RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 MICAL1Q8TDZ2 1067 aa16.59■□□□□ 0.25
PHGDH-231ENST00000641939 KIFC3Q9BVG8 833 aa16.59■□□□□ 0.25
PHGDH-231ENST00000641939 RNF39Q9H2S5 420 aa16.59■□□□□ 0.25
PHGDH-231ENST00000641939 NRDE2Q9H7Z3 1164 aa16.59■□□□□ 0.25
PHGDH-231ENST00000641939 KANSL3Q9P2N6 904 aa16.59■□□□□ 0.25
PHGDH-231ENST00000641939 HES2Q9Y543 173 aa16.59■□□□□ 0.25
PHGDH-231ENST00000641939 CCDC169A6NNP5 214 aa16.58■□□□□ 0.24
PHGDH-231ENST00000641939 NT5C1B-RDH14C9J2C7 533 aa16.58■□□□□ 0.24
PHGDH-231ENST00000641939 FSCN2O14926 492 aa16.58■□□□□ 0.24
PHGDH-231ENST00000641939 N4BP3O15049 544 aa16.58■□□□□ 0.24
PHGDH-231ENST00000641939 PLA2G4BP0C869 781 aa16.58■□□□□ 0.24
PHGDH-231ENST00000641939 LIG1P18858 919 aa16.58■□□□□ 0.24
PHGDH-231ENST00000641939 GUCY2CP25092 1073 aa16.58■□□□□ 0.24
PHGDH-231ENST00000641939 SLC12A3P55017 1021 aa16.58■□□□□ 0.24
PHGDH-231ENST00000641939 MAPK7Q13164 816 aa16.58■□□□□ 0.24
PHGDH-231ENST00000641939 DMP1Q13316 513 aaPredicted RBP16.58■□□□□ 0.24
PHGDH-231ENST00000641939 TMEM132AQ24JP5 1023 aa16.58■□□□□ 0.24
PHGDH-231ENST00000641939 CTC1Q2NKJ3 1217 aa16.58■□□□□ 0.24
PHGDH-231ENST00000641939 LEXMQ3ZCV2 418 aa16.58■□□□□ 0.24
PHGDH-231ENST00000641939 EP400NLQ6ZTU2 488 aa16.58■□□□□ 0.24
PHGDH-231ENST00000641939 ZNF280BQ86YH2 543 aa16.58■□□□□ 0.24
PHGDH-231ENST00000641939 RASSF8Q8NHQ8 419 aa16.58■□□□□ 0.24
PHGDH-231ENST00000641939 TMEM169Q96HH4 297 aa16.58■□□□□ 0.24
PHGDH-231ENST00000641939 FAM193BQ96PV7 902 aaPredicted RBP16.58■□□□□ 0.24
PHGDH-231ENST00000641939 APOL6Q9BWW8 343 aa16.58■□□□□ 0.24
PHGDH-231ENST00000641939 GBP3Q9H0R5 595 aa16.58■□□□□ 0.24
PHGDH-231ENST00000641939 NXF3Q9H4D5 531 aaKnown RBP16.58■□□□□ 0.24
PHGDH-231ENST00000641939 IGFLR1Q9H665 355 aa16.58■□□□□ 0.24
PHGDH-231ENST00000641939 C17orf75Q9HAS0 396 aa16.58■□□□□ 0.24
PHGDH-231ENST00000641939 CLDND1Q9NY35 253 aa16.58■□□□□ 0.24
PHGDH-231ENST00000641939 KCND2Q9NZV8 630 aa16.58■□□□□ 0.24
PHGDH-231ENST00000641939 PCDHGC5Q9Y5F6 944 aa16.58■□□□□ 0.24
PHGDH-231ENST00000641939 ARL5CA6NH57 179 aa16.57■□□□□ 0.24
PHGDH-231ENST00000641939 TTLL13PA6NNM8 815 aa16.57■□□□□ 0.24
PHGDH-231ENST00000641939 K7ERI5 159 aa16.57■□□□□ 0.24
PHGDH-231ENST00000641939 INPPL1O15357 1258 aa16.57■□□□□ 0.24
PHGDH-231ENST00000641939 POMCP01189 267 aa16.57■□□□□ 0.24
PHGDH-231ENST00000641939 PDIA4P13667 645 aaKnown RBP16.57■□□□□ 0.24
PHGDH-231ENST00000641939 MARCKSP29966 332 aaPredicted RBP16.57■□□□□ 0.24
PHGDH-231ENST00000641939 GTF2F1P35269 517 aaKnown RBP eCLIP16.57■□□□□ 0.24
PHGDH-231ENST00000641939 NPTX2P47972 431 aa16.57■□□□□ 0.24
PHGDH-231ENST00000641939 AFF1P51825 1210 aaKnown RBP16.57■□□□□ 0.24
PHGDH-231ENST00000641939 CEBPZQ03701 1054 aaKnown RBP16.57■□□□□ 0.24
PHGDH-231ENST00000641939 RAD51AP2Q09MP3 1159 aa16.57■□□□□ 0.24
PHGDH-231ENST00000641939 ADGRD2Q7Z7M1 963 aa16.57■□□□□ 0.24
PHGDH-231ENST00000641939 ADAMTS19Q8TE59 1207 aa16.57■□□□□ 0.24
PHGDH-231ENST00000641939 GAD1Q99259 594 aa16.57■□□□□ 0.24
PHGDH-231ENST00000641939 ADPGKQ9BRR6 497 aa16.57■□□□□ 0.24
PHGDH-231ENST00000641939 PDZD7Q9H5P4 517 aa16.57■□□□□ 0.24
PHGDH-231ENST00000641939 NGRNQ9NPE2 291 aaKnown RBP16.57■□□□□ 0.24
PHGDH-231ENST00000641939 KMT5AQ9NQR1 393 aa16.57■□□□□ 0.24
PHGDH-231ENST00000641939 ENTPD7Q9NQZ7 604 aa16.57■□□□□ 0.24
PHGDH-231ENST00000641939 DNAJB4Q9UDY4 337 aa16.57■□□□□ 0.24
PHGDH-231ENST00000641939 GIT1Q9Y2X7 761 aa16.57■□□□□ 0.24
PHGDH-231ENST00000641939 SRPRBQ9Y5M8 271 aaKnown RBP16.57■□□□□ 0.24
PHGDH-231ENST00000641939 PHLPP2Q6ZVD8 1323 aa16.56■□□□□ 0.24
PHGDH-231ENST00000641939 B4GALT3O60512 393 aa16.56■□□□□ 0.24
PHGDH-231ENST00000641939 DDHD2O94830 711 aa16.56■□□□□ 0.24
PHGDH-231ENST00000641939 EDN1P05305 212 aa16.56■□□□□ 0.24
PHGDH-231ENST00000641939 GALTP07902 379 aa16.56■□□□□ 0.24
PHGDH-231ENST00000641939 PLCG1P19174 1290 aa16.56■□□□□ 0.24
PHGDH-231ENST00000641939 MLH1P40692 756 aa16.56■□□□□ 0.24
PHGDH-231ENST00000641939 NRIP1P48552 1158 aa16.56■□□□□ 0.24
PHGDH-231ENST00000641939 SLC11A1P49279 550 aa16.56■□□□□ 0.24
PHGDH-231ENST00000641939 KARSQ15046 597 aaKnown RBP16.56■□□□□ 0.24
PHGDH-231ENST00000641939 PLPP4Q5VZY2 271 aa16.56■□□□□ 0.24
PHGDH-231ENST00000641939 RBM23Q86U06 439 aaKnown RBP16.56■□□□□ 0.24
PHGDH-231ENST00000641939 IGSF21Q96ID5 467 aa16.56■□□□□ 0.24
PHGDH-231ENST00000641939 USP28Q96RU2 1077 aa16.56■□□□□ 0.24
PHGDH-231ENST00000641939 TCF25Q9BQ70 676 aa16.56■□□□□ 0.24
PHGDH-231ENST00000641939 CCSER1Q9C0I3 900 aa16.56■□□□□ 0.24
PHGDH-231ENST00000641939 TLE6Q9H808 572 aa16.56■□□□□ 0.24
PHGDH-231ENST00000641939 ARHGAP28Q9P2N2 729 aa16.56■□□□□ 0.24
PHGDH-231ENST00000641939 DAXXQ9UER7 740 aaPredicted RBP16.56■□□□□ 0.24
PHGDH-231ENST00000641939 KCNG1Q9UIX4 513 aa16.56■□□□□ 0.24
PHGDH-231ENST00000641939 FBXO2Q9UK22 296 aaPredicted RBP16.56■□□□□ 0.24
PHGDH-231ENST00000641939 USP20Q9Y2K6 914 aa16.56■□□□□ 0.24
PHGDH-231ENST00000641939 RBM19Q9Y4C8 960 aaKnown RBP16.56■□□□□ 0.24
PHGDH-231ENST00000641939 MORC2Q9Y6X9 1032 aaPredicted RBP16.56■□□□□ 0.24
PHGDH-231ENST00000641939 CITO14578 2027 aa16.55■□□□□ 0.24
PHGDH-231ENST00000641939 ZMYM2Q9UBW7 1377 aa16.55■□□□□ 0.24
PHGDH-231ENST00000641939 SFI1A8K8P3 1242 aa16.55■□□□□ 0.24
PHGDH-231ENST00000641939 H3BQ06 376 aaPredicted RBP16.55■□□□□ 0.24
PHGDH-231ENST00000641939 AKAP5P24588 427 aa16.55■□□□□ 0.24
PHGDH-231ENST00000641939 LTBRP36941 435 aa16.55■□□□□ 0.24
PHGDH-231ENST00000641939 ADAM15Q13444 863 aa16.55■□□□□ 0.24
PHGDH-231ENST00000641939 SLC39A14Q15043 492 aa16.55■□□□□ 0.24
PHGDH-231ENST00000641939 ARSHQ5FYA8 562 aa16.55■□□□□ 0.24
PHGDH-231ENST00000641939 NT5DC1Q5TFE4 455 aa16.55■□□□□ 0.24
PHGDH-231ENST00000641939 TMC7Q7Z402 723 aa16.55■□□□□ 0.24
PHGDH-231ENST00000641939 TMEM173Q86WV6 379 aaPredicted RBP16.55■□□□□ 0.24
PHGDH-231ENST00000641939 EFHBQ8N7U6 833 aa16.55■□□□□ 0.24
PHGDH-231ENST00000641939 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.55■□□□□ 0.24
PHGDH-231ENST00000641939 SPIRE2Q8WWL2 714 aa16.55■□□□□ 0.24
PHGDH-231ENST00000641939 RAD54LQ92698 747 aa16.55■□□□□ 0.24
PHGDH-231ENST00000641939 EPSTI1Q96J88 318 aa16.55■□□□□ 0.24
PHGDH-231ENST00000641939 ZFP42Q96MM3 310 aa16.55■□□□□ 0.24
PHGDH-231ENST00000641939 UHRF1Q96T88 793 aaPredicted RBP16.55■□□□□ 0.24
PHGDH-231ENST00000641939 TMEM175Q9BSA9 504 aa16.55■□□□□ 0.24
PHGDH-231ENST00000641939 NTPCRQ9BSD7 190 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms