RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 BORCS6Q96GS4 357 aa12.73□□□□□ -0.37
RBFOX1-224ENST00000641259 SMC6Q96SB8 1091 aa12.73□□□□□ -0.37
RBFOX1-224ENST00000641259 KDM4CQ9H3R0 1056 aa12.73□□□□□ -0.37
RBFOX1-224ENST00000641259 RWDD2AQ9UIY3 292 aa12.73□□□□□ -0.37
RBFOX1-224ENST00000641259 PCDHA1Q9Y5I3 950 aa12.73□□□□□ -0.37
RBFOX1-224ENST00000641259 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.72□□□□□ -0.37
RBFOX1-224ENST00000641259 hCG_1984214I3L0E3 225 aa12.72□□□□□ -0.37
RBFOX1-224ENST00000641259 DNAJC6O75061 913 aa12.72□□□□□ -0.37
RBFOX1-224ENST00000641259 EPB41P11171 864 aaKnown RBP12.72□□□□□ -0.37
RBFOX1-224ENST00000641259 DRD4P21917 467 aa12.72□□□□□ -0.37
RBFOX1-224ENST00000641259 MRPS35P82673 323 aaKnown RBP12.72□□□□□ -0.37
RBFOX1-224ENST00000641259 NELFCDQ8IXH7 590 aa12.72□□□□□ -0.37
RBFOX1-224ENST00000641259 ZNF713Q8N859 430 aaPredicted RBP12.72□□□□□ -0.37
RBFOX1-224ENST00000641259 HIPK4Q8NE63 616 aa12.72□□□□□ -0.37
RBFOX1-224ENST00000641259 HIC2Q96JB3 615 aa12.72□□□□□ -0.37
RBFOX1-224ENST00000641259 RAB3IPQ96QF0 476 aaPredicted RBP12.72□□□□□ -0.37
RBFOX1-224ENST00000641259 NKIRAS1Q9NYS0 192 aa12.72□□□□□ -0.37
RBFOX1-224ENST00000641259 CNOT7Q9UIV1 285 aaKnown RBP12.72□□□□□ -0.37
RBFOX1-224ENST00000641259 CAPN11Q9UMQ6 739 aa12.72□□□□□ -0.37
RBFOX1-224ENST00000641259 FAM200BP0CF97 657 aa12.72□□□□□ -0.37
RBFOX1-224ENST00000641259 BMP3P12645 472 aa12.72□□□□□ -0.37
RBFOX1-224ENST00000641259 COPS2P61201 443 aa12.72□□□□□ -0.37
RBFOX1-224ENST00000641259 BTKQ06187 659 aa12.72□□□□□ -0.37
RBFOX1-224ENST00000641259 DTHD1Q6ZMT9 781 aa12.72□□□□□ -0.37
RBFOX1-224ENST00000641259 PSTPIP2Q9H939 334 aa12.72□□□□□ -0.37
RBFOX1-224ENST00000641259 HACL1Q9UJ83 578 aa12.72□□□□□ -0.37
RBFOX1-224ENST00000641259 TMX2Q9Y320 296 aa12.72□□□□□ -0.37
RBFOX1-224ENST00000641259 MEIS2O14770 477 aa12.72□□□□□ -0.37
RBFOX1-224ENST00000641259 TBC1D12O60347 775 aa12.72□□□□□ -0.37
RBFOX1-224ENST00000641259 DNAJC8O75937 253 aaPredicted RBP12.72□□□□□ -0.37
RBFOX1-224ENST00000641259 SKIP12755 728 aa12.72□□□□□ -0.37
RBFOX1-224ENST00000641259 ITGA4P13612 1032 aa12.72□□□□□ -0.37
RBFOX1-224ENST00000641259 SERPINB3P29508 390 aa12.72□□□□□ -0.37
RBFOX1-224ENST00000641259 LONP1P36776 959 aaKnown RBP12.72□□□□□ -0.37
RBFOX1-224ENST00000641259 TECP42680 631 aa12.72□□□□□ -0.37
RBFOX1-224ENST00000641259 PDE6CP51160 858 aa12.72□□□□□ -0.37
RBFOX1-224ENST00000641259 CDKAL1Q5VV42 579 aa12.72□□□□□ -0.37
RBFOX1-224ENST00000641259 TTC1Q99614 292 aa12.72□□□□□ -0.37
RBFOX1-224ENST00000641259 TLR10Q9BXR5 811 aa12.72□□□□□ -0.37
RBFOX1-224ENST00000641259 SLC5A4Q9NY91 659 aa12.72□□□□□ -0.37
RBFOX1-224ENST00000641259 TRAF5O00463 557 aa12.71□□□□□ -0.37
RBFOX1-224ENST00000641259 MAP3K13O43283 966 aa12.71□□□□□ -0.37
RBFOX1-224ENST00000641259 KRT18P05783 430 aaKnown RBP12.71□□□□□ -0.37
RBFOX1-224ENST00000641259 OR52Z1P0C646 297 aa12.71□□□□□ -0.37
RBFOX1-224ENST00000641259 CCNFP41002 786 aa12.71□□□□□ -0.37
RBFOX1-224ENST00000641259 MAP3K10Q02779 954 aa12.71□□□□□ -0.37
RBFOX1-224ENST00000641259 IKQ13123 557 aaPredicted RBP12.71□□□□□ -0.37
RBFOX1-224ENST00000641259 SYDE2Q5VT97 1194 aa12.71□□□□□ -0.37
RBFOX1-224ENST00000641259 MTMR9Q96QG7 549 aa12.71□□□□□ -0.37
RBFOX1-224ENST00000641259 NDNQ99608 321 aa12.71□□□□□ -0.37
RBFOX1-224ENST00000641259 MMTAG2Q9BU76 263 aaKnown RBP12.71□□□□□ -0.37
RBFOX1-224ENST00000641259 PRR12Q9ULL5 1215 aa12.71□□□□□ -0.37
RBFOX1-224ENST00000641259 FESP07332 822 aa12.71□□□□□ -0.38
RBFOX1-224ENST00000641259 KLRC1P26715 233 aa12.71□□□□□ -0.38
RBFOX1-224ENST00000641259 GSTT1P30711 240 aa12.71□□□□□ -0.38
RBFOX1-224ENST00000641259 MAGEA10P43363 369 aaPredicted RBP12.71□□□□□ -0.38
RBFOX1-224ENST00000641259 RASSF2P50749 326 aa12.71□□□□□ -0.38
RBFOX1-224ENST00000641259 CACNA2D1P54289 1103 aa12.71□□□□□ -0.38
RBFOX1-224ENST00000641259 TMEM62Q0P6H9 643 aa12.71□□□□□ -0.38
RBFOX1-224ENST00000641259 PPP1R18Q6NYC8 613 aa12.71□□□□□ -0.38
RBFOX1-224ENST00000641259 TTC8Q8TAM2 541 aa12.71□□□□□ -0.38
RBFOX1-224ENST00000641259 TRPM4Q8TD43 1214 aa12.71□□□□□ -0.38
RBFOX1-224ENST00000641259 EPS8L3Q8TE67 593 aaKnown RBP12.71□□□□□ -0.38
RBFOX1-224ENST00000641259 CAVIN3Q969G5 261 aa12.71□□□□□ -0.38
RBFOX1-224ENST00000641259 DCTN4Q9UJW0 460 aa12.71□□□□□ -0.38
RBFOX1-224ENST00000641259 USP15Q9Y4E8 981 aaPredicted RBP12.71□□□□□ -0.38
RBFOX1-224ENST00000641259 MYH10P35580 1976 aa12.71□□□□□ -0.38
RBFOX1-224ENST00000641259 NVLO15381 856 aaKnown RBP12.7□□□□□ -0.38
RBFOX1-224ENST00000641259 C6orf89Q6UWU4 347 aa12.7□□□□□ -0.38
RBFOX1-224ENST00000641259 SPATA24Q86W54 205 aa12.7□□□□□ -0.38
RBFOX1-224ENST00000641259 OPTNQ96CV9 577 aa12.7□□□□□ -0.38
RBFOX1-224ENST00000641259 PACSIN1Q9BY11 444 aa12.7□□□□□ -0.38
RBFOX1-224ENST00000641259 DISC1Q9NRI5 854 aa12.7□□□□□ -0.38
RBFOX1-224ENST00000641259 FBXO28Q9NVF7 368 aa12.7□□□□□ -0.38
RBFOX1-224ENST00000641259 DNAAF2Q9NVR5 837 aaKnown RBP12.7□□□□□ -0.38
RBFOX1-224ENST00000641259 NKX1-2Q9UD57 310 aaPredicted RBP12.7□□□□□ -0.38
RBFOX1-224ENST00000641259 ZNF232Q9UNY5 417 aa12.7□□□□□ -0.38
RBFOX1-224ENST00000641259 CCDC169A6NNP5 214 aa12.7□□□□□ -0.38
RBFOX1-224ENST00000641259 LONRF1Q17RB8 773 aa12.7□□□□□ -0.38
RBFOX1-224ENST00000641259 MAP7D1Q3KQU3 841 aa12.7□□□□□ -0.38
RBFOX1-224ENST00000641259 LMBRD2Q68DH5 695 aaPredicted RBP12.7□□□□□ -0.38
RBFOX1-224ENST00000641259 DLK2Q6UY11 383 aa12.7□□□□□ -0.38
RBFOX1-224ENST00000641259 GLG1Q92896 1179 aa12.7□□□□□ -0.38
RBFOX1-224ENST00000641259 LSM14BQ9BX40 385 aaKnown RBP12.7□□□□□ -0.38
RBFOX1-224ENST00000641259 DDX18Q9NVP1 670 aaKnown RBP12.7□□□□□ -0.38
RBFOX1-224ENST00000641259 ADAM22Q9P0K1 906 aa12.7□□□□□ -0.38
RBFOX1-224ENST00000641259 SALL4Q9UJQ4 1053 aa12.7□□□□□ -0.38
RBFOX1-224ENST00000641259 RASGRF2O14827 1237 aa12.7□□□□□ -0.38
RBFOX1-224ENST00000641259 ATP9AO75110 1047 aa12.7□□□□□ -0.38
RBFOX1-224ENST00000641259 FGGP02679 453 aa12.7□□□□□ -0.38
RBFOX1-224ENST00000641259 MYL1P05976 194 aa12.7□□□□□ -0.38
RBFOX1-224ENST00000641259 TXKP42681 527 aa12.7□□□□□ -0.38
RBFOX1-224ENST00000641259 NCALDP61601 193 aa12.7□□□□□ -0.38
RBFOX1-224ENST00000641259 DYNC1I2Q13409 638 aaKnown RBP12.7□□□□□ -0.38
RBFOX1-224ENST00000641259 MAP7Q14244 749 aa12.7□□□□□ -0.38
RBFOX1-224ENST00000641259 TRIP13Q15645 432 aaPredicted RBP12.7□□□□□ -0.38
RBFOX1-224ENST00000641259 NBPF12Q5TAG4 269 aaPredicted RBP12.7□□□□□ -0.38
RBFOX1-224ENST00000641259 ZNF658Q5TYW1 1059 aaPredicted RBP12.7□□□□□ -0.38
RBFOX1-224ENST00000641259 SFMBT2Q5VUG0 894 aa12.7□□□□□ -0.38
RBFOX1-224ENST00000641259 MAP7D3Q8IWC1 876 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms