RNA–Protein interactions for RNA: ENST00000641715.1

SAMMSON-221, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-221ENST00000641715 KIFC3Q9BVG8 833 aa13.02□□□□□ -0.33
SAMMSON-221ENST00000641715 GBP3Q9H0R5 595 aa13.02□□□□□ -0.33
SAMMSON-221ENST00000641715 C2orf40Q9H1Z8 148 aa13.02□□□□□ -0.33
SAMMSON-221ENST00000641715 NXF3Q9H4D5 531 aaKnown RBP13.02□□□□□ -0.33
SAMMSON-221ENST00000641715 PUF60Q9UHX1 559 aaKnown RBP13.02□□□□□ -0.33
SAMMSON-221ENST00000641715 USP20Q9Y2K6 914 aa13.02□□□□□ -0.33
SAMMSON-221ENST00000641715 ARL5CA6NH57 179 aa13.01□□□□□ -0.33
SAMMSON-221ENST00000641715 PER2O15055 1255 aa13.01□□□□□ -0.33
SAMMSON-221ENST00000641715 HIP1RO75146 1068 aa13.01□□□□□ -0.33
SAMMSON-221ENST00000641715 DDHD2O94830 711 aa13.01□□□□□ -0.33
SAMMSON-221ENST00000641715 NPTXRO95502 500 aa13.01□□□□□ -0.33
SAMMSON-221ENST00000641715 BMP15O95972 392 aa13.01□□□□□ -0.33
SAMMSON-221ENST00000641715 POMCP01189 267 aa13.01□□□□□ -0.33
SAMMSON-221ENST00000641715 GALTP07902 379 aa13.01□□□□□ -0.33
SAMMSON-221ENST00000641715 RESTQ13127 1097 aa13.01□□□□□ -0.33
SAMMSON-221ENST00000641715 MAPK6Q16659 721 aa13.01□□□□□ -0.33
SAMMSON-221ENST00000641715 PDE12Q6L8Q7 609 aaKnown RBP13.01□□□□□ -0.33
SAMMSON-221ENST00000641715 FAM173BQ6P4H8 233 aa13.01□□□□□ -0.33
SAMMSON-221ENST00000641715 URGCPQ8TCY9 931 aa13.01□□□□□ -0.33
SAMMSON-221ENST00000641715 BCL7CQ8WUZ0 217 aaPredicted RBP13.01□□□□□ -0.33
SAMMSON-221ENST00000641715 AK8Q96MA6 479 aa13.01□□□□□ -0.33
SAMMSON-221ENST00000641715 ZFP42Q96MM3 310 aa13.01□□□□□ -0.33
SAMMSON-221ENST00000641715 TCF25Q9BQ70 676 aa13.01□□□□□ -0.33
SAMMSON-221ENST00000641715 TRIM6Q9C030 488 aaPredicted RBP13.01□□□□□ -0.33
SAMMSON-221ENST00000641715 NT5C3AQ9H0P0 336 aa13.01□□□□□ -0.33
SAMMSON-221ENST00000641715 TLE6Q9H808 572 aa13.01□□□□□ -0.33
SAMMSON-221ENST00000641715 UBN1Q9NPG3 1134 aa13.01□□□□□ -0.33
SAMMSON-221ENST00000641715 KANSL3Q9P2N6 904 aa13.01□□□□□ -0.33
SAMMSON-221ENST00000641715 MTMR6Q9Y217 621 aa13.01□□□□□ -0.33
SAMMSON-221ENST00000641715 CLIC4Q9Y696 253 aa13.01□□□□□ -0.33
SAMMSON-221ENST00000641715 HIDE1A8MVS5 230 aa13□□□□□ -0.33
SAMMSON-221ENST00000641715 ACKR2O00590 384 aa13□□□□□ -0.33
SAMMSON-221ENST00000641715 INPPL1O15357 1258 aa13□□□□□ -0.33
SAMMSON-221ENST00000641715 TBX10O75333 385 aa13□□□□□ -0.33
SAMMSON-221ENST00000641715 PRKCBP05771 671 aa13□□□□□ -0.33
SAMMSON-221ENST00000641715 LIG1P18858 919 aa13□□□□□ -0.33
SAMMSON-221ENST00000641715 AKAP5P24588 427 aa13□□□□□ -0.33
SAMMSON-221ENST00000641715 MLH1P40692 756 aa13□□□□□ -0.33
SAMMSON-221ENST00000641715 SLC11A1P49279 550 aa13□□□□□ -0.33
SAMMSON-221ENST00000641715 RAD51AP2Q09MP3 1159 aa13□□□□□ -0.33
SAMMSON-221ENST00000641715 MAPK7Q13164 816 aa13□□□□□ -0.33
SAMMSON-221ENST00000641715 PRPF4BQ13523 1007 aaKnown RBP13□□□□□ -0.33
SAMMSON-221ENST00000641715 PTPAQ15257 358 aa13□□□□□ -0.33
SAMMSON-221ENST00000641715 TMEM119Q4V9L6 283 aa13□□□□□ -0.33
SAMMSON-221ENST00000641715 PLPP4Q5VZY2 271 aa13□□□□□ -0.33
SAMMSON-221ENST00000641715 PTCRAQ6ISU1 281 aaPredicted RBP13□□□□□ -0.33
SAMMSON-221ENST00000641715 TMC7Q7Z402 723 aa13□□□□□ -0.33
SAMMSON-221ENST00000641715 CABP7Q86V35 215 aa13□□□□□ -0.33
SAMMSON-221ENST00000641715 KCTD17Q8N5Z5 321 aa13□□□□□ -0.33
SAMMSON-221ENST00000641715 EFHBQ8N7U6 833 aa13□□□□□ -0.33
SAMMSON-221ENST00000641715 SYT2Q8N9I0 419 aaPredicted RBP13□□□□□ -0.33
SAMMSON-221ENST00000641715 LRRC15Q8TF66 581 aa13□□□□□ -0.33
SAMMSON-221ENST00000641715 IGSF21Q96ID5 467 aa13□□□□□ -0.33
SAMMSON-221ENST00000641715 CDK5RAP3Q96JB5 506 aa13□□□□□ -0.33
SAMMSON-221ENST00000641715 GAD1Q99259 594 aa13□□□□□ -0.33
SAMMSON-221ENST00000641715 APOL6Q9BWW8 343 aa13□□□□□ -0.33
SAMMSON-221ENST00000641715 PDZD7Q9H5P4 517 aa13□□□□□ -0.33
SAMMSON-221ENST00000641715 ENTPD7Q9NQZ7 604 aa13□□□□□ -0.33
SAMMSON-221ENST00000641715 MIOSQ9NXC5 875 aa13□□□□□ -0.33
SAMMSON-221ENST00000641715 TDRD15B5MCY1 1934 aaKnown RBP13□□□□□ -0.33
SAMMSON-221ENST00000641715 GRXCR2A6NFK2 248 aa12.99□□□□□ -0.33
SAMMSON-221ENST00000641715 SFI1A8K8P3 1242 aa12.99□□□□□ -0.33
SAMMSON-221ENST00000641715 TNFRSF10AO00220 468 aa12.99□□□□□ -0.33
SAMMSON-221ENST00000641715 STX6O43752 255 aa12.99□□□□□ -0.33
SAMMSON-221ENST00000641715 GLP2RO95838 553 aa12.99□□□□□ -0.33
SAMMSON-221ENST00000641715 SSBP05455 408 aaKnown RBP eCLIP12.99□□□□□ -0.33
SAMMSON-221ENST00000641715 IL9P15248 144 aa12.99□□□□□ -0.33
SAMMSON-221ENST00000641715 UBA7P41226 1012 aa12.99□□□□□ -0.33
SAMMSON-221ENST00000641715 NPTX2P47972 431 aa12.99□□□□□ -0.33
SAMMSON-221ENST00000641715 EFNA5P52803 228 aa12.99□□□□□ -0.33
SAMMSON-221ENST00000641715 SLC12A3P55017 1021 aa12.99□□□□□ -0.33
SAMMSON-221ENST00000641715 PEX3P56589 373 aa12.99□□□□□ -0.33
SAMMSON-221ENST00000641715 RBM10P98175 930 aaKnown RBP12.99□□□□□ -0.33
SAMMSON-221ENST00000641715 CLUL1Q15846 466 aa12.99□□□□□ -0.33
SAMMSON-221ENST00000641715 GSTCDQ8NEC7 633 aa12.99□□□□□ -0.33
SAMMSON-221ENST00000641715 TMEM169Q96HH4 297 aa12.99□□□□□ -0.33
SAMMSON-221ENST00000641715 DRC1Q96MC2 740 aa12.99□□□□□ -0.33
SAMMSON-221ENST00000641715 NGRNQ9NPE2 291 aaKnown RBP12.99□□□□□ -0.33
SAMMSON-221ENST00000641715 CLEC1BQ9P126 229 aa12.99□□□□□ -0.33
SAMMSON-221ENST00000641715 GIT1Q9Y2X7 761 aa12.99□□□□□ -0.33
SAMMSON-221ENST00000641715 MYH11P35749 1972 aa12.99□□□□□ -0.33
SAMMSON-221ENST00000641715 CCDC169A6NNP5 214 aa12.98□□□□□ -0.33
SAMMSON-221ENST00000641715 K7ERI5 159 aa12.98□□□□□ -0.33
SAMMSON-221ENST00000641715 N4BP3O15049 544 aa12.98□□□□□ -0.33
SAMMSON-221ENST00000641715 PLA2G4BP0C869 781 aa12.98□□□□□ -0.33
SAMMSON-221ENST00000641715 GUCY2CP25092 1073 aa12.98□□□□□ -0.33
SAMMSON-221ENST00000641715 MARCKSP29966 332 aaPredicted RBP12.98□□□□□ -0.33
SAMMSON-221ENST00000641715 LONP1P36776 959 aaKnown RBP12.98□□□□□ -0.33
SAMMSON-221ENST00000641715 NDUFV1P49821 464 aa12.98□□□□□ -0.33
SAMMSON-221ENST00000641715 SCNN1GP51170 649 aa12.98□□□□□ -0.33
SAMMSON-221ENST00000641715 CEBPZQ03701 1054 aaKnown RBP12.98□□□□□ -0.33
SAMMSON-221ENST00000641715 DMP1Q13316 513 aaPredicted RBP12.98□□□□□ -0.33
SAMMSON-221ENST00000641715 DUSP6Q16828 381 aa12.98□□□□□ -0.33
SAMMSON-221ENST00000641715 TMEM132AQ24JP5 1023 aa12.98□□□□□ -0.33
SAMMSON-221ENST00000641715 NT5DC1Q5TFE4 455 aa12.98□□□□□ -0.33
SAMMSON-221ENST00000641715 EEF1DP3Q658K8 133 aa12.98□□□□□ -0.33
SAMMSON-221ENST00000641715 DDX53Q86TM3 631 aaKnown RBP12.98□□□□□ -0.33
SAMMSON-221ENST00000641715 VPS52Q8N1B4 723 aa12.98□□□□□ -0.33
SAMMSON-221ENST00000641715 MRPL43Q8N983 215 aaKnown RBP12.98□□□□□ -0.33
SAMMSON-221ENST00000641715 VN1R2Q8NFZ6 395 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms