RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Ric8bQ80XE1 520 aa16.53■□□□□ 0.24
Ubr3-201ENSMUST00000055758 Msi2Q920Q6 346 aaKnown RBP16.53■□□□□ 0.24
Ubr3-201ENSMUST00000055758 Igf2bp3Q9CPN8 579 aaKnown RBP16.53■□□□□ 0.24
Ubr3-201ENSMUST00000055758 PycardQ9EPB4 193 aa16.53■□□□□ 0.24
Ubr3-201ENSMUST00000055758 Adarb2Q9JI20 745 aa16.53■□□□□ 0.24
Ubr3-201ENSMUST00000055758 Mrc2Q64449 1479 aa16.53■□□□□ 0.24
Ubr3-201ENSMUST00000055758 Usp10P52479 792 aaKnown RBP16.53■□□□□ 0.24
Ubr3-201ENSMUST00000055758 Ifit3Q64345 403 aa16.53■□□□□ 0.24
Ubr3-201ENSMUST00000055758 Fastkd1Q6DI86 829 aa16.53■□□□□ 0.24
Ubr3-201ENSMUST00000055758 EmsyQ8BMB0 1264 aaKnown RBP16.53■□□□□ 0.24
Ubr3-201ENSMUST00000055758 Fsd1lQ8BYN5 507 aa16.53■□□□□ 0.24
Ubr3-201ENSMUST00000055758 Arhgap25Q8BYW1 648 aa16.53■□□□□ 0.24
Ubr3-201ENSMUST00000055758 Wdr60Q8C761 999 aa16.53■□□□□ 0.24
Ubr3-201ENSMUST00000055758 PpidQ9CR16 370 aaKnown RBP16.53■□□□□ 0.24
Ubr3-201ENSMUST00000055758 Rims1Q99NE5 1463 aa16.52■□□□□ 0.24
Ubr3-201ENSMUST00000055758 Pgk2P09041 417 aa16.52■□□□□ 0.24
Ubr3-201ENSMUST00000055758 Atxn10P28658 475 aa16.52■□□□□ 0.24
Ubr3-201ENSMUST00000055758 Ttc26Q8BS45 554 aa16.52■□□□□ 0.24
Ubr3-201ENSMUST00000055758 NcaphQ8C156 731 aa16.52■□□□□ 0.24
Ubr3-201ENSMUST00000055758 Osbpl9A2A8Z1 736 aa16.52■□□□□ 0.24
Ubr3-201ENSMUST00000055758 R3hdm1E9Q9Q2 1135 aaKnown RBP16.52■□□□□ 0.24
Ubr3-201ENSMUST00000055758 Trpm8Q8R4D5 1104 aa16.52■□□□□ 0.24
Ubr3-201ENSMUST00000055758 Drap1Q9D6N5 205 aa16.52■□□□□ 0.24
Ubr3-201ENSMUST00000055758 Xlr3aQ60595 226 aa16.52■□□□□ 0.24
Ubr3-201ENSMUST00000055758 Pcdhb14Q6PB90 796 aa16.52■□□□□ 0.24
Ubr3-201ENSMUST00000055758 Best2Q8BGM5 508 aa16.52■□□□□ 0.24
Ubr3-201ENSMUST00000055758 Map10Q8BJS7 891 aa16.52■□□□□ 0.24
Ubr3-201ENSMUST00000055758 Tmem120aQ8C1E7 343 aa16.52■□□□□ 0.24
Ubr3-201ENSMUST00000055758 WdpcpQ8C456 722 aa16.52■□□□□ 0.24
Ubr3-201ENSMUST00000055758 Guca1bQ8VBV8 201 aa16.52■□□□□ 0.24
Ubr3-201ENSMUST00000055758 C1qtnf1Q9QXP7 281 aa16.52■□□□□ 0.24
Ubr3-201ENSMUST00000055758 Mroh6V9GX81 722 aa16.52■□□□□ 0.24
Ubr3-201ENSMUST00000055758 Adcy10Q8C0T9 1614 aa16.52■□□□□ 0.24
Ubr3-201ENSMUST00000055758 Ephx4Q6IE26 359 aa16.52■□□□□ 0.23
Ubr3-201ENSMUST00000055758 PolrmtQ8BKF1 1207 aaKnown RBP16.52■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Mknk2Q8CDB0 459 aa16.52■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Unc45bQ8CGY6 931 aaKnown RBP16.52■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Tekt1Q9DAJ2 418 aa16.52■□□□□ 0.23
Ubr3-201ENSMUST00000055758 HaspinQ9Z0R0 754 aa16.52■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Ifnb1P01575 182 aa16.52■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Capza2P47754 286 aa16.52■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Parp9Q8CAS9 866 aa16.52■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Pphln1Q8K2H1 381 aaKnown RBP16.52■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Med15Q924H2 789 aa16.52■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Zfp788E9Q980 884 aa16.52■□□□□ 0.23
Ubr3-201ENSMUST00000055758 C2P21180 760 aa16.52■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Hnrnph2P70333 449 aaKnown RBP16.52■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Gm3414Q3TNU4 584 aa16.52■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Bbs1Q3V3N7 593 aa16.52■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Avpr1aQ62463 423 aa16.52■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Sap130Q8BIH0 1057 aa16.52■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Smyd2Q8R5A0 433 aa16.52■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Prdm11A2AGX3 565 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Grk4O70291 574 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Dpp7Q9ET22 506 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Uts2Q9QZQ3 123 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Sat1P48026 171 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Fam83bQ0VBM2 1012 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Rasa3Q60790 834 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Q3TQQ9 903 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Znf746Q3U133 652 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 BegainQ68EF6 600 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Znf12Q7TSI0 686 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Slc7a14Q8BXR1 771 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Vmn1r213Q8R278 384 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 CsadQ9DBE0 493 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Vmn2r79E9Q067 851 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Orc4O88708 433 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 BC051142Q3V0M8 400 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Afap1l2Q5DTU0 825 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 CyldQ80TQ2 952 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Cpa5Q8R4H4 436 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 NptxrQ99J85 493 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Bbs2Q9CWF6 721 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Dynll2Q9D0M5 89 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Cxcl11Q9JHH5 100 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 AceP09470 1312 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 1700024B05RikE9Q6D7 167 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Cyp3a25O09158 503 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Wfs1P56695 890 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Ccdc127Q3TC33 260 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Pla2g4cQ64GA5 597 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Cpa1Q7TPZ8 419 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Kcnf1Q7TSH7 493 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Ankrd13aQ80UP5 588 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 GzmnQ920S1 248 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 GatbQ99JT1 557 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Mrpl46Q9EQI8 283 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Tubb1A2AQ07 451 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Vps4bP46467 444 aaKnown RBP16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Zfp454Q80Y34 536 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 ThtpaQ8JZL3 224 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Plxnc1Q9QZC2 1574 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Kif24Q6NWW5 1356 aa16.51■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Gm5152L7N200 190 aa16.5■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Aoc3O70423 765 aa16.5■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Mark3Q03141 753 aa16.5■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Tab3Q571K4 716 aa16.5■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Papd5Q68ED3 633 aaKnown RBP16.5■□□□□ 0.23
Ubr3-201ENSMUST00000055758 Rnf31Q924T7 1066 aa16.5■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 24.9 ms