RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 VSTM1Q6UX27 236 aa10.37□□□□□ -0.75
TUBB1-201ENST00000217133 SLC13A5Q86YT5 568 aaPredicted RBP10.37□□□□□ -0.75
TUBB1-201ENST00000217133 ERP27Q96DN0 273 aa10.37□□□□□ -0.75
TUBB1-201ENST00000217133 TSC22D3Q99576 134 aa10.37□□□□□ -0.75
TUBB1-201ENST00000217133 IKZF4Q9H2S9 585 aa10.37□□□□□ -0.75
TUBB1-201ENST00000217133 APEX2Q9UBZ4 518 aa10.37□□□□□ -0.75
TUBB1-201ENST00000217133 TCRBV7S2A1N4TA0A589 114 aa10.36□□□□□ -0.75
TUBB1-201ENST00000217133 FOXN3O00409 490 aaPredicted RBP10.36□□□□□ -0.75
TUBB1-201ENST00000217133 ZBTB5O15062 677 aa10.36□□□□□ -0.75
TUBB1-201ENST00000217133 BCRP11274 1271 aa10.36□□□□□ -0.75
TUBB1-201ENST00000217133 CTNNA2P26232 953 aa10.36□□□□□ -0.75
TUBB1-201ENST00000217133 ALDH3A1P30838 453 aa10.36□□□□□ -0.75
TUBB1-201ENST00000217133 IL9RQ01113 521 aa10.36□□□□□ -0.75
TUBB1-201ENST00000217133 ZNF543Q08ER8 600 aa10.36□□□□□ -0.75
TUBB1-201ENST00000217133 TNIP1Q15025 636 aa10.36□□□□□ -0.75
TUBB1-201ENST00000217133 TRIP13Q15645 432 aaPredicted RBP10.36□□□□□ -0.75
TUBB1-201ENST00000217133 SGO2Q562F6 1265 aa10.36□□□□□ -0.75
TUBB1-201ENST00000217133 RNF207Q6ZRF8 634 aa10.36□□□□□ -0.75
TUBB1-201ENST00000217133 CCDC125Q86Z20 511 aa10.36□□□□□ -0.75
TUBB1-201ENST00000217133 TEX9Q8N6V9 391 aa10.36□□□□□ -0.75
TUBB1-201ENST00000217133 SLC20A1Q8WUM9 679 aa10.36□□□□□ -0.75
TUBB1-201ENST00000217133 NUDCD1Q96RS6 583 aa10.36□□□□□ -0.75
TUBB1-201ENST00000217133 POP1Q99575 1024 aaKnown RBP10.36□□□□□ -0.75
TUBB1-201ENST00000217133 RUSC1Q9BVN2 902 aa10.36□□□□□ -0.75
TUBB1-201ENST00000217133 SNED1Q8TER0 1413 aa10.36□□□□□ -0.75
TUBB1-201ENST00000217133 RIMBP2O15034 1052 aa10.36□□□□□ -0.75
TUBB1-201ENST00000217133 PPP1R11O60927 126 aaPredicted RBP10.36□□□□□ -0.75
TUBB1-201ENST00000217133 NMT1P30419 496 aaKnown RBP10.36□□□□□ -0.75
TUBB1-201ENST00000217133 KRT17Q04695 432 aa10.36□□□□□ -0.75
TUBB1-201ENST00000217133 GRIPAP1Q4V328 841 aa10.36□□□□□ -0.75
TUBB1-201ENST00000217133 C11orf63Q6NUN7 778 aa10.36□□□□□ -0.75
TUBB1-201ENST00000217133 ZNF449Q6P9G9 518 aa10.36□□□□□ -0.75
TUBB1-201ENST00000217133 SLC30A9Q6PML9 568 aa10.36□□□□□ -0.75
TUBB1-201ENST00000217133 PPP1R21Q6ZMI0 780 aa10.36□□□□□ -0.75
TUBB1-201ENST00000217133 SEPT14Q6ZU15 432 aa10.36□□□□□ -0.75
TUBB1-201ENST00000217133 MIGA2Q7L4E1 593 aa10.36□□□□□ -0.75
TUBB1-201ENST00000217133 EPM2AIP1Q7L775 607 aaPredicted RBP10.36□□□□□ -0.75
TUBB1-201ENST00000217133 C1orf54Q8WWF1 131 aa10.36□□□□□ -0.75
TUBB1-201ENST00000217133 GRAMD1AQ96CP6 724 aa10.36□□□□□ -0.75
TUBB1-201ENST00000217133 PLVAPQ9BX97 442 aa10.36□□□□□ -0.75
TUBB1-201ENST00000217133 RTFDC1Q9BY42 306 aaPredicted RBP10.36□□□□□ -0.75
TUBB1-201ENST00000217133 BCAS3Q9H6U6 928 aa10.36□□□□□ -0.75
TUBB1-201ENST00000217133 UBE2TQ9NPD8 197 aaPredicted RBP10.36□□□□□ -0.75
TUBB1-201ENST00000217133 RABGAP1Q9Y3P9 1069 aa10.36□□□□□ -0.75
TUBB1-201ENST00000217133 EXOC3O60645 756 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 DLATP10515 647 aaKnown RBP10.35□□□□□ -0.75
TUBB1-201ENST00000217133 TARSP26639 723 aaKnown RBP10.35□□□□□ -0.75
TUBB1-201ENST00000217133 ZNF76P36508 570 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 ABL2P42684 1182 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 GRAPQ13588 217 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 ZC2HC1CQ53FD0 456 aaPredicted RBP10.35□□□□□ -0.75
TUBB1-201ENST00000217133 ASRGL1Q7L266 308 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 ECHDC2Q86YB7 292 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 SYCP3Q8IZU3 236 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 GRAPLQ8TC17 118 aaPredicted RBP10.35□□□□□ -0.75
TUBB1-201ENST00000217133 PIGOQ8TEQ8 1089 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 MAGEB18Q96M61 343 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 ANKRD27Q96NW4 1050 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 WNT8AQ9H1J5 351 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 RNPEPL1Q9HAU8 725 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 BCS1LQ9Y276 419 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 PCDHA1Q9Y5I3 950 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 ATMINO43313 823 aaPredicted RBP10.35□□□□□ -0.75
TUBB1-201ENST00000217133 SLC26A4O43511 780 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 ATP5HO75947 161 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 AKR1B1P15121 316 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 ATP4AP20648 1035 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 CALB2P22676 271 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 RPA1P27694 616 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 SKIV2L2P42285 1042 aaKnown RBP10.35□□□□□ -0.75
TUBB1-201ENST00000217133 CLK2P49760 499 aaKnown RBP10.35□□□□□ -0.75
TUBB1-201ENST00000217133 CETN1Q12798 172 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 CCDC6Q16204 474 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 C11orf91Q3C1V1 193 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 CBWD6Q4V339 395 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 TNFAIP8L3Q5GJ75 292 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 CBWD3Q5JTY5 395 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 CBWD5Q5RIA9 395 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 RNF43Q68DV7 783 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 KSR1Q8IVT5 923 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 RPUSD2Q8IZ73 545 aaKnown RBP10.35□□□□□ -0.75
TUBB1-201ENST00000217133 ZDHHC14Q8IZN3 488 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 AGGF1Q8N302 714 aaeCLIP10.35□□□□□ -0.75
TUBB1-201ENST00000217133 TMEM237Q96Q45 408 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 LRRC37BQ96QE4 947 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 GLT8D2Q9H1C3 349 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 HAO1Q9UJM8 370 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 LAMB1P07942 1786 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 C6orf229H3BNL8 230 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 CLDN3O15551 220 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 WFS1O76024 890 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 TTC4O95801 387 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 LINGO3P0C6S8 592 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 GAP43P17677 238 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 ADCY8P40145 1251 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 RWDD2BP57060 319 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 MTFR1Q15390 333 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 MUM1Q2TAK8 710 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 CRY2Q49AN0 593 aa10.35□□□□□ -0.75
TUBB1-201ENST00000217133 ANKRD35Q8N283 1001 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms