RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 SftpdP50404 374 aa16.42■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Ext2P70428 718 aa16.42■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Tmem232Q5K6N0 675 aa16.42■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Fhod1Q6P9Q4 1197 aa16.42■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 NemfQ8CCP0 1064 aaKnown RBP16.42■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Mrpl4Q9DCU6 294 aaKnown RBP16.42■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 CpdO89001 1377 aa16.42■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Nmt1O70310 496 aaKnown RBP16.42■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 HelqQ2VPA6 1069 aa16.42■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Prkaa1Q5EG47 559 aa16.42■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Cfap52Q5F201 620 aa16.42■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Scfd2Q8BTY8 684 aa16.42■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Usp38Q8BW70 1042 aa16.42■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Actl9Q8CG27 415 aa16.42■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Rpa1Q8VEE4 623 aaKnown RBP16.42■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Hspbp1Q99P31 357 aaKnown RBP16.42■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Rasgrp1Q9Z1S3 795 aa16.42■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Nlrp1bA1Z198 1177 aa16.42■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Gm10436L7N1Y3 520 aa16.42■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Gm3187M0QWW3 260 aa16.42■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 DtnbO70585 659 aa16.42■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Eif3eP60229 445 aaKnown RBP16.42■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Ces5aQ6AW46 575 aa16.42■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Pip4k2cQ91XU3 421 aa16.42■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Morc3F7BJB9 942 aaKnown RBP16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 ScocQ78YZ6 125 aa16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Letm2Q7TNU7 480 aa16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 TbataQ7TSD4 393 aa16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Fam49aQ8BHZ0 323 aa16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Tsen34Q8BMZ5 316 aa16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Spice1Q8C804 860 aa16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Adi1Q99JT9 179 aa16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Flt1P35969 1333 aa16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Fam167bP17257 162 aa16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 NficP70255 439 aa16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Col6a1Q04857 1025 aa16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Ppp4r3cQ3V0Y1 813 aa16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Pacsin1Q61644 441 aa16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 RetsatQ64FW2 609 aa16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Trim36Q80WG7 729 aa16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 PreplQ8C167 725 aa16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 MlphQ91V27 590 aa16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Ndufa13Q9ERS2 144 aa16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Cdc42bpaQ3UU96 1719 aa16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 YwhahP68510 246 aaKnown RBP16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Mapk4Q6P5G0 583 aa16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Olfr1415Q7TQS4 311 aa16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Llgl1Q80Y17 1036 aa16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Znf598Q80YR4 908 aaKnown RBP16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Arhgap15Q811M1 481 aa16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 FtoQ8BGW1 502 aa16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Dpp9Q8BVG4 862 aa16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Olfr1416Q8VGU4 312 aa16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 HnrnprQ8VHM5 632 aaKnown RBP16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Akr1c14Q91WT7 323 aa16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 YwhabQ9CQV8 246 aaKnown RBP16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Ccdc97Q9DBT3 340 aa16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Angptl2Q9R045 493 aa16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Fxr2Q9WVR4 673 aaKnown RBP16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Dip2aQ8BWT5 1523 aa16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Plekhg4A0A1L1SU27 1217 aa16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Rad51ap2G3UW63 976 aa16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Npas2P97460 816 aa16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Ttc39dQ0VF76 604 aa16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Hsdl2Q2TPA8 490 aaKnown RBP16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Rmnd1Q8CI78 450 aa16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Kiaa0319lQ8K135 1048 aa16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 MajinQ9D992 256 aa16.41■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Serpinb3cA2RSF9 386 aa16.4■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Ak9G3UYQ4 1894 aa16.4■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Heatr9Q5QNV8 569 aa16.4■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Fam102bQ8BQS4 339 aa16.4■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Pnma1Q8C1C8 353 aa16.4■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 A430089I19RikQ8C9W1 407 aa16.4■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Sf3b3Q921M3 1217 aaKnown RBP16.4■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 RnmtQ9D0L8 465 aaKnown RBP16.4■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Actr2P61161 394 aa16.4■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Tmem35bQ3U0Y2 150 aa16.4■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Tmem109Q3UBX0 243 aa16.4■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Dab2ipQ3UHC7 1189 aa16.4■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Zbtb39Q6PDK0 712 aa16.4■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 HibchQ8QZS1 385 aa16.4■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Ppp1r16bQ8VHQ3 568 aa16.4■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Mccc1Q99MR8 717 aa16.4■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Aldh1b1Q9CZS1 519 aa16.4■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Chordc1Q9D1P4 331 aaKnown RBP16.4■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 PodxlQ9R0M4 503 aa16.4■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Robo2Q7TPD3 1470 aa16.4■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Ankrd63A2ARS0 390 aa16.4■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Vmn2r121A2BE32 847 aa16.4■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Scg3P47867 471 aa16.4■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 CtshP49935 333 aa16.4■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Lilrb4Q64281 335 aa16.4■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Leng8Q8CBY3 785 aaKnown RBP16.4■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Vps37aQ8CHS8 397 aa16.4■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Fip1l1Q9D824 581 aaKnown RBP16.4■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Znf541Q0GGX2 1363 aa16.4■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 SynrgQ5SV85 1306 aa16.4■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 Fbxl16A2RT62 479 aa16.4■□□□□ 0.22
Pcdha9-201ENSMUST00000115659 GalcP54818 684 aa16.4■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 42.2 ms