RNA–Protein interactions for RNA: ENST00000641411.1

CASC19-227, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,285 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-227ENST00000641411 ETNPPLQ8TBG4 499 aa8.47□□□□□ -1.05
CASC19-227ENST00000641411 LRRC15Q8TF66 581 aa8.47□□□□□ -1.05
CASC19-227ENST00000641411 BCL7CQ8WUZ0 217 aaPredicted RBP8.47□□□□□ -1.05
CASC19-227ENST00000641411 LPAR1Q92633 364 aa8.47□□□□□ -1.05
CASC19-227ENST00000641411 HOOK2Q96ED9 719 aa8.47□□□□□ -1.05
CASC19-227ENST00000641411 CDK5RAP3Q96JB5 506 aa8.47□□□□□ -1.05
CASC19-227ENST00000641411 MAF1Q9H063 256 aa8.47□□□□□ -1.05
CASC19-227ENST00000641411 BLZF1Q9H2G9 400 aa8.47□□□□□ -1.05
CASC19-227ENST00000641411 EHMT1Q9H9B1 1298 aa8.47□□□□□ -1.05
CASC19-227ENST00000641411 FEM1BQ9UK73 627 aa8.47□□□□□ -1.05
CASC19-227ENST00000641411 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.47□□□□□ -1.05
CASC19-227ENST00000641411 RBBP6Q7Z6E9 1792 aaKnown RBP8.47□□□□□ -1.05
CASC19-227ENST00000641411 DOCK1Q14185 1865 aa8.47□□□□□ -1.05
CASC19-227ENST00000641411 CLRN2A0PK11 232 aa8.46□□□□□ -1.06
CASC19-227ENST00000641411 ECEL1O95672 775 aa8.46□□□□□ -1.06
CASC19-227ENST00000641411 FGFR1OPO95684 399 aaKnown RBP8.46□□□□□ -1.06
CASC19-227ENST00000641411 CASP1P29466 404 aa8.46□□□□□ -1.06
CASC19-227ENST00000641411 ASIC1P78348 528 aa8.46□□□□□ -1.06
CASC19-227ENST00000641411 KRT31Q15323 416 aa8.46□□□□□ -1.06
CASC19-227ENST00000641411 SYCP1Q15431 976 aa8.46□□□□□ -1.06
CASC19-227ENST00000641411 SHROOM1Q2M3G4 852 aaPredicted RBP8.46□□□□□ -1.06
CASC19-227ENST00000641411 TCP11X2Q5H9J9 407 aa8.46□□□□□ -1.06
CASC19-227ENST00000641411 E4F1Q66K89 784 aaPredicted RBP8.46□□□□□ -1.06
CASC19-227ENST00000641411 HAUS3Q68CZ6 603 aa8.46□□□□□ -1.06
CASC19-227ENST00000641411 KLHL10Q6JEL2 608 aa8.46□□□□□ -1.06
CASC19-227ENST00000641411 TMEM139Q8IV31 216 aa8.46□□□□□ -1.06
CASC19-227ENST00000641411 CNGA4Q8IV77 575 aa8.46□□□□□ -1.06
CASC19-227ENST00000641411 C17orf53Q8N3J3 647 aaPredicted RBP8.46□□□□□ -1.06
CASC19-227ENST00000641411 GUF1Q8N442 669 aaKnown RBP8.46□□□□□ -1.06
CASC19-227ENST00000641411 TC2NQ8N9U0 490 aa8.46□□□□□ -1.06
CASC19-227ENST00000641411 ERMNQ8TAM6 284 aa8.46□□□□□ -1.06
CASC19-227ENST00000641411 LIN7BQ9HAP6 207 aa8.46□□□□□ -1.06
CASC19-227ENST00000641411 MYOZ2Q9NPC6 264 aa8.46□□□□□ -1.06
CASC19-227ENST00000641411 RAD18Q9NS91 495 aa8.46□□□□□ -1.06
CASC19-227ENST00000641411 MAP3K20Q9NYL2 800 aaKnown RBP8.46□□□□□ -1.06
CASC19-227ENST00000641411 PCDHA12Q9UN75 941 aa8.46□□□□□ -1.06
CASC19-227ENST00000641411 MRPL11Q9Y3B7 192 aaKnown RBP8.46□□□□□ -1.06
CASC19-227ENST00000641411 PITPNM2Q9BZ72 1349 aa8.46□□□□□ -1.06
CASC19-227ENST00000641411 LGALS16A8MUM7 142 aa8.45□□□□□ -1.06
CASC19-227ENST00000641411 KCNJ18B7U540 433 aa8.45□□□□□ -1.06
CASC19-227ENST00000641411 AKR1B15C9JRZ8 316 aaPredicted RBP8.45□□□□□ -1.06
CASC19-227ENST00000641411 FZD9O00144 591 aa8.45□□□□□ -1.06
CASC19-227ENST00000641411 WDR46O15213 610 aaKnown RBP8.45□□□□□ -1.06
CASC19-227ENST00000641411 DYNC1LI2O43237 492 aaPredicted RBP8.45□□□□□ -1.06
CASC19-227ENST00000641411 ZSCAN12O43309 604 aa8.45□□□□□ -1.06
CASC19-227ENST00000641411 CTNND1O60716 968 aaKnown RBP8.45□□□□□ -1.06
CASC19-227ENST00000641411 KIF20AO95235 890 aa8.45□□□□□ -1.06
CASC19-227ENST00000641411 TPM1P09493 284 aa8.45□□□□□ -1.06
CASC19-227ENST00000641411 TNNT1P13805 278 aa8.45□□□□□ -1.06
CASC19-227ENST00000641411 ITPKAP23677 461 aa8.45□□□□□ -1.06
CASC19-227ENST00000641411 COPB1P53618 953 aaKnown RBP8.45□□□□□ -1.06
CASC19-227ENST00000641411 STX17P56962 302 aa8.45□□□□□ -1.06
CASC19-227ENST00000641411 LRRC63Q05C16 580 aa8.45□□□□□ -1.06
CASC19-227ENST00000641411 SPIRE1Q08AE8 756 aa8.45□□□□□ -1.06
CASC19-227ENST00000641411 IKQ13123 557 aaPredicted RBP8.45□□□□□ -1.06
CASC19-227ENST00000641411 KCNJ12Q14500 433 aa8.45□□□□□ -1.06
CASC19-227ENST00000641411 PTPN14Q15678 1187 aa8.45□□□□□ -1.06
CASC19-227ENST00000641411 KIAA0319Q5VV43 1072 aa8.45□□□□□ -1.06
CASC19-227ENST00000641411 CENPPQ6IPU0 288 aa8.45□□□□□ -1.06
CASC19-227ENST00000641411 OGFOD3Q6PK18 319 aa8.45□□□□□ -1.06
CASC19-227ENST00000641411 USP17L6PQ6QN14 398 aa8.45□□□□□ -1.06
CASC19-227ENST00000641411 DYMQ7RTS9 669 aa8.45□□□□□ -1.06
CASC19-227ENST00000641411 SMYD4Q8IYR2 804 aaPredicted RBP8.45□□□□□ -1.06
CASC19-227ENST00000641411 RETREG2Q8NC44 543 aa8.45□□□□□ -1.06
CASC19-227ENST00000641411 STAMQ92783 540 aa8.45□□□□□ -1.06
CASC19-227ENST00000641411 P2RX5Q93086 422 aa8.45□□□□□ -1.06
CASC19-227ENST00000641411 LENG9Q96B70 501 aa8.45□□□□□ -1.06
CASC19-227ENST00000641411 KIAA1683Q9H0B3 1180 aa8.45□□□□□ -1.06
CASC19-227ENST00000641411 ZNF576Q9H609 170 aa8.45□□□□□ -1.06
CASC19-227ENST00000641411 GDAQ9Y2T3 454 aa8.45□□□□□ -1.06
CASC19-227ENST00000641411 PARP14Q460N5 1801 aa8.45□□□□□ -1.06
CASC19-227ENST00000641411 UQCRHLA0A096LP55 91 aa8.44□□□□□ -1.06
CASC19-227ENST00000641411 FRMD3A2A2Y4 597 aa8.44□□□□□ -1.06
CASC19-227ENST00000641411 MYMKA6NI61 221 aa8.44□□□□□ -1.06
CASC19-227ENST00000641411 N4BP3O15049 544 aa8.44□□□□□ -1.06
CASC19-227ENST00000641411 MFAP3LO75121 409 aa8.44□□□□□ -1.06
CASC19-227ENST00000641411 UQCRHP07919 91 aa8.44□□□□□ -1.06
CASC19-227ENST00000641411 RPA1P27694 616 aa8.44□□□□□ -1.06
CASC19-227ENST00000641411 CCT6AP40227 531 aaKnown RBP8.44□□□□□ -1.06
CASC19-227ENST00000641411 DNM2P50570 870 aa8.44□□□□□ -1.06
CASC19-227ENST00000641411 SETQ01105 290 aaPredicted RBP8.44□□□□□ -1.06
CASC19-227ENST00000641411 FIGNQ5HY92 759 aa8.44□□□□□ -1.06
CASC19-227ENST00000641411 FAM83BQ5T0W9 1011 aa8.44□□□□□ -1.06
CASC19-227ENST00000641411 ARHGAP27Q6ZUM4 889 aa8.44□□□□□ -1.06
CASC19-227ENST00000641411 NIPA1Q7RTP0 329 aa8.44□□□□□ -1.06
CASC19-227ENST00000641411 MTERF4Q7Z6M4 381 aaKnown RBP8.44□□□□□ -1.06
CASC19-227ENST00000641411 PPFIBP1Q86W92 1011 aa8.44□□□□□ -1.06
CASC19-227ENST00000641411 IRF2BP1Q8IU81 584 aa8.44□□□□□ -1.06
CASC19-227ENST00000641411 ACER1Q8TDN7 264 aa8.44□□□□□ -1.06
CASC19-227ENST00000641411 DNAJC19Q96DA6 116 aa8.44□□□□□ -1.06
CASC19-227ENST00000641411 PPP1R13BQ96KQ4 1090 aa8.44□□□□□ -1.06
CASC19-227ENST00000641411 TEPSINQ96N21 525 aa8.44□□□□□ -1.06
CASC19-227ENST00000641411 NUP88Q99567 741 aaPredicted RBP8.44□□□□□ -1.06
CASC19-227ENST00000641411 BAG1Q99933 345 aaPredicted RBP8.44□□□□□ -1.06
CASC19-227ENST00000641411 DUSP9Q99956 384 aaKnown RBP8.44□□□□□ -1.06
CASC19-227ENST00000641411 POLR3CQ9BUI4 534 aaPredicted RBP8.44□□□□□ -1.06
CASC19-227ENST00000641411 TMEM39BQ9GZU3 492 aa8.44□□□□□ -1.06
CASC19-227ENST00000641411 VEZTQ9HBM0 779 aa8.44□□□□□ -1.06
CASC19-227ENST00000641411 MAGEC2Q9UBF1 373 aaPredicted RBP8.44□□□□□ -1.06
CASC19-227ENST00000641411 SLC5A6Q9Y289 635 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms