RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 NSUN6Q8TEA1 469 aaKnown RBP18.72■□□□□ 0.59
LRFN3-201ENST00000246529 SHC3Q92529 594 aa18.72■□□□□ 0.59
LRFN3-201ENST00000246529 FAM213AQ9BRX8 229 aa18.72■□□□□ 0.59
LRFN3-201ENST00000246529 HNRNPDLO14979 420 aaKnown RBP18.71■□□□□ 0.59
LRFN3-201ENST00000246529 COMTP21964 271 aa18.71■□□□□ 0.59
LRFN3-201ENST00000246529 MFAP3P55082 362 aa18.71■□□□□ 0.59
LRFN3-201ENST00000246529 SNRPFP62306 86 aaKnown RBP18.71■□□□□ 0.59
LRFN3-201ENST00000246529 PRKCEQ02156 737 aa18.71■□□□□ 0.59
LRFN3-201ENST00000246529 LMBRD2Q68DH5 695 aaPredicted RBP18.71■□□□□ 0.59
LRFN3-201ENST00000246529 TAS1R3Q7RTX0 852 aa18.71■□□□□ 0.59
LRFN3-201ENST00000246529 CENPHQ9H3R5 247 aa18.71■□□□□ 0.59
LRFN3-201ENST00000246529 TMEM8AQ9HCN3 771 aa18.71■□□□□ 0.59
LRFN3-201ENST00000246529 JPH1Q9HDC5 661 aaPredicted RBP18.71■□□□□ 0.59
LRFN3-201ENST00000246529 A1CFQ9NQ94 594 aaKnown RBP18.71■□□□□ 0.59
LRFN3-201ENST00000246529 CYP39A1Q9NYL5 469 aa18.71■□□□□ 0.59
LRFN3-201ENST00000246529 ACTR2P61160 394 aa18.71■□□□□ 0.59
LRFN3-201ENST00000246529 DCAF15Q66K64 600 aa18.71■□□□□ 0.59
LRFN3-201ENST00000246529 SV2AQ7L0J3 742 aa18.71■□□□□ 0.59
LRFN3-201ENST00000246529 CYFIP1Q7L576 1253 aa18.71■□□□□ 0.59
LRFN3-201ENST00000246529 KIFAP3Q92845 792 aa18.71■□□□□ 0.59
LRFN3-201ENST00000246529 BICD1Q96G01 975 aa18.71■□□□□ 0.59
LRFN3-201ENST00000246529 SENP7Q9BQF6 1050 aa18.71■□□□□ 0.59
LRFN3-201ENST00000246529 RAB20Q9NX57 234 aa18.71■□□□□ 0.59
LRFN3-201ENST00000246529 CYP11B1P15538 503 aa18.7■□□□□ 0.58
LRFN3-201ENST00000246529 PTENP60484 403 aa18.7■□□□□ 0.58
LRFN3-201ENST00000246529 SP2Q02086 613 aa18.7■□□□□ 0.58
LRFN3-201ENST00000246529 CYP24A1Q07973 514 aa18.7■□□□□ 0.58
LRFN3-201ENST00000246529 FSTL1Q12841 308 aa18.7■□□□□ 0.58
LRFN3-201ENST00000246529 MTERF2Q49AM1 385 aa18.7■□□□□ 0.58
LRFN3-201ENST00000246529 ZNF526Q8TF50 670 aaPredicted RBP18.7■□□□□ 0.58
LRFN3-201ENST00000246529 ATP6V0A1Q93050 837 aa18.7■□□□□ 0.58
LRFN3-201ENST00000246529 NTPCRQ9BSD7 190 aaKnown RBP18.7■□□□□ 0.58
LRFN3-201ENST00000246529 AS3MTQ9HBK9 375 aa18.7■□□□□ 0.58
LRFN3-201ENST00000246529 PPFIA4O75335 1185 aa18.7■□□□□ 0.58
LRFN3-201ENST00000246529 PSAPP07602 524 aa18.7■□□□□ 0.58
LRFN3-201ENST00000246529 C11orf63Q6NUN7 778 aa18.7■□□□□ 0.58
LRFN3-201ENST00000246529 CD302Q8IX05 232 aa18.7■□□□□ 0.58
LRFN3-201ENST00000246529 FBXL13Q8NEE6 735 aa18.7■□□□□ 0.58
LRFN3-201ENST00000246529 RDM1Q8NG50 284 aa18.7■□□□□ 0.58
LRFN3-201ENST00000246529 ATP8B4Q8TF62 1192 aa18.7■□□□□ 0.58
LRFN3-201ENST00000246529 UBLCP1Q8WVY7 318 aaPredicted RBP18.7■□□□□ 0.58
LRFN3-201ENST00000246529 SPIRE2Q8WWL2 714 aa18.7■□□□□ 0.58
LRFN3-201ENST00000246529 MFSD14AQ96MC6 490 aa18.7■□□□□ 0.58
LRFN3-201ENST00000246529 SLC9A2Q9UBY0 812 aa18.7■□□□□ 0.58
LRFN3-201ENST00000246529 ZNF112Q9UJU3 913 aa18.7■□□□□ 0.58
LRFN3-201ENST00000246529 UTP11Q9Y3A2 253 aaKnown RBP18.7■□□□□ 0.58
LRFN3-201ENST00000246529 RRP15Q9Y3B9 282 aaKnown RBP18.7■□□□□ 0.58
LRFN3-201ENST00000246529 ZNF541Q9H0D2 1346 aa18.7■□□□□ 0.58
LRFN3-201ENST00000246529 H0YGN5 161 aa18.69■□□□□ 0.58
LRFN3-201ENST00000246529 PMM2O15305 246 aa18.69■□□□□ 0.58
LRFN3-201ENST00000246529 FDX1P10109 184 aa18.69■□□□□ 0.58
LRFN3-201ENST00000246529 GPC3P51654 580 aa18.69■□□□□ 0.58
LRFN3-201ENST00000246529 HADHBP55084 474 aaKnown RBP18.69■□□□□ 0.58
LRFN3-201ENST00000246529 WNT7BP56706 349 aa18.69■□□□□ 0.58
LRFN3-201ENST00000246529 DR1Q01658 176 aa18.69■□□□□ 0.58
LRFN3-201ENST00000246529 XRRA1Q6P2D8 792 aa18.69■□□□□ 0.58
LRFN3-201ENST00000246529 SRLQ86TD4 932 aa18.69■□□□□ 0.58
LRFN3-201ENST00000246529 ZDHHC14Q8IZN3 488 aa18.69■□□□□ 0.58
LRFN3-201ENST00000246529 EIF1ADQ8N9N8 165 aaKnown RBP18.69■□□□□ 0.58
LRFN3-201ENST00000246529 SLC17A8Q8NDX2 589 aa18.69■□□□□ 0.58
LRFN3-201ENST00000246529 VTI1AQ96AJ9 217 aa18.69■□□□□ 0.58
LRFN3-201ENST00000246529 C18orf8Q96DM3 657 aa18.69■□□□□ 0.58
LRFN3-201ENST00000246529 NT5C1BQ96P26 610 aa18.69■□□□□ 0.58
LRFN3-201ENST00000246529 NUP85Q9BW27 656 aa18.69■□□□□ 0.58
LRFN3-201ENST00000246529 POLR3FQ9H1D9 316 aaPredicted RBP18.69■□□□□ 0.58
LRFN3-201ENST00000246529 LRRC4CQ9HCJ2 640 aa18.69■□□□□ 0.58
LRFN3-201ENST00000246529 PDLIM7Q9NR12 457 aa18.69■□□□□ 0.58
LRFN3-201ENST00000246529 CYP26B1Q9NR63 512 aa18.69■□□□□ 0.58
LRFN3-201ENST00000246529 COQ4Q9Y3A0 265 aa18.69■□□□□ 0.58
LRFN3-201ENST00000246529 NFS1Q9Y697 457 aa18.69■□□□□ 0.58
LRFN3-201ENST00000246529 EIF3HO15372 352 aaKnown RBP eCLIP18.69■□□□□ 0.58
LRFN3-201ENST00000246529 CTNNA1P35221 906 aaKnown RBP18.69■□□□□ 0.58
LRFN3-201ENST00000246529 LLGL1Q15334 1064 aa18.69■□□□□ 0.58
LRFN3-201ENST00000246529 TRPM4Q8TD43 1214 aa18.69■□□□□ 0.58
LRFN3-201ENST00000246529 ZNF653Q96CK0 615 aa18.69■□□□□ 0.58
LRFN3-201ENST00000246529 FBXL18Q96ME1 805 aa18.69■□□□□ 0.58
LRFN3-201ENST00000246529 ZSWIM1Q9BR11 485 aa18.69■□□□□ 0.58
LRFN3-201ENST00000246529 ADAMTS5Q9UNA0 930 aa18.69■□□□□ 0.58
LRFN3-201ENST00000246529 TRPC6Q9Y210 931 aa18.69■□□□□ 0.58
LRFN3-201ENST00000246529 DIS3Q9Y2L1 958 aaKnown RBP18.69■□□□□ 0.58
LRFN3-201ENST00000246529 TULP2O00295 520 aa18.68■□□□□ 0.58
LRFN3-201ENST00000246529 TRIM66O15016 1216 aa18.68■□□□□ 0.58
LRFN3-201ENST00000246529 KRT5P13647 590 aa18.68■□□□□ 0.58
LRFN3-201ENST00000246529 ABHD15Q6UXT9 468 aa18.68■□□□□ 0.58
LRFN3-201ENST00000246529 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.68■□□□□ 0.58
LRFN3-201ENST00000246529 SEC14L1Q92503 715 aa18.68■□□□□ 0.58
LRFN3-201ENST00000246529 ZNF516Q92618 1163 aa18.68■□□□□ 0.58
LRFN3-201ENST00000246529 TMEM143Q96AN5 459 aa18.68■□□□□ 0.58
LRFN3-201ENST00000246529 HVCN1Q96D96 273 aa18.68■□□□□ 0.58
LRFN3-201ENST00000246529 ATP6V1G3Q96LB4 118 aa18.68■□□□□ 0.58
LRFN3-201ENST00000246529 PNMA2Q9UL42 364 aa18.68■□□□□ 0.58
LRFN3-201ENST00000246529 COL11A1P12107 1806 aaPredicted RBP18.68■□□□□ 0.58
LRFN3-201ENST00000246529 TCRBV7S2A1N4TA0A589 114 aa18.68■□□□□ 0.58
LRFN3-201ENST00000246529 SKOR1P84550 965 aa18.68■□□□□ 0.58
LRFN3-201ENST00000246529 GUCY1A3Q02108 690 aa18.68■□□□□ 0.58
LRFN3-201ENST00000246529 DLK2Q6UY11 383 aa18.68■□□□□ 0.58
LRFN3-201ENST00000246529 TMC3Q7Z5M5 1100 aa18.68■□□□□ 0.58
LRFN3-201ENST00000246529 PHLDB2Q86SQ0 1253 aa18.68■□□□□ 0.58
LRFN3-201ENST00000246529 GPD1LQ8N335 351 aa18.68■□□□□ 0.58
LRFN3-201ENST00000246529 ZNF564Q8TBZ8 553 aaPredicted RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms