RNA–Protein interactions for RNA: ENST00000248550.7

PHTF2-201, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene PHTF2, Length 4,778 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-201ENST00000248550 TBC1D19Q8N5T2 526 aa3.86□□□□□ -1.79
PHTF2-201ENST00000248550 PDZD8Q8NEN9 1154 aa3.86□□□□□ -1.79
PHTF2-201ENST00000248550 LMX1AQ8TE12 382 aa3.86□□□□□ -1.79
PHTF2-201ENST00000248550 PPP1R16AQ96I34 528 aa3.86□□□□□ -1.79
PHTF2-201ENST00000248550 GMCL1Q96IK5 515 aa3.86□□□□□ -1.79
PHTF2-201ENST00000248550 MMS19Q96T76 1030 aa3.86□□□□□ -1.79
PHTF2-201ENST00000248550 BICC1Q9H694 974 aaKnown RBP3.86□□□□□ -1.79
PHTF2-201ENST00000248550 CYP4F11Q9HBI6 524 aa3.86□□□□□ -1.79
PHTF2-201ENST00000248550 USP15Q9Y4E8 981 aaPredicted RBP3.86□□□□□ -1.79
PHTF2-201ENST00000248550 ARHGAP6O43182 974 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 SART1O43290 800 aaKnown RBP3.85□□□□□ -1.79
PHTF2-201ENST00000248550 CSF1RP07333 972 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 ODC1P11926 461 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 RRP1P56182 461 aaKnown RBP3.85□□□□□ -1.79
PHTF2-201ENST00000248550 TMPRSS3P57727 454 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 CBX1P83916 185 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 PHKG1Q16816 387 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 FILIP1LQ4L180 1135 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 SLFN12LQ6IEE8 588 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 ANKRD54Q6NXT1 300 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 CCDC73Q6ZRK6 1079 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 TRMT1LQ7Z2T5 733 aaKnown RBP3.85□□□□□ -1.79
PHTF2-201ENST00000248550 ANKRD33Q7Z3H0 272 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 FRMD5Q7Z6J6 570 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 FBXO33Q7Z6M2 555 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 LSM14AQ8ND56 463 aaKnown RBP3.85□□□□□ -1.79
PHTF2-201ENST00000248550 ARHGEF26Q96DR7 871 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 ZBED3Q96IU2 234 aaPredicted RBP3.85□□□□□ -1.79
PHTF2-201ENST00000248550 NCAPGQ9BPX3 1015 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 WDR6Q9NNW5 1121 aaKnown RBP3.85□□□□□ -1.79
PHTF2-201ENST00000248550 SLC9A2Q9UBY0 812 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 HBS1LQ9Y450 684 aaKnown RBP3.85□□□□□ -1.79
PHTF2-201ENST00000248550 COMMD10Q9Y6G5 202 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 LAMB1P07942 1786 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 ARAP2Q8WZ64 1704 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 H3BNC9 293 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 INPPL1O15357 1258 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 GJB5O95377 273 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 NR3C2P08235 984 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 HLA-EP13747 358 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 PNPLA4P41247 253 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 CDK8P49336 464 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 SMSP52788 366 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 SP2Q02086 613 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 TYRO3Q06418 890 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 ADCY1Q08828 1119 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 UBE3CQ15386 1083 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 GDF6Q6KF10 455 aaPredicted RBP3.85□□□□□ -1.79
PHTF2-201ENST00000248550 C1orf210Q8IVY1 113 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 SMAP1Q8IYB5 467 aaPredicted RBP3.85□□□□□ -1.79
PHTF2-201ENST00000248550 VPS52Q8N1B4 723 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 FAM174AQ8TBP5 190 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 ANKRD36BP1Q96IX9 119 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 ADAMTS10Q9H324 1103 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 LMAN1LQ9HAT1 526 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 TMEM63CQ9P1W3 806 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 FBXO10Q9UK96 956 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 PRG3Q9Y2Y8 225 aaPredicted RBP3.85□□□□□ -1.79
PHTF2-201ENST00000248550 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.85□□□□□ -1.79
PHTF2-201ENST00000248550 C2CD2LO14523 706 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 SLC30A4O14863 429 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 PER2O15055 1255 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 LZTS3O60299 673 aaPredicted RBP3.85□□□□□ -1.79
PHTF2-201ENST00000248550 MAN1A2O60476 641 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 EEF2P13639 858 aaKnown RBP3.85□□□□□ -1.79
PHTF2-201ENST00000248550 DRD2P14416 443 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 PDIA3P30101 505 aaKnown RBP3.85□□□□□ -1.79
PHTF2-201ENST00000248550 CCT8P50990 548 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 PPP4CP60510 307 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 HNRNPUQ00839 825 aaKnown RBP eCLIP3.85□□□□□ -1.79
PHTF2-201ENST00000248550 PPP2R3AQ06190 1150 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 DIXDC1Q155Q3 683 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 CTXN3Q4LDR2 81 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 EPC2Q52LR7 807 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 GRAMD4Q6IC98 578 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 TOGARAM2Q6ZUX3 1019 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 STAG2Q8N3U4 1231 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 PDCD7Q8N8D1 485 aaKnown RBP3.85□□□□□ -1.79
PHTF2-201ENST00000248550 OR6C4Q8NGE1 309 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 MYCBPAPQ8TBZ2 947 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 KCNE4Q8WWG9 221 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 FAM84BQ96KN1 310 aaPredicted RBP3.85□□□□□ -1.79
PHTF2-201ENST00000248550 IL12RB2Q99665 862 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 ACE2Q9BYF1 805 aaPredicted RBP3.85□□□□□ -1.79
PHTF2-201ENST00000248550 PBX4Q9BYU1 374 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 TRIT1Q9H3H1 467 aaKnown RBP3.85□□□□□ -1.79
PHTF2-201ENST00000248550 KCTD5Q9NXV2 234 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 PALD1Q9ULE6 856 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 HPCAL4Q9UM19 191 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.85□□□□□ -1.791e-7■■■□□ 17.9
PHTF2-201ENST00000248550 ATP6V1DQ9Y5K8 247 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 PSME4Q14997 1843 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 LRRIQ4A6NIV6 560 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 HMGB3O15347 200 aaKnown RBP3.85□□□□□ -1.79
PHTF2-201ENST00000248550 PRPF3O43395 683 aaKnown RBP3.85□□□□□ -1.79
PHTF2-201ENST00000248550 ANXA6P08133 673 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 CCDC172P0C7W6 258 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 CSH1P0DML2 217 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 CSH2P0DML3 217 aa3.85□□□□□ -1.79
PHTF2-201ENST00000248550 GCFC2P16383 781 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms