RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 AIMP1Q12904 312 aaKnown RBP13.88□□□□□ -0.19
MSH2-201ENST00000233146 STK4Q13043 487 aa13.88□□□□□ -0.19
MSH2-201ENST00000233146 LPIN1Q14693 890 aa13.88□□□□□ -0.19
MSH2-201ENST00000233146 SFR1Q86XK3 245 aa13.88□□□□□ -0.19
MSH2-201ENST00000233146 ARMCX3Q9UH62 379 aaPredicted RBP13.88□□□□□ -0.19
MSH2-201ENST00000233146 NUMBLQ9Y6R0 609 aa13.88□□□□□ -0.19
MSH2-201ENST00000233146 LAMB4A4D0S4 1761 aa13.87□□□□□ -0.19
MSH2-201ENST00000233146 GYG2O15488 501 aa13.87□□□□□ -0.19
MSH2-201ENST00000233146 BUD23O43709 281 aaKnown RBP13.87□□□□□ -0.19
MSH2-201ENST00000233146 TFAP2AP05549 437 aa13.87□□□□□ -0.19
MSH2-201ENST00000233146 AMPD1P23109 780 aa13.87□□□□□ -0.19
MSH2-201ENST00000233146 TCF7P36402 384 aaPredicted RBP13.87□□□□□ -0.19
MSH2-201ENST00000233146 PPP1R2P41236 205 aa13.87□□□□□ -0.19
MSH2-201ENST00000233146 WDR4P57081 412 aaKnown RBP13.87□□□□□ -0.19
MSH2-201ENST00000233146 FKBP4Q02790 459 aaKnown RBP eCLIP13.87□□□□□ -0.19
MSH2-201ENST00000233146 PPIDQ08752 370 aaKnown RBP13.87□□□□□ -0.19
MSH2-201ENST00000233146 MAPK7Q13164 816 aa13.87□□□□□ -0.19
MSH2-201ENST00000233146 RGS9BPQ6ZS82 235 aa13.87□□□□□ -0.19
MSH2-201ENST00000233146 PHLDB2Q86SQ0 1253 aa13.87□□□□□ -0.19
MSH2-201ENST00000233146 NT5DC3Q86UY8 548 aa13.87□□□□□ -0.19
MSH2-201ENST00000233146 PDSS2Q86YH6 399 aa13.87□□□□□ -0.19
MSH2-201ENST00000233146 PIP4K2CQ8TBX8 421 aa13.87□□□□□ -0.19
MSH2-201ENST00000233146 SEMA6BQ9H3T3 888 aa13.87□□□□□ -0.19
MSH2-201ENST00000233146 ZSWIM5Q9P217 1185 aa13.87□□□□□ -0.19
MSH2-201ENST00000233146 PARP2Q9UGN5 583 aa13.87□□□□□ -0.19
MSH2-201ENST00000233146 SLC4A4Q9Y6R1 1079 aa13.87□□□□□ -0.19
MSH2-201ENST00000233146 CHD4Q14839 1912 aa13.87□□□□□ -0.19
MSH2-201ENST00000233146 BTBD11A6QL63 1104 aa13.87□□□□□ -0.19
MSH2-201ENST00000233146 C2CD2LO14523 706 aa13.87□□□□□ -0.19
MSH2-201ENST00000233146 STK10O94804 968 aaKnown RBP13.87□□□□□ -0.19
MSH2-201ENST00000233146 GAS8O95995 478 aa13.87□□□□□ -0.19
MSH2-201ENST00000233146 DNAJC3Q13217 504 aa13.87□□□□□ -0.19
MSH2-201ENST00000233146 RRP1BQ14684 758 aaKnown RBP13.87□□□□□ -0.19
MSH2-201ENST00000233146 DEPDC1Q5TB30 811 aa13.87□□□□□ -0.19
MSH2-201ENST00000233146 MCUR1Q96AQ8 359 aa13.87□□□□□ -0.19
MSH2-201ENST00000233146 TUBB6Q9BUF5 446 aa13.87□□□□□ -0.19
MSH2-201ENST00000233146 TPK1Q9H3S4 243 aa13.87□□□□□ -0.19
MSH2-201ENST00000233146 SUGT1Q9Y2Z0 365 aa13.87□□□□□ -0.19
MSH2-201ENST00000233146 NDC80O14777 642 aa13.87□□□□□ -0.19
MSH2-201ENST00000233146 UQCRBP14927 111 aa13.87□□□□□ -0.19
MSH2-201ENST00000233146 PTGIRP43119 386 aa13.87□□□□□ -0.19
MSH2-201ENST00000233146 NAA20P61599 178 aa13.87□□□□□ -0.19
MSH2-201ENST00000233146 PACS1Q6VY07 963 aa13.87□□□□□ -0.19
MSH2-201ENST00000233146 TRMT10CQ7L0Y3 403 aaKnown RBP13.87□□□□□ -0.19
MSH2-201ENST00000233146 MTDHQ86UE4 582 aaKnown RBP13.87□□□□□ -0.19
MSH2-201ENST00000233146 ZFP28Q8NHY6 868 aa13.87□□□□□ -0.19
MSH2-201ENST00000233146 C7orf43Q8WVR3 580 aa13.87□□□□□ -0.19
MSH2-201ENST00000233146 BHMTQ93088 406 aa13.87□□□□□ -0.19
MSH2-201ENST00000233146 ERVK-5Q9HDB9 667 aa13.87□□□□□ -0.19
MSH2-201ENST00000233146 CYLDQ9NQC7 956 aa13.87□□□□□ -0.19
MSH2-201ENST00000233146 DMTF1Q9Y222 760 aa13.87□□□□□ -0.19
MSH2-201ENST00000233146 TBC1D12O60347 775 aa13.86□□□□□ -0.19
MSH2-201ENST00000233146 EDF1O60869 148 aaKnown RBP13.86□□□□□ -0.19
MSH2-201ENST00000233146 ZBED1O96006 694 aa13.86□□□□□ -0.19
MSH2-201ENST00000233146 RAB15P59190 212 aa13.86□□□□□ -0.19
MSH2-201ENST00000233146 ASPHQ12797 758 aa13.86□□□□□ -0.19
MSH2-201ENST00000233146 KRT72Q14CN4 511 aa13.86□□□□□ -0.19
MSH2-201ENST00000233146 HSP90AA5PQ58FG0 334 aa13.86□□□□□ -0.19
MSH2-201ENST00000233146 CENPPQ6IPU0 288 aa13.86□□□□□ -0.19
MSH2-201ENST00000233146 NLRP9Q7RTR0 991 aa13.86□□□□□ -0.19
MSH2-201ENST00000233146 DZIP1Q86YF9 867 aaKnown RBP13.86□□□□□ -0.19
MSH2-201ENST00000233146 OR6Y1Q8NGX8 325 aa13.86□□□□□ -0.19
MSH2-201ENST00000233146 PRPF31Q8WWY3 499 aaKnown RBP13.86□□□□□ -0.19
MSH2-201ENST00000233146 SREK1Q8WXA9 508 aaKnown RBP13.86□□□□□ -0.19
MSH2-201ENST00000233146 HEPHQ9BQS7 1158 aa13.86□□□□□ -0.19
MSH2-201ENST00000233146 GBA3Q9H227 469 aa13.86□□□□□ -0.19
MSH2-201ENST00000233146 SLCO1B3Q9NPD5 702 aa13.86□□□□□ -0.19
MSH2-201ENST00000233146 NDE1Q9NXR1 346 aa13.86□□□□□ -0.19
MSH2-201ENST00000233146 PCDHA3Q9Y5H8 950 aa13.86□□□□□ -0.19
MSH2-201ENST00000233146 ADGRA3Q8IWK6 1321 aa13.86□□□□□ -0.19
MSH2-201ENST00000233146 MUTP22033 750 aa13.86□□□□□ -0.19
MSH2-201ENST00000233146 COPB2P35606 906 aa13.86□□□□□ -0.19
MSH2-201ENST00000233146 TMED10P49755 219 aaKnown RBP13.86□□□□□ -0.19
MSH2-201ENST00000233146 CCT8P50990 548 aa13.86□□□□□ -0.19
MSH2-201ENST00000233146 RAP1GDS1P52306 607 aa13.86□□□□□ -0.19
MSH2-201ENST00000233146 CHN2P52757 468 aa13.86□□□□□ -0.19
MSH2-201ENST00000233146 EXOC3L4Q17RC7 722 aa13.86□□□□□ -0.19
MSH2-201ENST00000233146 UGT2A3Q6UWM9 527 aa13.86□□□□□ -0.19
MSH2-201ENST00000233146 SCYL3Q8IZE3 742 aa13.86□□□□□ -0.19
MSH2-201ENST00000233146 VPS52Q8N1B4 723 aa13.86□□□□□ -0.19
MSH2-201ENST00000233146 CCT7Q99832 543 aa13.86□□□□□ -0.19
MSH2-201ENST00000233146 TRPC7Q9HCX4 862 aa13.86□□□□□ -0.19
MSH2-201ENST00000233146 ARL8BQ9NVJ2 186 aa13.86□□□□□ -0.19
MSH2-201ENST00000233146 HEG1Q9ULI3 1381 aa13.86□□□□□ -0.19
MSH2-201ENST00000233146 PHF2O75151 1096 aa13.85□□□□□ -0.19
MSH2-201ENST00000233146 TRMUO75648 421 aaKnown RBP13.85□□□□□ -0.19
MSH2-201ENST00000233146 SLC5A2P31639 672 aa13.85□□□□□ -0.19
MSH2-201ENST00000233146 KLHL30Q0D2K2 578 aa13.85□□□□□ -0.19
MSH2-201ENST00000233146 COBLL1Q53SF7 1204 aa13.85□□□□□ -0.19
MSH2-201ENST00000233146 ZNF280DQ6N043 979 aa13.85□□□□□ -0.19
MSH2-201ENST00000233146 PEX5LQ8IYB4 626 aa13.85□□□□□ -0.19
MSH2-201ENST00000233146 METTL25Q8N6Q8 603 aa13.85□□□□□ -0.19
MSH2-201ENST00000233146 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.85□□□□□ -0.19
MSH2-201ENST00000233146 RNF26Q9BY78 433 aaPredicted RBP13.85□□□□□ -0.19
MSH2-201ENST00000233146 ASAP1Q9ULH1 1129 aa13.85□□□□□ -0.19
MSH2-201ENST00000233146 TRAF3IP3Q9Y228 551 aa13.85□□□□□ -0.19
MSH2-201ENST00000233146 GPC6Q9Y625 555 aaPredicted RBP13.85□□□□□ -0.19
MSH2-201ENST00000233146 SLIT3O75094 1523 aa13.85□□□□□ -0.19
MSH2-201ENST00000233146 COG7P83436 770 aa13.85□□□□□ -0.19
MSH2-201ENST00000233146 PDE4DQ08499 809 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms