RNA–Protein interactions for RNA: ENST00000226798.8

FRG1-201, Transcript of FSHD region gene 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FRG1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRG1-201ENST00000226798 EMC2Q15006 297 aa12.92□□□□□ -0.34
FRG1-201ENST00000226798 FERMT3Q86UX7 667 aa12.92□□□□□ -0.34
FRG1-201ENST00000226798 EXOC8Q8IYI6 725 aa12.92□□□□□ -0.34
FRG1-201ENST00000226798 TRIM22Q8IYM9 498 aa12.92□□□□□ -0.34
FRG1-201ENST00000226798 FAM177A1Q8N128 213 aaPredicted RBP12.92□□□□□ -0.34
FRG1-201ENST00000226798 SMG7Q92540 1137 aaKnown RBP12.92□□□□□ -0.34
FRG1-201ENST00000226798 MARVELD3Q96A59 401 aa12.92□□□□□ -0.34
FRG1-201ENST00000226798 CCDC51Q96ER9 411 aa12.92□□□□□ -0.34
FRG1-201ENST00000226798 CEP170P1Q96L14 293 aa12.92□□□□□ -0.34
FRG1-201ENST00000226798 DLGAP2Q9P1A6 1054 aa12.92□□□□□ -0.34
FRG1-201ENST00000226798 CA14Q9ULX7 337 aa12.92□□□□□ -0.34
FRG1-201ENST00000226798 ANHXE9PGG2 379 aa12.91□□□□□ -0.34
FRG1-201ENST00000226798 TSPAN1O60635 241 aa12.91□□□□□ -0.34
FRG1-201ENST00000226798 DEXIO95424 95 aa12.91□□□□□ -0.34
FRG1-201ENST00000226798 P4HBP07237 508 aaKnown RBP12.91□□□□□ -0.34
FRG1-201ENST00000226798 ITGA4P13612 1032 aa12.91□□□□□ -0.34
FRG1-201ENST00000226798 OR1G1P47890 313 aa12.91□□□□□ -0.34
FRG1-201ENST00000226798 SCNN1GP51170 649 aa12.91□□□□□ -0.34
FRG1-201ENST00000226798 HTR4Q13639 388 aa12.91□□□□□ -0.34
FRG1-201ENST00000226798 PCBP1Q15365 356 aaKnown RBP eCLIP12.91□□□□□ -0.34
FRG1-201ENST00000226798 INF2Q27J81 1249 aa12.91□□□□□ -0.34
FRG1-201ENST00000226798 GALNT17Q6IS24 598 aa12.91□□□□□ -0.34
FRG1-201ENST00000226798 PHLDB3Q6NSJ2 640 aa12.91□□□□□ -0.34
FRG1-201ENST00000226798 C4orf19Q8IY42 314 aa12.91□□□□□ -0.34
FRG1-201ENST00000226798 GPR65Q8IYL9 337 aa12.91□□□□□ -0.34
FRG1-201ENST00000226798 RNF149Q8NC42 400 aa12.91□□□□□ -0.34
FRG1-201ENST00000226798 GPR152Q8TDT2 470 aa12.91□□□□□ -0.34
FRG1-201ENST00000226798 RMDN1Q96DB5 314 aa12.91□□□□□ -0.34
FRG1-201ENST00000226798 FAM20AQ96MK3 541 aa12.91□□□□□ -0.34
FRG1-201ENST00000226798 ZFP42Q96MM3 310 aa12.91□□□□□ -0.34
FRG1-201ENST00000226798 GAD1Q99259 594 aa12.91□□□□□ -0.34
FRG1-201ENST00000226798 LXNQ9BS40 222 aa12.91□□□□□ -0.34
FRG1-201ENST00000226798 EIF2AQ9BY44 585 aaKnown RBP12.91□□□□□ -0.34
FRG1-201ENST00000226798 PLEKHA4Q9H4M7 779 aa12.91□□□□□ -0.34
FRG1-201ENST00000226798 ARHGEF3Q9NR81 526 aa12.91□□□□□ -0.34
FRG1-201ENST00000226798 ZDHHC7Q9NXF8 308 aa12.91□□□□□ -0.34
FRG1-201ENST00000226798 R4GN57 208 aa12.91□□□□□ -0.34
FRG1-201ENST00000226798 SPTBN2O15020 2390 aa12.91□□□□□ -0.34
FRG1-201ENST00000226798 TPRP12270 2363 aaKnown RBP12.91□□□□□ -0.34
FRG1-201ENST00000226798 ACACBO00763 2458 aa12.9□□□□□ -0.34
FRG1-201ENST00000226798 CACNA1BQ00975 2339 aa12.9□□□□□ -0.34
FRG1-201ENST00000226798 COL4A3Q01955 1670 aa12.9□□□□□ -0.34
FRG1-201ENST00000226798 ASAP2O43150 1006 aa12.9□□□□□ -0.34
FRG1-201ENST00000226798 TGM5O43548 720 aa12.9□□□□□ -0.34
FRG1-201ENST00000226798 ERLIN2O94905 339 aa12.9□□□□□ -0.34
FRG1-201ENST00000226798 SPATA31D3P0C874 917 aa12.9□□□□□ -0.34
FRG1-201ENST00000226798 MYBP10242 640 aa12.9□□□□□ -0.34
FRG1-201ENST00000226798 LAMP2P13473 410 aa12.9□□□□□ -0.34
FRG1-201ENST00000226798 AXLP30530 894 aa12.9□□□□□ -0.34
FRG1-201ENST00000226798 YWHABP31946 246 aaKnown RBP12.9□□□□□ -0.34
FRG1-201ENST00000226798 PTENP60484 403 aa12.9□□□□□ -0.34
FRG1-201ENST00000226798 SSRP1Q08945 709 aaKnown RBP12.9□□□□□ -0.34
FRG1-201ENST00000226798 TOB2Q14106 344 aaPredicted RBP12.9□□□□□ -0.34
FRG1-201ENST00000226798 PPP4R3AQ6IN85 833 aa12.9□□□□□ -0.34
FRG1-201ENST00000226798 NOTUMQ6P988 496 aa12.9□□□□□ -0.34
FRG1-201ENST00000226798 LILRA6Q6PI73 481 aa12.9□□□□□ -0.34
FRG1-201ENST00000226798 SPATA31D4Q6ZUB0 917 aa12.9□□□□□ -0.34
FRG1-201ENST00000226798 KRT25Q7Z3Z0 450 aa12.9□□□□□ -0.34
FRG1-201ENST00000226798 IFNLR1Q8IU57 520 aaPredicted RBP12.9□□□□□ -0.34
FRG1-201ENST00000226798 GSTCDQ8NEC7 633 aa12.9□□□□□ -0.34
FRG1-201ENST00000226798 TCP11Q8WWU5 503 aa12.9□□□□□ -0.34
FRG1-201ENST00000226798 RIN2Q8WYP3 895 aaPredicted RBP12.9□□□□□ -0.34
FRG1-201ENST00000226798 B3GALT6Q96L58 329 aa12.9□□□□□ -0.34
FRG1-201ENST00000226798 AIFM3Q96NN9 605 aa12.9□□□□□ -0.34
FRG1-201ENST00000226798 NT5C3AQ9H0P0 336 aa12.9□□□□□ -0.34
FRG1-201ENST00000226798 SLC2A4RGQ9NR83 387 aa12.9□□□□□ -0.34
FRG1-201ENST00000226798 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.9□□□□□ -0.34
FRG1-201ENST00000226798 MIOSQ9NXC5 875 aa12.9□□□□□ -0.34
FRG1-201ENST00000226798 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.9□□□□□ -0.34
FRG1-201ENST00000226798 FNIP2Q9P278 1114 aa12.9□□□□□ -0.34
FRG1-201ENST00000226798 HES2Q9Y543 173 aa12.9□□□□□ -0.34
FRG1-201ENST00000226798 ZMYM2Q9UBW7 1377 aa12.9□□□□□ -0.34
FRG1-201ENST00000226798 VWA8A3KMH1 1905 aa12.9□□□□□ -0.35
FRG1-201ENST00000226798 STK25O00506 426 aa12.89□□□□□ -0.35
FRG1-201ENST00000226798 DCNP07585 359 aaKnown RBP12.89□□□□□ -0.35
FRG1-201ENST00000226798 GCFC2P16383 781 aaKnown RBP12.89□□□□□ -0.35
FRG1-201ENST00000226798 RFX1P22670 979 aa12.89□□□□□ -0.35
FRG1-201ENST00000226798 PSMA5P28066 241 aa12.89□□□□□ -0.35
FRG1-201ENST00000226798 MBTD1Q05BQ5 628 aa12.89□□□□□ -0.35
FRG1-201ENST00000226798 SPIRE1Q08AE8 756 aa12.89□□□□□ -0.35
FRG1-201ENST00000226798 EPHA7Q15375 998 aa12.89□□□□□ -0.35
FRG1-201ENST00000226798 AMHR2Q16671 573 aa12.89□□□□□ -0.35
FRG1-201ENST00000226798 FUT10Q6P4F1 479 aa12.89□□□□□ -0.35
FRG1-201ENST00000226798 GET4Q7L5D6 327 aaPredicted RBP12.89□□□□□ -0.35
FRG1-201ENST00000226798 SPNS2Q8IVW8 549 aa12.89□□□□□ -0.35
FRG1-201ENST00000226798 KCNG4Q8TDN1 519 aa12.89□□□□□ -0.35
FRG1-201ENST00000226798 HAS1Q92839 578 aa12.89□□□□□ -0.35
FRG1-201ENST00000226798 CPB2Q96IY4 423 aa12.89□□□□□ -0.35
FRG1-201ENST00000226798 GPR62Q9BZJ7 368 aa12.89□□□□□ -0.35
FRG1-201ENST00000226798 PRKD2Q9BZL6 878 aa12.89□□□□□ -0.35
FRG1-201ENST00000226798 CSRNP2Q9H175 543 aa12.89□□□□□ -0.35
FRG1-201ENST00000226798 NXF3Q9H4D5 531 aaKnown RBP12.89□□□□□ -0.35
FRG1-201ENST00000226798 XPNPEP1Q9NQW7 623 aa12.89□□□□□ -0.35
FRG1-201ENST00000226798 RGL1Q9NZL6 768 aa12.89□□□□□ -0.35
FRG1-201ENST00000226798 GIT1Q9Y2X7 761 aa12.89□□□□□ -0.35
FRG1-201ENST00000226798 NUMBLQ9Y6R0 609 aa12.89□□□□□ -0.35
FRG1-201ENST00000226798 CHD8Q9HCK8 2581 aa12.89□□□□□ -0.35
FRG1-201ENST00000226798 NOTCH4Q99466 2003 aa12.89□□□□□ -0.35
FRG1-201ENST00000226798 CFAP47Q6ZTR5 3102 aa12.88□□□□□ -0.35
FRG1-201ENST00000226798 ZBTB39O15060 712 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms