RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 HDAC7Q8WUI4 952 aa17.6■□□□□ 0.41
ERCC1-201ENST00000013807 POLR3FQ9H1D9 316 aaPredicted RBP17.6■□□□□ 0.41
ERCC1-201ENST00000013807 NXF3Q9H4D5 531 aaKnown RBP17.6■□□□□ 0.41
ERCC1-201ENST00000013807 PRMT7Q9NVM4 692 aaPredicted RBP17.6■□□□□ 0.41
ERCC1-201ENST00000013807 DPP7Q9UHL4 492 aa17.6■□□□□ 0.41
ERCC1-201ENST00000013807 B4GALT5O43286 388 aa17.59■□□□□ 0.41
ERCC1-201ENST00000013807 NR1I2O75469 434 aa17.59■□□□□ 0.41
ERCC1-201ENST00000013807 BRD1O95696 1058 aa17.59■□□□□ 0.41
ERCC1-201ENST00000013807 ADH1AP07327 375 aa17.59■□□□□ 0.41
ERCC1-201ENST00000013807 AVPR2P30518 371 aa17.59■□□□□ 0.41
ERCC1-201ENST00000013807 OR1G1P47890 313 aa17.59■□□□□ 0.41
ERCC1-201ENST00000013807 TRAPPC10P48553 1259 aa17.59■□□□□ 0.41
ERCC1-201ENST00000013807 MRE11P49959 708 aa17.59■□□□□ 0.41
ERCC1-201ENST00000013807 SCNN1GP51170 649 aa17.59■□□□□ 0.41
ERCC1-201ENST00000013807 PTPN5P54829 565 aa17.59■□□□□ 0.41
ERCC1-201ENST00000013807 TAS1R1Q7RTX1 841 aa17.59■□□□□ 0.41
ERCC1-201ENST00000013807 TDRD5Q8NAT2 981 aaKnown RBP17.59■□□□□ 0.41
ERCC1-201ENST00000013807 C8orf76Q96K31 380 aa17.59■□□□□ 0.41
ERCC1-201ENST00000013807 CCDC43Q96MW1 224 aaKnown RBP17.59■□□□□ 0.41
ERCC1-201ENST00000013807 COLEC11Q9BWP8 271 aa17.59■□□□□ 0.41
ERCC1-201ENST00000013807 TRIM6Q9C030 488 aaPredicted RBP17.59■□□□□ 0.41
ERCC1-201ENST00000013807 TSHZ2Q9NRE2 1034 aa17.59■□□□□ 0.41
ERCC1-201ENST00000013807 USP34Q70CQ2 3546 aa17.59■□□□□ 0.41
ERCC1-201ENST00000013807 VWA8A3KMH1 1905 aa17.59■□□□□ 0.41
ERCC1-201ENST00000013807 A0A087WWV3 80 aa17.58■□□□□ 0.4
ERCC1-201ENST00000013807 TEX28O15482 410 aa17.58■□□□□ 0.4
ERCC1-201ENST00000013807 USO1O60763 962 aaKnown RBP17.58■□□□□ 0.4
ERCC1-201ENST00000013807 URODP06132 367 aa17.58■□□□□ 0.4
ERCC1-201ENST00000013807 WEE2P0C1S8 567 aa17.58■□□□□ 0.4
ERCC1-201ENST00000013807 OR52Z1P0C646 297 aa17.58■□□□□ 0.4
ERCC1-201ENST00000013807 CYP11B2P19099 503 aa17.58■□□□□ 0.4
ERCC1-201ENST00000013807 ATP2B1P20020 1258 aa17.58■□□□□ 0.4
ERCC1-201ENST00000013807 SP100P23497 879 aaPredicted RBP17.58■□□□□ 0.4
ERCC1-201ENST00000013807 GLUD2P49448 558 aa17.58■□□□□ 0.4
ERCC1-201ENST00000013807 HMGN5P82970 282 aaKnown RBP17.58■□□□□ 0.4
ERCC1-201ENST00000013807 TCF15Q12870 199 aa17.58■□□□□ 0.4
ERCC1-201ENST00000013807 GRIK3Q13003 919 aa17.58■□□□□ 0.4
ERCC1-201ENST00000013807 TMC5Q6UXY8 1006 aa17.58■□□□□ 0.4
ERCC1-201ENST00000013807 C4orf32Q8N8J7 132 aa17.58■□□□□ 0.4
ERCC1-201ENST00000013807 ERMNQ8TAM6 284 aa17.58■□□□□ 0.4
ERCC1-201ENST00000013807 ZSCAN31Q96LW9 406 aaPredicted RBP17.58■□□□□ 0.4
ERCC1-201ENST00000013807 GPRC5CQ9NQ84 441 aa17.58■□□□□ 0.4
ERCC1-201ENST00000013807 FNIP2Q9P278 1114 aa17.58■□□□□ 0.4
ERCC1-201ENST00000013807 PRG3Q9Y2Y8 225 aaPredicted RBP17.58■□□□□ 0.4
ERCC1-201ENST00000013807 MYH11P35749 1972 aa17.57■□□□□ 0.4
ERCC1-201ENST00000013807 SSBP05455 408 aaKnown RBP eCLIP17.57■□□□□ 0.4
ERCC1-201ENST00000013807 AKAP5P24588 427 aa17.57■□□□□ 0.4
ERCC1-201ENST00000013807 RBM25P49756 843 aaKnown RBP17.57■□□□□ 0.4
ERCC1-201ENST00000013807 FXR2P51116 673 aaKnown RBP eCLIP17.57■□□□□ 0.4
ERCC1-201ENST00000013807 PDIA5Q14554 519 aa17.57■□□□□ 0.4
ERCC1-201ENST00000013807 LILRA6Q6PI73 481 aa17.57■□□□□ 0.4
ERCC1-201ENST00000013807 OTOP3Q7RTS5 596 aa17.57■□□□□ 0.4
ERCC1-201ENST00000013807 ZBTB33Q86T24 672 aa17.57■□□□□ 0.4
ERCC1-201ENST00000013807 FEZF2Q8TBJ5 459 aa17.57■□□□□ 0.4
ERCC1-201ENST00000013807 ACSF2Q96CM8 615 aaPredicted RBP17.57■□□□□ 0.4
ERCC1-201ENST00000013807 KIF2CQ99661 725 aa17.57■□□□□ 0.4
ERCC1-201ENST00000013807 C2orf40Q9H1Z8 148 aa17.57■□□□□ 0.4
ERCC1-201ENST00000013807 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.57■□□□□ 0.4
ERCC1-201ENST00000013807 LIMD1Q9UGP4 676 aa17.57■□□□□ 0.4
ERCC1-201ENST00000013807 ADAM28Q9UKQ2 775 aa17.57■□□□□ 0.4
ERCC1-201ENST00000013807 CITO14578 2027 aa17.56■□□□□ 0.4
ERCC1-201ENST00000013807 LRRIQ4A6NIV6 560 aa17.56■□□□□ 0.4
ERCC1-201ENST00000013807 ACKR2O00590 384 aa17.56■□□□□ 0.4
ERCC1-201ENST00000013807 NPTXRO95502 500 aa17.56■□□□□ 0.4
ERCC1-201ENST00000013807 U2AF2P26368 475 aaKnown RBP eCLIP17.56■□□□□ 0.4
ERCC1-201ENST00000013807 NAMPTP43490 491 aa17.56■□□□□ 0.4
ERCC1-201ENST00000013807 VCPP55072 806 aaKnown RBP17.56■□□□□ 0.4
ERCC1-201ENST00000013807 GUCY1B3Q02153 619 aa17.56■□□□□ 0.4
ERCC1-201ENST00000013807 ZNF174Q15697 407 aa17.56■□□□□ 0.4
ERCC1-201ENST00000013807 ELMSAN1Q6PJG2 1045 aa17.56■□□□□ 0.4
ERCC1-201ENST00000013807 POTEGQ6S5H5 508 aa17.56■□□□□ 0.4
ERCC1-201ENST00000013807 PADI6Q6TGC4 694 aa17.56■□□□□ 0.4
ERCC1-201ENST00000013807 CCDC149Q6ZUS6 474 aa17.56■□□□□ 0.4
ERCC1-201ENST00000013807 NOSTRINQ8IVI9 506 aa17.56■□□□□ 0.4
ERCC1-201ENST00000013807 CCDC83Q8IWF9 413 aa17.56■□□□□ 0.4
ERCC1-201ENST00000013807 ZBTB8OSQ8IWT0 167 aa17.56■□□□□ 0.4
ERCC1-201ENST00000013807 GPR62Q9BZJ7 368 aa17.56■□□□□ 0.4
ERCC1-201ENST00000013807 CCDC113Q9H0I3 377 aa17.56■□□□□ 0.4
ERCC1-201ENST00000013807 IRF2BPLQ9H1B7 796 aa17.56■□□□□ 0.4
ERCC1-201ENST00000013807 PLEKHA4Q9H4M7 779 aa17.56■□□□□ 0.4
ERCC1-201ENST00000013807 SH2B1Q9NRF2 756 aaPredicted RBP17.56■□□□□ 0.4
ERCC1-201ENST00000013807 F8W810 466 aa17.55■□□□□ 0.4
ERCC1-201ENST00000013807 N4BP3O15049 544 aa17.55■□□□□ 0.4
ERCC1-201ENST00000013807 GLUD1P00367 558 aa17.55■□□□□ 0.4
ERCC1-201ENST00000013807 FOSBP53539 338 aa17.55■□□□□ 0.4
ERCC1-201ENST00000013807 TUSC3Q13454 348 aa17.55■□□□□ 0.4
ERCC1-201ENST00000013807 USP41Q3LFD5 358 aa17.55■□□□□ 0.4
ERCC1-201ENST00000013807 TTC38Q5R3I4 469 aa17.55■□□□□ 0.4
ERCC1-201ENST00000013807 HAUS3Q68CZ6 603 aa17.55■□□□□ 0.4
ERCC1-201ENST00000013807 FUT10Q6P4F1 479 aa17.55■□□□□ 0.4
ERCC1-201ENST00000013807 CDR2LQ86X02 465 aaPredicted RBP17.55■□□□□ 0.4
ERCC1-201ENST00000013807 PDZD7Q9H5P4 517 aa17.55■□□□□ 0.4
ERCC1-201ENST00000013807 WDR6Q9NNW5 1121 aaKnown RBP17.55■□□□□ 0.4
ERCC1-201ENST00000013807 MAN1C1Q9NR34 630 aa17.55■□□□□ 0.4
ERCC1-201ENST00000013807 STK24Q9Y6E0 443 aa17.55■□□□□ 0.4
ERCC1-201ENST00000013807 ZFHX2Q9C0A1 2572 aaPredicted RBP17.54■□□□□ 0.4
ERCC1-201ENST00000013807 RIF1Q5UIP0 2472 aaKnown RBP17.54■□□□□ 0.4
ERCC1-201ENST00000013807 CCDC195A0A1B0GUA6 201 aa17.54■□□□□ 0.4
ERCC1-201ENST00000013807 TTLL13PA6NNM8 815 aa17.54■□□□□ 0.4
ERCC1-201ENST00000013807 C2CD2LO14523 706 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms