RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 YWHABP31946 246 aaKnown RBP20.12■□□□□ 0.81
CPSF3-201ENST00000238112 PEX3P56589 373 aa20.12■□□□□ 0.81
CPSF3-201ENST00000238112 SLC47A2Q86VL8 602 aa20.12■□□□□ 0.81
CPSF3-201ENST00000238112 IL31RAQ8NI17 732 aa20.12■□□□□ 0.81
CPSF3-201ENST00000238112 ZNF653Q96CK0 615 aa20.12■□□□□ 0.81
CPSF3-201ENST00000238112 SH2D3AQ9BRG2 576 aa20.12■□□□□ 0.81
CPSF3-201ENST00000238112 FAM129AQ9BZQ8 928 aa20.12■□□□□ 0.81
CPSF3-201ENST00000238112 AGO4Q9HCK5 861 aaKnown RBP20.12■□□□□ 0.81
CPSF3-201ENST00000238112 COL20A1Q9P218 1284 aa20.12■□□□□ 0.81
CPSF3-201ENST00000238112 MMEP08473 750 aa20.11■□□□□ 0.81
CPSF3-201ENST00000238112 ADCY2Q08462 1091 aa20.11■□□□□ 0.81
CPSF3-201ENST00000238112 DLGAP5Q15398 846 aa20.11■□□□□ 0.81
CPSF3-201ENST00000238112 TKFCQ3LXA3 575 aa20.11■□□□□ 0.81
CPSF3-201ENST00000238112 ZDHHC14Q8IZN3 488 aa20.11■□□□□ 0.81
CPSF3-201ENST00000238112 SUPT20HQ8NEM7 779 aa20.11■□□□□ 0.81
CPSF3-201ENST00000238112 CD101Q93033 1021 aa20.11■□□□□ 0.81
CPSF3-201ENST00000238112 KREMEN1Q96MU8 473 aa20.11■□□□□ 0.81
CPSF3-201ENST00000238112 ST6GALNAC4Q9H4F1 302 aa20.11■□□□□ 0.81
CPSF3-201ENST00000238112 AZI2Q9H6S1 392 aa20.11■□□□□ 0.81
CPSF3-201ENST00000238112 CNOT7Q9UIV1 285 aaKnown RBP20.11■□□□□ 0.81
CPSF3-201ENST00000238112 CHN1P15882 459 aa20.11■□□□□ 0.81
CPSF3-201ENST00000238112 COILP38432 576 aaPredicted RBP20.11■□□□□ 0.81
CPSF3-201ENST00000238112 CAP2P40123 477 aa20.11■□□□□ 0.81
CPSF3-201ENST00000238112 MTMR1Q13613 665 aa20.11■□□□□ 0.81
CPSF3-201ENST00000238112 SLMAPQ14BN4 828 aa20.11■□□□□ 0.81
CPSF3-201ENST00000238112 C6orf118Q5T5N4 469 aa20.11■□□□□ 0.81
CPSF3-201ENST00000238112 SLC13A5Q86YT5 568 aaPredicted RBP20.11■□□□□ 0.81
CPSF3-201ENST00000238112 CCDC114Q96M63 670 aa20.11■□□□□ 0.81
CPSF3-201ENST00000238112 CEP89Q96ST8 783 aa20.11■□□□□ 0.81
CPSF3-201ENST00000238112 TIPINQ9BVW5 301 aa20.11■□□□□ 0.81
CPSF3-201ENST00000238112 SEMA4AQ9H3S1 761 aa20.11■□□□□ 0.81
CPSF3-201ENST00000238112 VEZTQ9HBM0 779 aa20.11■□□□□ 0.81
CPSF3-201ENST00000238112 ACP6Q9NPH0 428 aa20.11■□□□□ 0.81
CPSF3-201ENST00000238112 USP20Q9Y2K6 914 aa20.11■□□□□ 0.81
CPSF3-201ENST00000238112 PTPN22Q9Y2R2 807 aa20.11■□□□□ 0.81
CPSF3-201ENST00000238112 PASKQ96RG2 1323 aa20.11■□□□□ 0.81
CPSF3-201ENST00000238112 NFIBO00712 420 aa20.1■□□□□ 0.81
CPSF3-201ENST00000238112 CYP1A2P05177 515 aa20.1■□□□□ 0.81
CPSF3-201ENST00000238112 ADRB2P07550 413 aa20.1■□□□□ 0.81
CPSF3-201ENST00000238112 DRD4P21917 467 aa20.1■□□□□ 0.81
CPSF3-201ENST00000238112 PDE6CP51160 858 aa20.1■□□□□ 0.81
CPSF3-201ENST00000238112 FMO1Q01740 532 aa20.1■□□□□ 0.81
CPSF3-201ENST00000238112 SNRNP35Q16560 246 aaKnown RBP20.1■□□□□ 0.81
CPSF3-201ENST00000238112 CYP1B1Q16678 543 aa20.1■□□□□ 0.81
CPSF3-201ENST00000238112 TBC1D10BQ4KMP7 808 aaPredicted RBP20.1■□□□□ 0.81
CPSF3-201ENST00000238112 MIGA2Q7L4E1 593 aa20.1■□□□□ 0.81
CPSF3-201ENST00000238112 TRMT1LQ7Z2T5 733 aaKnown RBP20.1■□□□□ 0.81
CPSF3-201ENST00000238112 SHC3Q92529 594 aa20.1■□□□□ 0.81
CPSF3-201ENST00000238112 BTBD6Q96KE9 485 aa20.1■□□□□ 0.81
CPSF3-201ENST00000238112 GLIS2Q9BZE0 524 aaPredicted RBP20.1■□□□□ 0.81
CPSF3-201ENST00000238112 GPRC5CQ9NQ84 441 aa20.1■□□□□ 0.81
CPSF3-201ENST00000238112 GTF3C4Q9UKN8 822 aa20.1■□□□□ 0.81
CPSF3-201ENST00000238112 EXOC7Q9UPT5 735 aa20.1■□□□□ 0.81
CPSF3-201ENST00000238112 PCDHA3Q9Y5H8 950 aa20.1■□□□□ 0.81
CPSF3-201ENST00000238112 LYPLA2O95372 231 aa20.1■□□□□ 0.81
CPSF3-201ENST00000238112 ALAS1P13196 640 aa20.1■□□□□ 0.81
CPSF3-201ENST00000238112 PTGER2P43116 358 aa20.1■□□□□ 0.81
CPSF3-201ENST00000238112 MMP13P45452 471 aa20.1■□□□□ 0.81
CPSF3-201ENST00000238112 SMTNP53814 917 aa20.1■□□□□ 0.81
CPSF3-201ENST00000238112 RWDD2BP57060 319 aa20.1■□□□□ 0.81
CPSF3-201ENST00000238112 KRT39Q6A163 491 aa20.1■□□□□ 0.81
CPSF3-201ENST00000238112 MCF2L2Q86YR7 1114 aa20.1■□□□□ 0.81
CPSF3-201ENST00000238112 CBWD2Q8IUF1 395 aa20.1■□□□□ 0.81
CPSF3-201ENST00000238112 SLC17A8Q8NDX2 589 aa20.1■□□□□ 0.81
CPSF3-201ENST00000238112 CCDC127Q96BQ5 260 aa20.1■□□□□ 0.81
CPSF3-201ENST00000238112 UVRAGQ9P2Y5 699 aa20.1■□□□□ 0.81
CPSF3-201ENST00000238112 TCEAL9Q9UHQ7 104 aa20.1■□□□□ 0.81
CPSF3-201ENST00000238112 TCRBV7S2A1N4TA0A589 114 aa20.09■□□□□ 0.81
CPSF3-201ENST00000238112 AGTP01019 485 aa20.09■□□□□ 0.81
CPSF3-201ENST00000238112 CYP11B1P15538 503 aa20.09■□□□□ 0.81
CPSF3-201ENST00000238112 FGFR4P22455 802 aa20.09■□□□□ 0.81
CPSF3-201ENST00000238112 NCKAP1LP55160 1127 aa20.09■□□□□ 0.81
CPSF3-201ENST00000238112 FAM102BQ5T8I3 360 aa20.09■□□□□ 0.81
CPSF3-201ENST00000238112 CYFIP1Q7L576 1253 aa20.09■□□□□ 0.81
CPSF3-201ENST00000238112 OSBPL7Q9BZF2 842 aa20.09■□□□□ 0.81
CPSF3-201ENST00000238112 STMN4Q9H169 189 aaPredicted RBP20.09■□□□□ 0.81
CPSF3-201ENST00000238112 TBC1D22BQ9NU19 505 aa20.09■□□□□ 0.81
CPSF3-201ENST00000238112 UBIAD1Q9Y5Z9 338 aa20.09■□□□□ 0.81
CPSF3-201ENST00000238112 CNTNAP1P78357 1384 aa20.09■□□□□ 0.81
CPSF3-201ENST00000238112 TMEM150BA6NC51 233 aa20.09■□□□□ 0.81
CPSF3-201ENST00000238112 PCNX4Q63HM2 1172 aa20.09■□□□□ 0.81
CPSF3-201ENST00000238112 RSBN1LQ6PCB5 846 aaPredicted RBP20.09■□□□□ 0.81
CPSF3-201ENST00000238112 OGFOD1Q8N543 542 aa20.09■□□□□ 0.81
CPSF3-201ENST00000238112 UHMK1Q8TAS1 419 aaKnown RBP20.09■□□□□ 0.81
CPSF3-201ENST00000238112 SEMA4DQ92854 862 aa20.09■□□□□ 0.81
CPSF3-201ENST00000238112 SAAL1Q96ER3 474 aa20.09■□□□□ 0.81
CPSF3-201ENST00000238112 PLVAPQ9BX97 442 aa20.09■□□□□ 0.81
CPSF3-201ENST00000238112 ZNF536O15090 1300 aa20.08■□□□□ 0.81
CPSF3-201ENST00000238112 ECEL1O95672 775 aa20.08■□□□□ 0.81
CPSF3-201ENST00000238112 RARAP10276 462 aa20.08■□□□□ 0.81
CPSF3-201ENST00000238112 RARGP13631 454 aa20.08■□□□□ 0.81
CPSF3-201ENST00000238112 CDR2Q01850 454 aa20.08■□□□□ 0.81
CPSF3-201ENST00000238112 CALCOCO2Q13137 446 aa20.08■□□□□ 0.81
CPSF3-201ENST00000238112 PPP1R7Q15435 360 aa20.08■□□□□ 0.81
CPSF3-201ENST00000238112 ANKRD20A8PQ5CZ79 823 aa20.08■□□□□ 0.81
CPSF3-201ENST00000238112 RNF207Q6ZRF8 634 aa20.08■□□□□ 0.81
CPSF3-201ENST00000238112 C7orf43Q8WVR3 580 aa20.08■□□□□ 0.81
CPSF3-201ENST00000238112 P3H4Q92791 437 aa20.08■□□□□ 0.81
CPSF3-201ENST00000238112 KIFAP3Q92845 792 aa20.08■□□□□ 0.81
CPSF3-201ENST00000238112 ART4Q93070 314 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms