RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 EXTL3O43909 919 aa18.75■□□□□ 0.59
PHGDH-208ENST00000641023 LDHAP00338 332 aaKnown RBP18.75■□□□□ 0.59
PHGDH-208ENST00000641023 FAM228BP0C875 321 aa18.75■□□□□ 0.59
PHGDH-208ENST00000641023 SOX5P35711 763 aa18.75■□□□□ 0.59
PHGDH-208ENST00000641023 DRAP1Q14919 205 aaPredicted RBP18.75■□□□□ 0.59
PHGDH-208ENST00000641023 EPC2Q52LR7 807 aa18.75■□□□□ 0.59
PHGDH-208ENST00000641023 PHLDB3Q6NSJ2 640 aa18.75■□□□□ 0.59
PHGDH-208ENST00000641023 TRIM58Q8NG06 486 aa18.75■□□□□ 0.59
PHGDH-208ENST00000641023 EMID1Q96A84 441 aaPredicted RBP18.75■□□□□ 0.59
PHGDH-208ENST00000641023 FAM213AQ9BRX8 229 aa18.75■□□□□ 0.59
PHGDH-208ENST00000641023 CARD6Q9BX69 1037 aa18.75■□□□□ 0.59
PHGDH-208ENST00000641023 CDC23Q9UJX2 597 aa18.75■□□□□ 0.59
PHGDH-208ENST00000641023 PLXNA1Q9UIW2 1896 aa18.75■□□□□ 0.59
PHGDH-208ENST00000641023 SLC15A5A6NIM6 579 aa18.75■□□□□ 0.59
PHGDH-208ENST00000641023 ZBTB42B2RXF5 422 aa18.75■□□□□ 0.59
PHGDH-208ENST00000641023 SNAI1O95863 264 aaPredicted RBP18.75■□□□□ 0.59
PHGDH-208ENST00000641023 GTF2H1P32780 548 aa18.75■□□□□ 0.59
PHGDH-208ENST00000641023 CYP24A1Q07973 514 aa18.75■□□□□ 0.59
PHGDH-208ENST00000641023 DRP2Q13474 957 aa18.75■□□□□ 0.59
PHGDH-208ENST00000641023 ZNF571Q7Z3V5 609 aaPredicted RBP18.75■□□□□ 0.59
PHGDH-208ENST00000641023 PPTC7Q8NI37 304 aa18.75■□□□□ 0.59
PHGDH-208ENST00000641023 TINF2Q9BSI4 451 aa18.75■□□□□ 0.59
PHGDH-208ENST00000641023 ABHD16BQ9H3Z7 469 aa18.75■□□□□ 0.59
PHGDH-208ENST00000641023 TMEM8AQ9HCN3 771 aa18.75■□□□□ 0.59
PHGDH-208ENST00000641023 ZCCHC17Q9NP64 241 aaKnown RBP18.75■□□□□ 0.59
PHGDH-208ENST00000641023 AGO2Q9UKV8 859 aaKnown RBP18.75■□□□□ 0.59
PHGDH-208ENST00000641023 LRRIQ3A6PVS8 624 aaPredicted RBP18.74■□□□□ 0.59
PHGDH-208ENST00000641023 TACC1O75410 805 aa18.74■□□□□ 0.59
PHGDH-208ENST00000641023 ADCYAP1R1P41586 468 aa18.74■□□□□ 0.59
PHGDH-208ENST00000641023 NCBP1Q09161 790 aaKnown RBP18.74■□□□□ 0.59
PHGDH-208ENST00000641023 RASAL3Q86YV0 1011 aa18.74■□□□□ 0.59
PHGDH-208ENST00000641023 KATNBL1Q9H079 304 aa18.74■□□□□ 0.59
PHGDH-208ENST00000641023 EVI5O60447 810 aa18.73■□□□□ 0.59
PHGDH-208ENST00000641023 GFPT2O94808 682 aa18.73■□□□□ 0.59
PHGDH-208ENST00000641023 LAMTOR4Q0VGL1 99 aa18.73■□□□□ 0.59
PHGDH-208ENST00000641023 ZBTB8OSQ8IWT0 167 aa18.73■□□□□ 0.59
PHGDH-208ENST00000641023 RNF10Q8N5U6 811 aaKnown RBP18.73■□□□□ 0.59
PHGDH-208ENST00000641023 MSL3Q8N5Y2 521 aaKnown RBP18.73■□□□□ 0.59
PHGDH-208ENST00000641023 ALS2CR12Q96Q35 445 aa18.73■□□□□ 0.59
PHGDH-208ENST00000641023 UBE2TQ9NPD8 197 aaPredicted RBP18.73■□□□□ 0.59
PHGDH-208ENST00000641023 CPA4Q9UI42 421 aa18.73■□□□□ 0.59
PHGDH-208ENST00000641023 USP20Q9Y2K6 914 aa18.73■□□□□ 0.59
PHGDH-208ENST00000641023 DCAF8L1A6NGE4 600 aa18.73■□□□□ 0.59
PHGDH-208ENST00000641023 EFCAB8A8MWE9 144 aa18.73■□□□□ 0.59
PHGDH-208ENST00000641023 PPFIA4O75335 1185 aa18.73■□□□□ 0.59
PHGDH-208ENST00000641023 LGALS2P05162 132 aa18.73■□□□□ 0.59
PHGDH-208ENST00000641023 DLATP10515 647 aaKnown RBP18.73■□□□□ 0.59
PHGDH-208ENST00000641023 MAP2K1Q02750 393 aaPredicted RBP18.73■□□□□ 0.59
PHGDH-208ENST00000641023 MKRN4PQ13434 485 aaPredicted RBP18.73■□□□□ 0.59
PHGDH-208ENST00000641023 BMS1Q14692 1282 aaKnown RBP18.73■□□□□ 0.59
PHGDH-208ENST00000641023 GJC2Q5T442 439 aaPredicted RBP18.73■□□□□ 0.59
PHGDH-208ENST00000641023 ZPBP2Q6X784 338 aa18.73■□□□□ 0.59
PHGDH-208ENST00000641023 LRRC71Q8N4P6 559 aa18.73■□□□□ 0.59
PHGDH-208ENST00000641023 TARS2Q9BW92 718 aaKnown RBP18.73■□□□□ 0.59
PHGDH-208ENST00000641023 C2orf40Q9H1Z8 148 aa18.73■□□□□ 0.59
PHGDH-208ENST00000641023 COQ4Q9Y3A0 265 aa18.73■□□□□ 0.59
PHGDH-208ENST00000641023 ANO9A1A5B4 782 aa18.72■□□□□ 0.59
PHGDH-208ENST00000641023 SRGAP2CP0DJJ0 459 aa18.72■□□□□ 0.59
PHGDH-208ENST00000641023 MATR3P43243 847 aaKnown RBP eCLIP18.72■□□□□ 0.59
PHGDH-208ENST00000641023 ACVR2BQ13705 512 aa18.72■□□□□ 0.59
PHGDH-208ENST00000641023 TAF1CQ15572 869 aaPredicted RBP18.72■□□□□ 0.59
PHGDH-208ENST00000641023 ARHGAP44Q17R89 818 aa18.72■□□□□ 0.59
PHGDH-208ENST00000641023 ZNF484Q5JVG2 852 aa18.72■□□□□ 0.59
PHGDH-208ENST00000641023 CEP112Q8N8E3 955 aa18.72■□□□□ 0.59
PHGDH-208ENST00000641023 RNF149Q8NC42 400 aa18.72■□□□□ 0.59
PHGDH-208ENST00000641023 FBXL13Q8NEE6 735 aa18.72■□□□□ 0.59
PHGDH-208ENST00000641023 UBXN4Q92575 508 aa18.72■□□□□ 0.59
PHGDH-208ENST00000641023 FNBP1Q96RU3 617 aa18.72■□□□□ 0.59
PHGDH-208ENST00000641023 POP1Q99575 1024 aaKnown RBP18.72■□□□□ 0.59
PHGDH-208ENST00000641023 RNPEPQ9H4A4 650 aa18.72■□□□□ 0.59
PHGDH-208ENST00000641023 SUCLA2Q9P2R7 463 aaPredicted RBP18.72■□□□□ 0.59
PHGDH-208ENST00000641023 IGF2BP3O00425 579 aaKnown RBP eCLIP18.72■□□□□ 0.59
PHGDH-208ENST00000641023 ASAP2O43150 1006 aa18.72■□□□□ 0.59
PHGDH-208ENST00000641023 TFDP1Q14186 410 aa18.72■□□□□ 0.59
PHGDH-208ENST00000641023 NAA30Q147X3 362 aaPredicted RBP18.72■□□□□ 0.59
PHGDH-208ENST00000641023 NAB2Q15742 525 aa18.72■□□□□ 0.59
PHGDH-208ENST00000641023 KIAA0753Q2KHM9 967 aa18.72■□□□□ 0.59
PHGDH-208ENST00000641023 DUSP28Q4G0W2 176 aa18.72■□□□□ 0.59
PHGDH-208ENST00000641023 CDCA2Q69YH5 1023 aaPredicted RBP18.72■□□□□ 0.59
PHGDH-208ENST00000641023 RGMBQ6NW40 437 aa18.72■□□□□ 0.59
PHGDH-208ENST00000641023 SAPCD2Q86UD0 394 aa18.72■□□□□ 0.59
PHGDH-208ENST00000641023 AFG1LQ8WV93 481 aa18.72■□□□□ 0.59
PHGDH-208ENST00000641023 MSTO1Q9BUK6 570 aa18.72■□□□□ 0.59
PHGDH-208ENST00000641023 MRPL4Q9BYD3 311 aaKnown RBP18.72■□□□□ 0.59
PHGDH-208ENST00000641023 GPR88Q9GZN0 384 aa18.72■□□□□ 0.59
PHGDH-208ENST00000641023 ANKFY1Q9P2R3 1169 aa18.72■□□□□ 0.59
PHGDH-208ENST00000641023 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.72■□□□□ 0.59
PHGDH-208ENST00000641023 NAGPAQ9UK23 515 aa18.72■□□□□ 0.59
PHGDH-208ENST00000641023 V9GYY5 206 aaPredicted RBP18.72■□□□□ 0.59
PHGDH-208ENST00000641023 ENC1O14682 589 aa18.71■□□□□ 0.59
PHGDH-208ENST00000641023 CLDN3O15551 220 aa18.71■□□□□ 0.59
PHGDH-208ENST00000641023 PNMA6AP0CW24 399 aaPredicted RBP18.71■□□□□ 0.59
PHGDH-208ENST00000641023 INHBEP58166 350 aa18.71■□□□□ 0.59
PHGDH-208ENST00000641023 MAPK6Q16659 721 aa18.71■□□□□ 0.59
PHGDH-208ENST00000641023 IQSEC1Q6DN90 963 aa18.71■□□□□ 0.59
PHGDH-208ENST00000641023 EFCAB12Q6NXP0 572 aa18.71■□□□□ 0.59
PHGDH-208ENST00000641023 ALKBH5Q6P6C2 394 aaKnown RBP18.71■□□□□ 0.59
PHGDH-208ENST00000641023 SV2AQ7L0J3 742 aa18.71■□□□□ 0.59
PHGDH-208ENST00000641023 RHPN2Q8IUC4 686 aa18.71■□□□□ 0.59
PHGDH-208ENST00000641023 METTL13Q8N6R0 699 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms