RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 ALAS1P13196 640 aa15.07■□□□□ 0
USH1C-201ENST00000005226 RARGP13631 454 aa15.07■□□□□ 0
USH1C-201ENST00000005226 VAMP7P51809 220 aa15.07■□□□□ 0
USH1C-201ENST00000005226 PRELPP51888 382 aa15.07■□□□□ 0
USH1C-201ENST00000005226 PPP2R5AQ15172 486 aa15.07■□□□□ 0
USH1C-201ENST00000005226 SLC15A2Q16348 729 aa15.07■□□□□ 0
USH1C-201ENST00000005226 LLGL2Q6P1M3 1020 aa15.07■□□□□ 0
USH1C-201ENST00000005226 PPM1KQ8N3J5 372 aa15.07■□□□□ 0
USH1C-201ENST00000005226 VEZTQ9HBM0 779 aa15.07■□□□□ 0
USH1C-201ENST00000005226 TUFT1Q9NNX1 390 aa15.07■□□□□ 0
USH1C-201ENST00000005226 ZNF219Q9P2Y4 722 aaPredicted RBP15.07■□□□□ 0
USH1C-201ENST00000005226 PI4KBQ9UBF8 816 aa15.07■□□□□ 0
USH1C-201ENST00000005226 CNOT7Q9UIV1 285 aaKnown RBP15.07■□□□□ 0
USH1C-201ENST00000005226 BTAF1O14981 1849 aa15.06■□□□□ 0
USH1C-201ENST00000005226 ARHGEF35A5YM69 484 aa15.06■□□□□ 0
USH1C-201ENST00000005226 MIF4GDA9UHW6 222 aaKnown RBP15.06■□□□□ 0
USH1C-201ENST00000005226 TP73O15350 636 aa15.06■□□□□ 0
USH1C-201ENST00000005226 SNX3O60493 162 aa15.06■□□□□ 0
USH1C-201ENST00000005226 HOXA10P31260 410 aaPredicted RBP15.06■□□□□ 0
USH1C-201ENST00000005226 MAP2K1Q02750 393 aaPredicted RBP15.06■□□□□ 0
USH1C-201ENST00000005226 MYO1EQ12965 1108 aa15.06■□□□□ 0
USH1C-201ENST00000005226 ITIH4Q14624 930 aa15.06■□□□□ 0
USH1C-201ENST00000005226 ZYXQ15942 572 aaKnown RBP15.06■□□□□ 0
USH1C-201ENST00000005226 KYNUQ16719 465 aa15.06■□□□□ 0
USH1C-201ENST00000005226 NUGGCQ68CJ6 796 aa15.06■□□□□ 0
USH1C-201ENST00000005226 C11orf63Q6NUN7 778 aa15.06■□□□□ 0
USH1C-201ENST00000005226 RNF207Q6ZRF8 634 aa15.06■□□□□ 0
USH1C-201ENST00000005226 PRUNE1Q86TP1 453 aa15.06■□□□□ 0
USH1C-201ENST00000005226 SP8Q8IXZ3 490 aa15.06■□□□□ 0
USH1C-201ENST00000005226 KREMEN1Q96MU8 473 aa15.06■□□□□ 0
USH1C-201ENST00000005226 LXNQ9BS40 222 aa15.06■□□□□ 0
USH1C-201ENST00000005226 HERPUD2Q9BSE4 406 aa15.06■□□□□ 0
USH1C-201ENST00000005226 CYP3A4P08684 503 aa15.06■□□□□ 0
USH1C-201ENST00000005226 CDC25CP30307 473 aa15.06■□□□□ 0
USH1C-201ENST00000005226 MMP14P50281 582 aa15.06■□□□□ 0
USH1C-201ENST00000005226 HHIPL2Q6UWX4 724 aa15.06■□□□□ 0
USH1C-201ENST00000005226 CCDC50Q8IVM0 306 aa15.06■□□□□ 0
USH1C-201ENST00000005226 CYP4X1Q8N118 509 aa15.06■□□□□ 0
USH1C-201ENST00000005226 ZNF564Q8TBZ8 553 aaPredicted RBP15.06■□□□□ 0
USH1C-201ENST00000005226 DHX38Q92620 1227 aaKnown RBP15.06■□□□□ 0
USH1C-201ENST00000005226 CCDC127Q96BQ5 260 aa15.06■□□□□ 0
USH1C-201ENST00000005226 NACC1Q96RE7 527 aa15.06■□□□□ 0
USH1C-201ENST00000005226 ZNF577Q9BSK1 485 aa15.06■□□□□ 0
USH1C-201ENST00000005226 ECT2Q9H8V3 914 aa15.06■□□□□ 0
USH1C-201ENST00000005226 CHST7Q9NS84 486 aa15.06■□□□□ 0
USH1C-201ENST00000005226 STK38LQ9Y2H1 464 aa15.06■□□□□ 0
USH1C-201ENST00000005226 RTN2O75298 545 aa15.05■□□□□ 0
USH1C-201ENST00000005226 ZNF131P52739 623 aa15.05■□□□□ 0
USH1C-201ENST00000005226 CLNS1AP54105 237 aaKnown RBP15.05■□□□□ 0
USH1C-201ENST00000005226 VSTM1Q6UX27 236 aa15.05■□□□□ 0
USH1C-201ENST00000005226 ACER1Q8TDN7 264 aa15.05■□□□□ 0
USH1C-201ENST00000005226 EPS8L1Q8TE68 723 aa15.05■□□□□ 0
USH1C-201ENST00000005226 P3H4Q92791 437 aa15.05■□□□□ 0
USH1C-201ENST00000005226 SEMA4DQ92854 862 aa15.05■□□□□ 0
USH1C-201ENST00000005226 CD101Q93033 1021 aa15.05■□□□□ 0
USH1C-201ENST00000005226 ZNF653Q96CK0 615 aa15.05■□□□□ 0
USH1C-201ENST00000005226 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.05■□□□□ 0
USH1C-201ENST00000005226 ASIC3Q9UHC3 531 aa15.05■□□□□ 0
USH1C-201ENST00000005226 MYH11P35749 1972 aa15.05■□□□□ 0
USH1C-201ENST00000005226 IGF2BP3O00425 579 aaKnown RBP eCLIP15.05■□□□□ -0
USH1C-201ENST00000005226 GBP2P32456 591 aaPredicted RBP15.05■□□□□ -0
USH1C-201ENST00000005226 NCALDP61601 193 aa15.05■□□□□ -0
USH1C-201ENST00000005226 KRT17Q04695 432 aa15.05■□□□□ -0
USH1C-201ENST00000005226 SLC5A5Q92911 643 aa15.05■□□□□ -0
USH1C-201ENST00000005226 NOCTQ9UK39 431 aaKnown RBP15.05■□□□□ -0
USH1C-201ENST00000005226 ALDH5A1P51649 535 aaPredicted RBP15.04■□□□□ -0
USH1C-201ENST00000005226 CALCOCO2Q13137 446 aa15.04■□□□□ -0
USH1C-201ENST00000005226 SLMAPQ14BN4 828 aa15.04■□□□□ -0
USH1C-201ENST00000005226 NFIL3Q16649 462 aa15.04■□□□□ -0
USH1C-201ENST00000005226 TNFAIP8L3Q5GJ75 292 aa15.04■□□□□ -0
USH1C-201ENST00000005226 TLDC1Q6P9B6 456 aa15.04■□□□□ -0
USH1C-201ENST00000005226 PADI6Q6TGC4 694 aa15.04■□□□□ -0
USH1C-201ENST00000005226 TMEM179Q6ZVK1 233 aa15.04■□□□□ -0
USH1C-201ENST00000005226 MIGA2Q7L4E1 593 aa15.04■□□□□ -0
USH1C-201ENST00000005226 AGAP11Q8TF27 550 aa15.04■□□□□ -0
USH1C-201ENST00000005226 TMEM117Q9H0C3 514 aa15.04■□□□□ -0
USH1C-201ENST00000005226 TDRD3Q9H7E2 651 aaKnown RBP15.04■□□□□ -0
USH1C-201ENST00000005226 GPRC5CQ9NQ84 441 aa15.04■□□□□ -0
USH1C-201ENST00000005226 MTUS1Q9ULD2 1270 aa15.04■□□□□ -0
USH1C-201ENST00000005226 PASKQ96RG2 1323 aa15.04■□□□□ -0
USH1C-201ENST00000005226 C21orf2O43822 256 aa15.04■□□□□ -0
USH1C-201ENST00000005226 ECEL1O95672 775 aa15.04■□□□□ -0
USH1C-201ENST00000005226 CETPP11597 493 aa15.04■□□□□ -0
USH1C-201ENST00000005226 FMO1Q01740 532 aa15.04■□□□□ -0
USH1C-201ENST00000005226 PPP2R5CQ13362 524 aa15.04■□□□□ -0
USH1C-201ENST00000005226 RPS6KC1Q96S38 1066 aa15.04■□□□□ -0
USH1C-201ENST00000005226 HEMGNQ9BXL5 484 aa15.04■□□□□ -0
USH1C-201ENST00000005226 TOPORSQ9NS56 1045 aaPredicted RBP15.04■□□□□ -0
USH1C-201ENST00000005226 USP15Q9Y4E8 981 aaPredicted RBP15.04■□□□□ -0
USH1C-201ENST00000005226 AFF2P51816 1311 aa15.04■□□□□ -0
USH1C-201ENST00000005226 TATDN1Q6P1N9 297 aa15.03■□□□□ -0
USH1C-201ENST00000005226 STXBP4Q6ZWJ1 553 aa15.03■□□□□ -0
USH1C-201ENST00000005226 NSMCE1Q8WV22 266 aa15.03■□□□□ -0
USH1C-201ENST00000005226 SAAL1Q96ER3 474 aa15.03■□□□□ -0
USH1C-201ENST00000005226 GMCL1Q96IK5 515 aa15.03■□□□□ -0
USH1C-201ENST00000005226 WNT8AQ9H1J5 351 aa15.03■□□□□ -0
USH1C-201ENST00000005226 PARP2Q9UGN5 583 aa15.03■□□□□ -0
USH1C-201ENST00000005226 SUGT1Q9Y2Z0 365 aa15.03■□□□□ -0
USH1C-201ENST00000005226 STK24Q9Y6E0 443 aa15.03■□□□□ -0
USH1C-201ENST00000005226 ZNF831Q5JPB2 1677 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms