RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 C6orf50Q9HD87 102 aa9.36□□□□□ -0.91
IFT43-201ENST00000238628 TBC1D13Q9NVG8 400 aa9.36□□□□□ -0.91
IFT43-201ENST00000238628 INPP5FQ9Y2H2 1132 aa9.36□□□□□ -0.91
IFT43-201ENST00000238628 GPSM3Q9Y4H4 160 aa9.36□□□□□ -0.91
IFT43-201ENST00000238628 A0A087WZ62 844 aa9.35□□□□□ -0.91
IFT43-201ENST00000238628 ADAMTS3O15072 1205 aa9.35□□□□□ -0.91
IFT43-201ENST00000238628 OFD1O75665 1012 aa9.35□□□□□ -0.91
IFT43-201ENST00000238628 RFPL2O75678 378 aa9.35□□□□□ -0.91
IFT43-201ENST00000238628 ALDH2P05091 517 aa9.35□□□□□ -0.91
IFT43-201ENST00000238628 SFPQP23246 707 aaKnown RBP eCLIP9.35□□□□□ -0.91
IFT43-201ENST00000238628 GNA11P29992 359 aa9.35□□□□□ -0.91
IFT43-201ENST00000238628 CDC27P30260 824 aa9.35□□□□□ -0.91
IFT43-201ENST00000238628 CIITAP33076 1130 aa9.35□□□□□ -0.91
IFT43-201ENST00000238628 CXCL12P48061 93 aa9.35□□□□□ -0.91
IFT43-201ENST00000238628 SLC11A1P49279 550 aa9.35□□□□□ -0.91
IFT43-201ENST00000238628 DNM2P50570 870 aa9.35□□□□□ -0.91
IFT43-201ENST00000238628 PRKCEQ02156 737 aa9.35□□□□□ -0.91
IFT43-201ENST00000238628 FZD5Q13467 585 aa9.35□□□□□ -0.91
IFT43-201ENST00000238628 DRP2Q13474 957 aa9.35□□□□□ -0.91
IFT43-201ENST00000238628 RNF20Q5VTR2 975 aa9.35□□□□□ -0.91
IFT43-201ENST00000238628 GLB1LQ6UWU2 654 aa9.35□□□□□ -0.91
IFT43-201ENST00000238628 DHX32Q7L7V1 743 aaKnown RBP9.35□□□□□ -0.91
IFT43-201ENST00000238628 REXO1Q8N1G1 1221 aaKnown RBP9.35□□□□□ -0.91
IFT43-201ENST00000238628 CCDC12Q8WUD4 166 aaPredicted RBP9.35□□□□□ -0.91
IFT43-201ENST00000238628 BCL7CQ8WUZ0 217 aaPredicted RBP9.35□□□□□ -0.91
IFT43-201ENST00000238628 PGBD4Q96DM1 585 aa9.35□□□□□ -0.91
IFT43-201ENST00000238628 FAM193BQ96PV7 902 aaPredicted RBP9.35□□□□□ -0.91
IFT43-201ENST00000238628 FDXACB1Q9BRP7 624 aaPredicted RBP9.35□□□□□ -0.91
IFT43-201ENST00000238628 ESYT1Q9BSJ8 1104 aa9.35□□□□□ -0.91
IFT43-201ENST00000238628 TRAIPQ9BWF2 469 aa9.35□□□□□ -0.91
IFT43-201ENST00000238628 ZMYND12Q9H0C1 365 aa9.35□□□□□ -0.91
IFT43-201ENST00000238628 ANO2Q9NQ90 1003 aa9.35□□□□□ -0.91
IFT43-201ENST00000238628 MRPL17Q9NRX2 175 aaKnown RBP9.35□□□□□ -0.91
IFT43-201ENST00000238628 FAM105AQ9NUU6 356 aa9.35□□□□□ -0.91
IFT43-201ENST00000238628 DNAJB4Q9UDY4 337 aa9.35□□□□□ -0.91
IFT43-201ENST00000238628 NAP1L2Q9ULW6 460 aaPredicted RBP9.35□□□□□ -0.91
IFT43-201ENST00000238628 NDRG2Q9UN36 371 aaKnown RBP9.35□□□□□ -0.91
IFT43-201ENST00000238628 ZFP37Q9Y6Q3 630 aaPredicted RBP9.35□□□□□ -0.91
IFT43-201ENST00000238628 ASXL3Q9C0F0 2248 aa9.35□□□□□ -0.91
IFT43-201ENST00000238628 GREB1Q4ZG55 1949 aa9.35□□□□□ -0.91
IFT43-201ENST00000238628 MYH15Q9Y2K3 1946 aa9.35□□□□□ -0.91
IFT43-201ENST00000238628 MTCL1Q9Y4B5 1905 aaKnown RBP9.35□□□□□ -0.91
IFT43-201ENST00000238628 KLF18A0A0U1RQI7 1052 aa9.34□□□□□ -0.91
IFT43-201ENST00000238628 ESYT2A0FGR8 921 aa9.34□□□□□ -0.91
IFT43-201ENST00000238628 MEIS3P2A8K0S8 358 aa9.34□□□□□ -0.91
IFT43-201ENST00000238628 MSH4O15457 936 aa9.34□□□□□ -0.91
IFT43-201ENST00000238628 CHMP2AO43633 222 aa9.34□□□□□ -0.91
IFT43-201ENST00000238628 GAS7O60861 476 aa9.34□□□□□ -0.91
IFT43-201ENST00000238628 ZNF623O75123 536 aa9.34□□□□□ -0.91
IFT43-201ENST00000238628 SFNP31947 248 aa9.34□□□□□ -0.91
IFT43-201ENST00000238628 ADD1P35611 737 aaKnown RBP9.34□□□□□ -0.91
IFT43-201ENST00000238628 JAK3P52333 1124 aa9.34□□□□□ -0.91
IFT43-201ENST00000238628 TARBP2Q15633 366 aaKnown RBP9.34□□□□□ -0.91
IFT43-201ENST00000238628 UGCGQ16739 394 aa9.34□□□□□ -0.91
IFT43-201ENST00000238628 MTERF2Q49AM1 385 aa9.34□□□□□ -0.91
IFT43-201ENST00000238628 SH3PXD2AQ5TCZ1 1133 aa9.34□□□□□ -0.91
IFT43-201ENST00000238628 KIAA1211LQ6NV74 962 aa9.34□□□□□ -0.91
IFT43-201ENST00000238628 MAMSTRQ6ZN01 415 aa9.34□□□□□ -0.91
IFT43-201ENST00000238628 MTSS1LQ765P7 747 aa9.34□□□□□ -0.91
IFT43-201ENST00000238628 PROSER1Q86XN7 944 aa9.34□□□□□ -0.91
IFT43-201ENST00000238628 ZNF280BQ86YH2 543 aa9.34□□□□□ -0.91
IFT43-201ENST00000238628 RHPN2Q8IUC4 686 aa9.34□□□□□ -0.91
IFT43-201ENST00000238628 URGCPQ8TCY9 931 aa9.34□□□□□ -0.91
IFT43-201ENST00000238628 CCDC136Q96JN2 1154 aa9.34□□□□□ -0.91
IFT43-201ENST00000238628 IER2Q9BTL4 223 aa9.34□□□□□ -0.91
IFT43-201ENST00000238628 VN1R3Q9BXE9 311 aa9.34□□□□□ -0.91
IFT43-201ENST00000238628 TEKT3Q9BXF9 490 aa9.34□□□□□ -0.91
IFT43-201ENST00000238628 NIFKQ9BYG3 293 aaKnown RBP9.34□□□□□ -0.91
IFT43-201ENST00000238628 CHRDQ9H2X0 955 aa9.34□□□□□ -0.91
IFT43-201ENST00000238628 CACNA2D2Q9NY47 1150 aa9.34□□□□□ -0.91
IFT43-201ENST00000238628 STK39Q9UEW8 545 aa9.34□□□□□ -0.91
IFT43-201ENST00000238628 PIN4Q9Y237 131 aaKnown RBP9.34□□□□□ -0.91
IFT43-201ENST00000238628 FAN1Q9Y2M0 1017 aa9.34□□□□□ -0.91
IFT43-201ENST00000238628 NEUROG3Q9Y4Z2 214 aa9.34□□□□□ -0.91
IFT43-201ENST00000238628 CCDC196A0A1B0GTZ2 297 aa9.33□□□□□ -0.92
IFT43-201ENST00000238628 C2CD2LO14523 706 aa9.33□□□□□ -0.92
IFT43-201ENST00000238628 PRPF3O43395 683 aaKnown RBP9.33□□□□□ -0.92
IFT43-201ENST00000238628 LILRB3O75022 631 aa9.33□□□□□ -0.92
IFT43-201ENST00000238628 DDHD2O94830 711 aa9.33□□□□□ -0.92
IFT43-201ENST00000238628 GLUD1P00367 558 aa9.33□□□□□ -0.92
IFT43-201ENST00000238628 ADH1AP07327 375 aa9.33□□□□□ -0.92
IFT43-201ENST00000238628 SPATA31D3P0C874 917 aa9.33□□□□□ -0.92
IFT43-201ENST00000238628 FSHRP23945 695 aa9.33□□□□□ -0.92
IFT43-201ENST00000238628 RAB27AP51159 221 aa9.33□□□□□ -0.92
IFT43-201ENST00000238628 USP11P51784 963 aa9.33□□□□□ -0.92
IFT43-201ENST00000238628 AK2P54819 239 aa9.33□□□□□ -0.92
IFT43-201ENST00000238628 FGD1P98174 961 aa9.33□□□□□ -0.92
IFT43-201ENST00000238628 XKR3Q5GH77 459 aa9.33□□□□□ -0.92
IFT43-201ENST00000238628 DAB2IPQ5VWQ8 1189 aa9.33□□□□□ -0.92
IFT43-201ENST00000238628 HEATR6Q6AI08 1181 aaKnown RBP9.33□□□□□ -0.92
IFT43-201ENST00000238628 SPATA31D4Q6ZUB0 917 aa9.33□□□□□ -0.92
IFT43-201ENST00000238628 CATSPER4Q7RTX7 472 aa9.33□□□□□ -0.92
IFT43-201ENST00000238628 MIER3Q7Z3K6 550 aa9.33□□□□□ -0.92
IFT43-201ENST00000238628 ZNF410Q86VK4 478 aa9.33□□□□□ -0.92
IFT43-201ENST00000238628 LONP2Q86WA8 852 aa9.33□□□□□ -0.92
IFT43-201ENST00000238628 BICD2Q8TD16 824 aa9.33□□□□□ -0.92
IFT43-201ENST00000238628 LENG9Q96B70 501 aa9.33□□□□□ -0.92
IFT43-201ENST00000238628 ZNF707Q96C28 371 aaPredicted RBP9.33□□□□□ -0.92
IFT43-201ENST00000238628 RIT2Q99578 217 aa9.33□□□□□ -0.92
IFT43-201ENST00000238628 SH2D3AQ9BRG2 576 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms