RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 TSEN2Q8NCE0 465 aaKnown RBP23.4■■□□□ 1.34
CLN6-201ENST00000249806 HELQQ8TDG4 1101 aa23.4■■□□□ 1.34
CLN6-201ENST00000249806 EXOC4Q96A65 974 aa23.4■■□□□ 1.34
CLN6-201ENST00000249806 ISCUQ9H1K1 167 aa23.4■■□□□ 1.34
CLN6-201ENST00000249806 RAB20Q9NX57 234 aa23.4■■□□□ 1.34
CLN6-201ENST00000249806 GOLGA6BA6NDN3 693 aa23.39■■□□□ 1.34
CLN6-201ENST00000249806 ATG7O95352 703 aa23.39■■□□□ 1.34
CLN6-201ENST00000249806 FAM153BP0C7A2 387 aa23.39■■□□□ 1.34
CLN6-201ENST00000249806 ITGA4P13612 1032 aa23.39■■□□□ 1.34
CLN6-201ENST00000249806 ICAM3P32942 547 aa23.39■■□□□ 1.34
CLN6-201ENST00000249806 ALDH5A1P51649 535 aaPredicted RBP23.39■■□□□ 1.34
CLN6-201ENST00000249806 GPC3P51654 580 aa23.39■■□□□ 1.34
CLN6-201ENST00000249806 MFAP3P55082 362 aa23.39■■□□□ 1.34
CLN6-201ENST00000249806 FAM153CQ494X1 144 aa23.39■■□□□ 1.34
CLN6-201ENST00000249806 FBXL13Q8NEE6 735 aa23.39■■□□□ 1.34
CLN6-201ENST00000249806 TMC2Q8TDI7 906 aa23.39■■□□□ 1.34
CLN6-201ENST00000249806 CASKIN2Q8WXE0 1202 aa23.39■■□□□ 1.34
CLN6-201ENST00000249806 SHC3Q92529 594 aa23.39■■□□□ 1.34
CLN6-201ENST00000249806 TATDN2Q93075 761 aa23.39■■□□□ 1.34
CLN6-201ENST00000249806 R3HDMLQ9H3Y0 253 aa23.39■■□□□ 1.34
CLN6-201ENST00000249806 FAM153AQ9UHL3 310 aa23.39■■□□□ 1.34
CLN6-201ENST00000249806 NOCTQ9UK39 431 aaKnown RBP23.39■■□□□ 1.34
CLN6-201ENST00000249806 RASGEF1CQ8N431 466 aa23.39■■□□□ 1.33
CLN6-201ENST00000249806 PI4K2AQ9BTU6 479 aa23.39■■□□□ 1.33
CLN6-201ENST00000249806 KRIT1O00522 736 aa23.38■■□□□ 1.33
CLN6-201ENST00000249806 DDX3YO15523 660 aaKnown RBP23.38■■□□□ 1.33
CLN6-201ENST00000249806 DHX38Q92620 1227 aaKnown RBP23.38■■□□□ 1.33
CLN6-201ENST00000249806 DDX47Q9H0S4 455 aaKnown RBP23.38■■□□□ 1.33
CLN6-201ENST00000249806 DICER1Q9UPY3 1922 aaKnown RBP23.38■■□□□ 1.33
CLN6-201ENST00000249806 OATP04181 439 aa23.37■■□□□ 1.33
CLN6-201ENST00000249806 MMEP08473 750 aa23.37■■□□□ 1.33
CLN6-201ENST00000249806 GARTP22102 1010 aa23.37■■□□□ 1.33
CLN6-201ENST00000249806 LMAN1P49257 510 aa23.37■■□□□ 1.33
CLN6-201ENST00000249806 DCAF12L1Q5VU92 463 aa23.37■■□□□ 1.33
CLN6-201ENST00000249806 GADL1Q6ZQY3 521 aa23.37■■□□□ 1.33
CLN6-201ENST00000249806 NCAPG2Q86XI2 1143 aa23.37■■□□□ 1.33
CLN6-201ENST00000249806 CAVIN3Q969G5 261 aa23.37■■□□□ 1.33
CLN6-201ENST00000249806 FAM204AQ9H8W3 233 aa23.37■■□□□ 1.33
CLN6-201ENST00000249806 CTTNBP2NLQ9P2B4 639 aa23.37■■□□□ 1.33
CLN6-201ENST00000249806 IRF6O14896 467 aa23.37■■□□□ 1.33
CLN6-201ENST00000249806 SART1O43290 800 aaKnown RBP23.37■■□□□ 1.33
CLN6-201ENST00000249806 LMBRD2Q68DH5 695 aaPredicted RBP23.37■■□□□ 1.33
CLN6-201ENST00000249806 ASAP3Q8TDY4 903 aa23.37■■□□□ 1.33
CLN6-201ENST00000249806 NT5C1BQ96P26 610 aa23.37■■□□□ 1.33
CLN6-201ENST00000249806 CSADQ9Y600 493 aa23.37■■□□□ 1.33
CLN6-201ENST00000249806 LOC285556D6RIA3 1793 aa23.37■■□□□ 1.33
CLN6-201ENST00000249806 SOWAHBA6NEL2 793 aa23.36■■□□□ 1.33
CLN6-201ENST00000249806 RTN2O75298 545 aa23.36■■□□□ 1.33
CLN6-201ENST00000249806 UBA1P22314 1058 aaKnown RBP23.36■■□□□ 1.33
CLN6-201ENST00000249806 LIG4P49917 911 aa23.36■■□□□ 1.33
CLN6-201ENST00000249806 EEPD1Q7L9B9 569 aa23.36■■□□□ 1.33
CLN6-201ENST00000249806 RIOX2Q8IUF8 465 aa23.36■■□□□ 1.33
CLN6-201ENST00000249806 ZNF516Q92618 1163 aa23.36■■□□□ 1.33
CLN6-201ENST00000249806 CALR3Q96L12 384 aaKnown RBP23.36■■□□□ 1.33
CLN6-201ENST00000249806 DHX33Q9H6R0 707 aaKnown RBP23.36■■□□□ 1.33
CLN6-201ENST00000249806 ZNF233A6NK53 670 aa23.36■■□□□ 1.33
CLN6-201ENST00000249806 ATMINO43313 823 aaPredicted RBP23.36■■□□□ 1.33
CLN6-201ENST00000249806 GLRA2P23416 452 aa23.36■■□□□ 1.33
CLN6-201ENST00000249806 GPC5P78333 572 aa23.36■■□□□ 1.33
CLN6-201ENST00000249806 FMO1Q01740 532 aa23.36■■□□□ 1.33
CLN6-201ENST00000249806 RHOT2Q8IXI1 618 aa23.36■■□□□ 1.33
CLN6-201ENST00000249806 PAGR1Q9BTK6 254 aa23.36■■□□□ 1.33
CLN6-201ENST00000249806 MAF1Q9H063 256 aa23.36■■□□□ 1.33
CLN6-201ENST00000249806 SPATC1LQ9H0A9 340 aa23.36■■□□□ 1.33
CLN6-201ENST00000249806 ELP3Q9H9T3 547 aa23.36■■□□□ 1.33
CLN6-201ENST00000249806 ALG6Q9Y672 507 aa23.36■■□□□ 1.33
CLN6-201ENST00000249806 SBF1O95248 1867 aa23.35■■□□□ 1.33
CLN6-201ENST00000249806 GSTTP1A0A1W2PQM5 241 aa23.35■■□□□ 1.33
CLN6-201ENST00000249806 CALCAP01258 141 aa23.35■■□□□ 1.33
CLN6-201ENST00000249806 FGGP02679 453 aa23.35■■□□□ 1.33
CLN6-201ENST00000249806 CYP11B1P15538 503 aa23.35■■□□□ 1.33
CLN6-201ENST00000249806 ACOT2P49753 483 aa23.35■■□□□ 1.33
CLN6-201ENST00000249806 GUCY2FP51841 1108 aa23.35■■□□□ 1.33
CLN6-201ENST00000249806 WNT7BP56706 349 aa23.35■■□□□ 1.33
CLN6-201ENST00000249806 PAK2Q13177 524 aa23.35■■□□□ 1.33
CLN6-201ENST00000249806 USP37Q86T82 979 aa23.35■■□□□ 1.33
CLN6-201ENST00000249806 DCPSQ96C86 337 aaKnown RBP23.35■■□□□ 1.33
CLN6-201ENST00000249806 OTUD5Q96G74 571 aa23.35■■□□□ 1.33
CLN6-201ENST00000249806 ZBTB45Q96K62 511 aaPredicted RBP23.35■■□□□ 1.33
CLN6-201ENST00000249806 PCYT2Q99447 389 aa23.35■■□□□ 1.33
CLN6-201ENST00000249806 PORCNQ9H237 461 aa23.35■■□□□ 1.33
CLN6-201ENST00000249806 NR2E1Q9Y466 385 aa23.35■■□□□ 1.33
CLN6-201ENST00000249806 LRRIQ4A6NIV6 560 aa23.35■■□□□ 1.33
CLN6-201ENST00000249806 GTF2H1P32780 548 aa23.35■■□□□ 1.33
CLN6-201ENST00000249806 ERVK-9P63128 1117 aa23.35■■□□□ 1.33
CLN6-201ENST00000249806 SULF1Q8IWU6 871 aa23.35■■□□□ 1.33
CLN6-201ENST00000249806 FBXO41Q8TF61 875 aa23.35■■□□□ 1.33
CLN6-201ENST00000249806 CLMNQ96JQ2 1002 aa23.35■■□□□ 1.33
CLN6-201ENST00000249806 CEP89Q96ST8 783 aa23.35■■□□□ 1.33
CLN6-201ENST00000249806 HAPLN2Q9GZV7 340 aa23.35■■□□□ 1.33
CLN6-201ENST00000249806 PSD3Q9NYI0 1048 aa23.35■■□□□ 1.33
CLN6-201ENST00000249806 AMACRQ9UHK6 382 aa23.35■■□□□ 1.33
CLN6-201ENST00000249806 IGKV6D-21A0A0A0MT36 114 aa23.34■■□□□ 1.33
CLN6-201ENST00000249806 FARP2O94887 1054 aaPredicted RBP23.34■■□□□ 1.33
CLN6-201ENST00000249806 NLRP11P59045 1033 aaKnown RBP23.34■■□□□ 1.33
CLN6-201ENST00000249806 NAA35Q5VZE5 725 aa23.34■■□□□ 1.33
CLN6-201ENST00000249806 MOB2Q70IA6 237 aa23.34■■□□□ 1.33
CLN6-201ENST00000249806 ADARB2Q9NS39 739 aaKnown RBP23.34■■□□□ 1.33
CLN6-201ENST00000249806 FBXO40Q9UH90 709 aa23.34■■□□□ 1.33
CLN6-201ENST00000249806 ZNFX1Q9P2E3 1918 aaKnown RBP23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms