RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 LRRC27Q9C0I9 530 aa26.74■■□□□ 1.87
SDF2L1-201ENST00000248958 TLR9Q9NR96 1032 aa26.74■■□□□ 1.87
SDF2L1-201ENST00000248958 PCDHA7Q9UN72 937 aa26.74■■□□□ 1.87
SDF2L1-201ENST00000248958 TRAK2O60296 914 aa26.73■■□□□ 1.87
SDF2L1-201ENST00000248958 DNAJB1P25685 340 aa26.73■■□□□ 1.87
SDF2L1-201ENST00000248958 AXDND1Q5T1B0 1012 aaPredicted RBP26.73■■□□□ 1.87
SDF2L1-201ENST00000248958 EEF1DP3Q658K8 133 aa26.73■■□□□ 1.87
SDF2L1-201ENST00000248958 SHC4Q6S5L8 630 aa26.73■■□□□ 1.87
SDF2L1-201ENST00000248958 HAUS6Q7Z4H7 955 aa26.73■■□□□ 1.87
SDF2L1-201ENST00000248958 DDX12PQ92771 950 aa26.73■■□□□ 1.87
SDF2L1-201ENST00000248958 TMEM169Q96HH4 297 aa26.73■■□□□ 1.87
SDF2L1-201ENST00000248958 RPS6KC1Q96S38 1066 aa26.73■■□□□ 1.87
SDF2L1-201ENST00000248958 FAM13BQ9NYF5 915 aa26.73■■□□□ 1.87
SDF2L1-201ENST00000248958 STK39Q9UEW8 545 aa26.73■■□□□ 1.87
SDF2L1-201ENST00000248958 USP20Q9Y2K6 914 aa26.73■■□□□ 1.87
SDF2L1-201ENST00000248958 POMCP01189 267 aa26.72■■□□□ 1.87
SDF2L1-201ENST00000248958 ALDH2P05091 517 aa26.72■■□□□ 1.87
SDF2L1-201ENST00000248958 GALTP07902 379 aa26.72■■□□□ 1.87
SDF2L1-201ENST00000248958 AKAP5P24588 427 aa26.72■■□□□ 1.87
SDF2L1-201ENST00000248958 AAK1Q2M2I8 961 aa26.72■■□□□ 1.87
SDF2L1-201ENST00000248958 TCEAL5Q5H9L2 206 aa26.72■■□□□ 1.87
SDF2L1-201ENST00000248958 ZPBP2Q6X784 338 aa26.72■■□□□ 1.87
SDF2L1-201ENST00000248958 PDILTQ8N807 584 aa26.72■■□□□ 1.87
SDF2L1-201ENST00000248958 IQUBQ8NA54 791 aa26.72■■□□□ 1.87
SDF2L1-201ENST00000248958 HLA-CQ95604 372 aa26.72■■□□□ 1.87
SDF2L1-201ENST00000248958 PYM1Q9BRP8 204 aaKnown RBP26.72■■□□□ 1.87
SDF2L1-201ENST00000248958 TARS2Q9BW92 718 aaKnown RBP26.72■■□□□ 1.87
SDF2L1-201ENST00000248958 PANK2Q9BZ23 570 aa26.72■■□□□ 1.87
SDF2L1-201ENST00000248958 GBP3Q9H0R5 595 aa26.72■■□□□ 1.87
SDF2L1-201ENST00000248958 ZHX3Q9H4I2 956 aa26.72■■□□□ 1.87
SDF2L1-201ENST00000248958 PTPRHQ9HD43 1115 aa26.72■■□□□ 1.87
SDF2L1-201ENST00000248958 EYSQ5T1H1 3165 aa26.71■■□□□ 1.87
SDF2L1-201ENST00000248958 A0A087X0B3 334 aa26.71■■□□□ 1.87
SDF2L1-201ENST00000248958 DDHD2O94830 711 aa26.71■■□□□ 1.87
SDF2L1-201ENST00000248958 PBX3P40426 434 aa26.71■■□□□ 1.87
SDF2L1-201ENST00000248958 AFF1P51825 1210 aaKnown RBP26.71■■□□□ 1.87
SDF2L1-201ENST00000248958 NUCB2P80303 420 aa26.71■■□□□ 1.87
SDF2L1-201ENST00000248958 GRIK3Q13003 919 aa26.71■■□□□ 1.87
SDF2L1-201ENST00000248958 BMS1Q14692 1282 aaKnown RBP26.71■■□□□ 1.87
SDF2L1-201ENST00000248958 ZNF568Q3ZCX4 644 aa26.71■■□□□ 1.87
SDF2L1-201ENST00000248958 DYMQ7RTS9 669 aa26.71■■□□□ 1.87
SDF2L1-201ENST00000248958 ZNF280BQ86YH2 543 aa26.71■■□□□ 1.87
SDF2L1-201ENST00000248958 FAM178BQ8IXR5 827 aa26.71■■□□□ 1.87
SDF2L1-201ENST00000248958 MICAL1Q8TDZ2 1067 aa26.71■■□□□ 1.87
SDF2L1-201ENST00000248958 TCHPQ9BT92 498 aa26.71■■□□□ 1.87
SDF2L1-201ENST00000248958 TNMDQ9H2S6 317 aa26.71■■□□□ 1.87
SDF2L1-201ENST00000248958 PRDM6Q9NQX0 595 aa26.71■■□□□ 1.87
SDF2L1-201ENST00000248958 SNTG2Q9NY99 539 aa26.71■■□□□ 1.87
SDF2L1-201ENST00000248958 SEL1LQ9UBV2 794 aa26.71■■□□□ 1.87
SDF2L1-201ENST00000248958 FAN1Q9Y2M0 1017 aa26.71■■□□□ 1.87
SDF2L1-201ENST00000248958 K7ENM7 598 aa26.7■■□□□ 1.86
SDF2L1-201ENST00000248958 NR1I2O75469 434 aa26.7■■□□□ 1.86
SDF2L1-201ENST00000248958 TOM1L1O75674 476 aa26.7■■□□□ 1.86
SDF2L1-201ENST00000248958 MCF2P10911 925 aa26.7■■□□□ 1.86
SDF2L1-201ENST00000248958 GAP43P17677 238 aa26.7■■□□□ 1.86
SDF2L1-201ENST00000248958 PROZP22891 400 aa26.7■■□□□ 1.86
SDF2L1-201ENST00000248958 SCNN1GP51170 649 aa26.7■■□□□ 1.86
SDF2L1-201ENST00000248958 AMPD3Q01432 767 aa26.7■■□□□ 1.86
SDF2L1-201ENST00000248958 MPZL3Q6UWV2 235 aa26.7■■□□□ 1.86
SDF2L1-201ENST00000248958 IGSF21Q96ID5 467 aa26.7■■□□□ 1.86
SDF2L1-201ENST00000248958 SPATA32Q96LK8 384 aa26.7■■□□□ 1.86
SDF2L1-201ENST00000248958 ZFP42Q96MM3 310 aa26.7■■□□□ 1.86
SDF2L1-201ENST00000248958 CCDC94Q9BW85 323 aaPredicted RBP26.7■■□□□ 1.86
SDF2L1-201ENST00000248958 CDT1Q9H211 546 aa26.7■■□□□ 1.86
SDF2L1-201ENST00000248958 ST6GALNAC4Q9H4F1 302 aa26.7■■□□□ 1.86
SDF2L1-201ENST00000248958 NGRNQ9NPE2 291 aaKnown RBP26.7■■□□□ 1.86
SDF2L1-201ENST00000248958 DNAJB4Q9UDY4 337 aa26.7■■□□□ 1.86
SDF2L1-201ENST00000248958 TCHHQ07283 1943 aa26.69■■□□□ 1.86
SDF2L1-201ENST00000248958 FSD2A1L4K1 749 aa26.69■■□□□ 1.86
SDF2L1-201ENST00000248958 MYMKA6NI61 221 aa26.69■■□□□ 1.86
SDF2L1-201ENST00000248958 NT5C1B-RDH14C9J2C7 533 aa26.69■■□□□ 1.86
SDF2L1-201ENST00000248958 RECQL4O94761 1208 aa26.69■■□□□ 1.86
SDF2L1-201ENST00000248958 SLC11A1P49279 550 aa26.69■■□□□ 1.86
SDF2L1-201ENST00000248958 DSC1Q08554 894 aa26.69■■□□□ 1.86
SDF2L1-201ENST00000248958 E2F4Q16254 413 aa26.69■■□□□ 1.86
SDF2L1-201ENST00000248958 RESP18Q5W5W9 173 aa26.69■■□□□ 1.86
SDF2L1-201ENST00000248958 COLGALT2Q8IYK4 626 aa26.69■■□□□ 1.86
SDF2L1-201ENST00000248958 GSTCDQ8NEC7 633 aa26.69■■□□□ 1.86
SDF2L1-201ENST00000248958 SCAND2PQ9GZW5 306 aaPredicted RBP26.69■■□□□ 1.86
SDF2L1-201ENST00000248958 MAGEF1Q9HAY2 307 aa26.69■■□□□ 1.86
SDF2L1-201ENST00000248958 MIOSQ9NXC5 875 aa26.69■■□□□ 1.86
SDF2L1-201ENST00000248958 KLK14Q9P0G3 267 aa26.69■■□□□ 1.86
SDF2L1-201ENST00000248958 FSCN2O14926 492 aa26.68■■□□□ 1.86
SDF2L1-201ENST00000248958 IRS1P35568 1242 aa26.68■■□□□ 1.86
SDF2L1-201ENST00000248958 GRM5P41594 1212 aa26.68■■□□□ 1.86
SDF2L1-201ENST00000248958 MRPS5P82675 430 aaKnown RBP26.68■■□□□ 1.86
SDF2L1-201ENST00000248958 GTF2BQ00403 316 aa26.68■■□□□ 1.86
SDF2L1-201ENST00000248958 DDX53Q86TM3 631 aaKnown RBP26.68■■□□□ 1.86
SDF2L1-201ENST00000248958 LEO1Q8WVC0 666 aaPredicted RBP26.68■■□□□ 1.86
SDF2L1-201ENST00000248958 DNAJC19Q96DA6 116 aa26.68■■□□□ 1.86
SDF2L1-201ENST00000248958 PABPC5Q96DU9 382 aaKnown RBP26.68■■□□□ 1.86
SDF2L1-201ENST00000248958 TBX20Q9UMR3 447 aa26.68■■□□□ 1.86
SDF2L1-201ENST00000248958 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.67■■□□□ 1.86
SDF2L1-201ENST00000248958 NRP1O14786 923 aa26.67■■□□□ 1.86
SDF2L1-201ENST00000248958 YARSP54577 528 aaKnown RBP26.67■■□□□ 1.86
SDF2L1-201ENST00000248958 ERVFC1P60507 584 aa26.67■■□□□ 1.86
SDF2L1-201ENST00000248958 DHX58Q96C10 678 aa26.67■■□□□ 1.86
SDF2L1-201ENST00000248958 HVCN1Q96D96 273 aa26.67■■□□□ 1.86
SDF2L1-201ENST00000248958 BICD1Q96G01 975 aa26.67■■□□□ 1.86
SDF2L1-201ENST00000248958 FIZ1Q96SL8 496 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms