201ENST00000250489 TCEAL1Q15170 157 aa27.17■■□□□ 1.94
TMEM55B-201ENST00000250489 NCAPG2Q86XI2 1143 aa27.17■■□□□ 1.94
TMEM55B-201ENST00000250489 RHOT2Q8IXI1 618 aa27.17■■□□□ 1.94
TMEM55B-201ENST00000250489 PROCA1Q8NCQ7 364 aaPredicted RBP27.17■■□□□ 1.94
TMEM55B-201ENST00000250489 ASAP3Q8TDY4 903 aa27.17■■□□□ 1.94
TMEM55B-201ENST00000250489 CAVIN3Q969G5 261 aa27.17■■□□□ 1.94
TMEM55B-201ENST00000250489 PCDHB18PQ96TA0 734 aa27.17■■□□□ 1.94
TMEM55B-201ENST00000250489 NIFKQ9BYG3 293 aaKnown RBP27.17■■□□□ 1.94
TMEM55B-201ENST00000250489 EPB41L5Q9HCM4 733 aa27.17■■□□□ 1.94
TMEM55B-201ENST00000250489 A0A0G2JLL6 359 aaPredicted RBP27.17■■□□□ 1.94
TMEM55B-201ENST00000250489 CYP26A1O43174 497 aa27.17■■□□□ 1.94
TMEM55B-201ENST00000250489 DLATP10515 647 aaKnown RBP27.17■■□□□ 1.94
TMEM55B-201ENST00000250489 GUCY2DQ02846 1103 aa27.17■■□□□ 1.94
TMEM55B-201ENST00000250489 PRPF4BQ13523 1007 aaKnown RBP27.17■■□□□ 1.94
TMEM55B-201ENST00000250489 PRRT2Q7Z6L0 340 aaPredicted RBP27.17■■□□□ 1.94
TMEM55B-201ENST00000250489 KLHL7Q8IXQ5 586 aa27.17■■□□□ 1.94
TMEM55B-201ENST00000250489 CEP89Q96ST8 783 aa27.17■■□□□ 1.94
TMEM55B-201ENST00000250489 ELP3Q9H9T3 547 aa27.17■■□□□ 1.94
TMEM55B-201ENST00000250489 GSTTP1A0A1W2PQM5 241 aa27.16■■□□□ 1.94
TMEM55B-201ENST00000250489 ZSCAN5CA6NGD5 496 aaPredicted RBP27.16■■□□□ 1.94
TMEM55B-201ENST00000250489 IRF6O14896 467 aa27.16■■□□□ 1.94
TMEM55B-201ENST00000250489 DDX3YO15523 660 aaKnown RBP27.16■■□□□ 1.94
TMEM55B-201ENST00000250489 RAD51CO43502 376 aa27.16■■□□□ 1.94
TMEM55B-201ENST00000250489 FARP2O94887 1054 aaPredicted RBP27.16■■□□□ 1.94
TMEM55B-201ENST00000250489 IREB2P48200 963 aaKnown RBP27.16■■□□□ 1.94
TMEM55B-201ENST00000250489 LIG4P49917 911 aa27.16■■□□□ 1.94
TMEM55B-201ENST00000250489 ZNF233A6NK53 670 aa27.15■■□□□ 1.94
TMEM55B-201ENST00000250489 EXTL3O43909 919 aa27.15■■□□□ 1.94
TMEM55B-201ENST00000250489 RTN2O75298 545 aa27.15■■□□□ 1.94
TMEM55B-201ENST00000250489 GLRA2P23416 452 aa27.15■■□□□ 1.94
TMEM55B-201ENST00000250489 ARL2P36404 184 aa27.15■■□□□ 1.94
TMEM55B-201ENST00000250489 TAF3Q5VWG9 929 aa27.15■■□□□ 1.94
TMEM55B-201ENST00000250489 SLC47A2Q86VL8 602 aa27.15■■□□□ 1.94
TMEM55B-201ENST00000250489 EXOC4Q96A65 974 aa27.15■■□□□ 1.94
TMEM55B-201ENST00000250489 OTUD5Q96G74 571 aa27.15■■□□□ 1.94
TMEM55B-201ENST00000250489 PCYT2Q99447 389 aa27.15■■□□□ 1.94
TMEM55B-201ENST00000250489 KIAA1586Q9HCI6 787 aa27.15■■□□□ 1.94
TMEM55B-201ENST00000250489 PRDM4Q9UKN5 801 aa27.15■■□□□ 1.94
TMEM55B-201ENST00000250489 STYXL1Q9Y6J8 313 aa27.15■■□□□ 1.94
TMEM55B-201ENST00000250489 SIP14410 1827 aa27.15■■□□□ 1.94
TMEM55B-201ENST00000250489 NAMPTP43490 491 aa27.15■■□□□ 1.94
TMEM55B-201ENST00000250489 CARSP49589 748 aaKnown RBP27.15■■□□□ 1.94
TMEM55B-201ENST00000250489 IRX3P78415 501 aaPredicted RBP27.15■■□□□ 1.94
TMEM55B-201ENST00000250489 STRN3Q13033 797 aa27.15■■□□□ 1.94
TMEM55B-201ENST00000250489 ACP6Q9NPH0 428 aa27.15■■□□□ 1.94
TMEM55B-201ENST00000250489 LRRC37A2A6NM11 1700 aa27.14■■□□□ 1.94
TMEM55B-201ENST00000250489 AGPSO00116 658 aa27.14■■□□□ 1.94
TMEM55B-201ENST00000250489 GZMAP12544 262 aa27.14■■□□□ 1.94
TMEM55B-201ENST00000250489 SCP2P22307 547 aa27.14■■□□□ 1.94
TMEM55B-201ENST00000250489 GPC5P78333 572 aa27.14■■□□□ 1.94
TMEM55B-201ENST00000250489 NNTQ13423 1086 aa27.14■■□□□ 1.94
TMEM55B-201ENST00000250489 C15orf39Q6ZRI6 1047 aa27.14■■□□□ 1.94
TMEM55B-201ENST00000250489 AP1M1Q9BXS5 423 aa27.14■■□□□ 1.94
TMEM55B-201ENST00000250489 PLEKHA4Q9H4M7 779 aa27.14■■□□□ 1.94
TMEM55B-201ENST00000250489 ESYT3A0FGR9 886 aa27.13■■□□□ 1.93
TMEM55B-201ENST00000250489 CCDC188H7C350 402 aa27.13■■□□□ 1.93
TMEM55B-201ENST00000250489 PHACTR2O75167 634 aa27.13■■□□□ 1.93
TMEM55B-201ENST00000250489 CNMDO75829 334 aa27.13■■□□□ 1.93
TMEM55B-201ENST00000250489 PIGRP01833 764 aa27.13■■□□□ 1.93
TMEM55B-201ENST00000250489 GGCXP38435 758 aa27.13■■□□□ 1.93
TMEM55B-201ENST00000250489 FMO1Q01740 532 aa27.13■■□□□ 1.93
TMEM55B-201ENST00000250489 PAK2Q13177 524 aa27.13■■□□□ 1.93
TMEM55B-201ENST00000250489 CASKIN2Q8WXE0 1202 aa27.13■■□□□ 1.93
TMEM55B-201ENST00000250489 PSPC1Q8WXF1 523 aaKnown RBP27.13■■□□□ 1.93
TMEM55B-201ENST00000250489 SLC7A3Q8WY07 619 aa27.13■■□□□ 1.93
TMEM55B-201ENST00000250489 PAGR1Q9BTK6 254 aa27.13■■□□□ 1.93
TMEM55B-201ENST00000250489 TTC7AQ9ULT0 858 aaPredicted RBP27.13■■□□□ 1.93
TMEM55B-201ENST00000250489 CYP11B1P15538 503 aa27.13■■□□□ 1.93
TMEM55B-201ENST00000250489 CLDN10P78369 228 aa27.13■■□□□ 1.93
TMEM55B-201ENST00000250489 NEDD9Q14511 834 aa27.13■■□□□ 1.93
TMEM55B-201ENST00000250489 PSMD6Q15008 389 aa27.13■■□□□ 1.93
TMEM55B-201ENST00000250489 DEPTORQ8TB45 409 aa27.13■■□□□ 1.93
TMEM55B-201ENST00000250489 ZNF516Q92618 1163 aa27.13■■□□□ 1.93
TMEM55B-201ENST00000250489 TATDN2Q93075 761 aa27.13■■□□□ 1.93
TMEM55B-201ENST00000250489 CLMNQ96JQ2 1002 aa27.13■■□□□ 1.93
TMEM55B-201ENST00000250489 ASCC2Q9H1I8 757 aaPredicted RBP27.13■■□□□ 1.93
TMEM55B-201ENST00000250489 CTTNBP2NLQ9P2B4 639 aa27.13■■□□□ 1.93
TMEM55B-201ENST00000250489 NFU1Q9UMS0 254 aa27.13■■□□□ 1.93
TMEM55B-201ENST00000250489 DIS3Q9Y2L1 958 aaKnown RBP27.13■■□□□ 1.93
TMEM55B-201ENST00000250489 UTRNP46939 3433 aa27.12■■□□□ 1.93
TMEM55B-201ENST00000250489 GOLGA6BA6NDN3 693 aa27.12■■□□□ 1.93
TMEM55B-201ENST00000250489 KRIT1O00522 736 aa27.12■■□□□ 1.93
TMEM55B-201ENST00000250489 KIAA0391O15091 583 aaKnown RBP27.12■■□□□ 1.93
TMEM55B-201ENST00000250489 RNF40O75150 1001 aa27.12■■□□□ 1.93
TMEM55B-201ENST00000250489 MMEP08473 750 aa27.12■■□□□ 1.93
TMEM55B-201ENST00000250489 RFC5P40937 340 aa27.12■■□□□ 1.93
TMEM55B-201ENST00000250489 TARBP2Q15633 366 aaKnown RBP27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms