RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Prpf4Q9DAW6 521 aaKnown RBP10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Tbx18Q9EPZ6 613 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Rnf103Q9R1W3 683 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Fam205aA2APU8 1308 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Syt2P46097 422 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Vps4bP46467 444 aaKnown RBP10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Nub1P54729 614 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 PrkcbP68404 671 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Msx3P70354 204 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Phactr1Q2M3X8 580 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Q3TQQ9 903 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 PhkbQ7TSH2 1085 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Nop9Q8BMC4 636 aaKnown RBP10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Rabep2Q91WG2 554 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Capn9Q9D805 690 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Ppp1r2Q9DCL8 206 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Gm5114W4VSN8 858 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Zmym2Q9CU65 1376 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Lig1P37913 916 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Fam47cQ14BE7 430 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Pid1Q3UBG2 217 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Ppp2r5cQ60996 524 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Ino80dQ66JY2 873 aaKnown RBP10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Skiv2lQ6NZR5 1244 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Ube2q2Q8K2Z8 378 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 AagabQ8R2R3 316 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Cdc26Q99JP4 85 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 4921530L21RikQ9CQ47 274 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Rasgrp1Q9Z1S3 795 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Rsrc2A2RTL5 376 aaKnown RBP10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Hsf3D0VYS2 492 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 SelenovD3YXG1 328 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 SftpdP50404 374 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Dab2P98078 766 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Pnpt1Q8K1R3 783 aaKnown RBP10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Slc44a4Q91VA1 707 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 SmtnQ921U8 923 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Ddx56Q9D0R4 546 aaKnown RBP10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Ubiad1Q9DC60 336 aa10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Atp13a1Q9EPE9 1200 aaKnown RBP10.93□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Gm28360A0A087WR25 190 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 1700003F12RikA2AKE5 210 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Art2bO35975 289 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Prl2c3P04768 224 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Cap1P40124 474 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Fgfr4Q03142 799 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Ano5Q75UR0 904 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Phka2Q8BWJ3 1235 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Vcpip1Q8CDG3 1220 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Tasp1Q8R1G1 420 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Cpa5Q8R4H4 436 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Tdrd3Q91W18 743 aaKnown RBP10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Mmtag2Q99LX5 260 aaKnown RBP10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Rpap3Q9D706 660 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Mrpl4Q9DCU6 294 aaKnown RBP10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Kcnh7Q9ER47 1195 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Zfp212G3X8R7 492 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Kcna1P16388 495 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Gm4952Q5FW57 296 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 FntaQ61239 377 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Cd180Q62192 661 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Arhgap15Q811M1 481 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Daam1Q8BPM0 1077 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Q8C1R3 189 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Unc45bQ8CGY6 931 aaKnown RBP10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Olfr395Q8VGR3 312 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Prkag2Q91WG5 566 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Trim7Q923T7 510 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Cdk5rap3Q99LM2 503 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Emc2Q9CRD2 297 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Cyth1Q9QX11 398 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Oog1E9Q5G7 496 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Exoc7O35250 697 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Eno1P17182 434 aaKnown RBP10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Gm4981Q3ULJ8 291 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Serpinb6dQ3UWK8 375 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Tbc1d1Q60949 1255 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Heatr3Q8BQM4 679 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Dclre1bQ8C7W7 541 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Actl9Q8CG27 415 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Pcsk1nQ9QXV0 258 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Ggps1Q9WTN0 300 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Nfx1B1AY10 1114 aaKnown RBP10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Olfr67F8VPJ8 320 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 AfmO89020 608 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Casp8O89110 480 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Bcat1P24288 386 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Cdc25cP48967 447 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Usp10P52479 792 aaKnown RBP10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Chrna5Q2MKA5 467 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Tmprss11aQ3UQ41 389 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Znf148Q61624 794 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Akap7Q7TN79 314 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Trim62Q80V85 475 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Serpina3bQ8BYY9 420 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Abi1Q8CBW3 481 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 HscbQ8K3A0 234 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Alg1Q921Q3 482 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Setd6Q9CWY3 473 aa10.92□□□□□ -0.66
Ccdc40-201ENSMUST00000035935 Slc8a3S4R2P9 928 aa10.92□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms