RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, human

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-231	ENST00000640499	PHLPP2	Q6ZVD8	1323 aa		29.4	■■■□□ 2.3
VEGFA-231	ENST00000640499		H3BNC9	293 aa		29.39	■■■□□ 2.3
VEGFA-231	ENST00000640499	NPTXR	O95502	500 aa		29.39	■■■□□ 2.3
VEGFA-231	ENST00000640499	CTNNB1	P35222	781 aa		29.39	■■■□□ 2.3
VEGFA-231	ENST00000640499	STAM	Q92783	540 aa		29.39	■■■□□ 2.3
VEGFA-231	ENST00000640499	KCNN1	Q92952	543 aa		29.39	■■■□□ 2.3
VEGFA-231	ENST00000640499	DHX58	Q96C10	678 aa		29.39	■■■□□ 2.3
VEGFA-231	ENST00000640499	GAS2L1	Q99501	681 aa	Predicted RBP	29.39	■■■□□ 2.3
VEGFA-231	ENST00000640499	GDPD2	Q9HCC8	539 aa		29.39	■■■□□ 2.3
VEGFA-231	ENST00000640499	PTPRH	Q9HD43	1115 aa		29.39	■■■□□ 2.3
VEGFA-231	ENST00000640499	KBTBD4	Q9NVX7	518 aa		29.39	■■■□□ 2.3
VEGFA-231	ENST00000640499	IGFBP4	P22692	258 aa		29.38	■■■□□ 2.29
VEGFA-231	ENST00000640499	ADAL	Q6DHV7	355 aa		29.38	■■■□□ 2.29
VEGFA-231	ENST00000640499	MYCT1	Q8N699	235 aa		29.38	■■■□□ 2.29
VEGFA-231	ENST00000640499	PGBD4	Q96DM1	585 aa		29.38	■■■□□ 2.29
VEGFA-231	ENST00000640499	ACO2	Q99798	780 aa	Known RBP	29.38	■■■□□ 2.29
VEGFA-231	ENST00000640499	PARVG	Q9HBI0	331 aa		29.38	■■■□□ 2.29
VEGFA-231	ENST00000640499	LARS	Q9P2J5	1176 aa	Known RBP	29.38	■■■□□ 2.29
VEGFA-231	ENST00000640499	PRRC2B	Q5JSZ5	2229 aa	Known RBP	29.38	■■■□□ 2.29
VEGFA-231	ENST00000640499	ABLIM1	O14639	778 aa		29.37	■■■□□ 2.29
VEGFA-231	ENST00000640499	B4GALT3	O60512	393 aa		29.37	■■■□□ 2.29
VEGFA-231	ENST00000640499	FAM13A	O94988	1023 aa		29.37	■■■□□ 2.29
VEGFA-231	ENST00000640499	KRT18	P05783	430 aa	Known RBP	29.37	■■■□□ 2.29
VEGFA-231	ENST00000640499	RB1	P06400	928 aa		29.37	■■■□□ 2.29
VEGFA-231	ENST00000640499	GPM6B	Q13491	265 aa		29.37	■■■□□ 2.29
VEGFA-231	ENST00000640499	ABI1	Q8IZP0	508 aa		29.37	■■■□□ 2.29
VEGFA-231	ENST00000640499	CNNM3	Q8NE01	707 aa		29.37	■■■□□ 2.29
VEGFA-231	ENST00000640499	TARS2	Q9BW92	718 aa	Known RBP	29.37	■■■□□ 2.29
VEGFA-231	ENST00000640499	MIOS	Q9NXC5	875 aa		29.37	■■■□□ 2.29
VEGFA-231	ENST00000640499	N4BP3	O15049	544 aa		29.36	■■■□□ 2.29
VEGFA-231	ENST00000640499	POLR2D	O15514	142 aa	Known RBP	29.36	■■■□□ 2.29
VEGFA-231	ENST00000640499	ITGA4	P13612	1032 aa		29.36	■■■□□ 2.29
VEGFA-231	ENST00000640499	ATF7IP2	Q5U623	682 aa		29.36	■■■□□ 2.29
VEGFA-231	ENST00000640499	HAUS6	Q7Z4H7	955 aa		29.36	■■■□□ 2.29
VEGFA-231	ENST00000640499	GSTCD	Q8NEC7	633 aa		29.36	■■■□□ 2.29
VEGFA-231	ENST00000640499	RSAD1	Q9HA92	442 aa		29.36	■■■□□ 2.29
VEGFA-231	ENST00000640499	TBC1D13	Q9NVG8	400 aa		29.36	■■■□□ 2.29
VEGFA-231	ENST00000640499	KCNG1	Q9UIX4	513 aa		29.36	■■■□□ 2.29
VEGFA-231	ENST00000640499	TNFSF13B	Q9Y275	285 aa		29.36	■■■□□ 2.29
VEGFA-231	ENST00000640499	RWDD3	Q9Y3V2	267 aa		29.36	■■■□□ 2.29
VEGFA-231	ENST00000640499	GRM6	O15303	877 aa		29.35	■■■□□ 2.29
VEGFA-231	ENST00000640499	INPPL1	O15357	1258 aa		29.35	■■■□□ 2.29
VEGFA-231	ENST00000640499	TRAK2	O60296	914 aa		29.35	■■■□□ 2.29
VEGFA-231	ENST00000640499	CMA1	P23946	247 aa		29.35	■■■□□ 2.29
VEGFA-231	ENST00000640499	AKAP5	P24588	427 aa		29.35	■■■□□ 2.29
VEGFA-231	ENST00000640499	NMT1	P30419	496 aa	Known RBP	29.35	■■■□□ 2.29
VEGFA-231	ENST00000640499	SMTN	P53814	917 aa		29.35	■■■□□ 2.29
VEGFA-231	ENST00000640499	CAMK1	Q14012	370 aa		29.35	■■■□□ 2.29
VEGFA-231	ENST00000640499	NOMO2	Q5JPE7	1267 aa		29.35	■■■□□ 2.29
VEGFA-231	ENST00000640499	GLB1L	Q6UWU2	654 aa		29.35	■■■□□ 2.29
VEGFA-231	ENST00000640499	LRRC43	Q8N309	656 aa		29.35	■■■□□ 2.29
VEGFA-231	ENST00000640499	IQUB	Q8NA54	791 aa		29.35	■■■□□ 2.29
VEGFA-231	ENST00000640499	KLHL23	Q8NBE8	558 aa		29.35	■■■□□ 2.29
VEGFA-231	ENST00000640499	COLGALT1	Q8NBJ5	622 aa		29.35	■■■□□ 2.29
VEGFA-231	ENST00000640499	APOL6	Q9BWW8	343 aa		29.35	■■■□□ 2.29
VEGFA-231	ENST00000640499	PLVAP	Q9BX97	442 aa		29.35	■■■□□ 2.29
VEGFA-231	ENST00000640499	SCAND2P	Q9GZW5	306 aa	Predicted RBP	29.35	■■■□□ 2.29
VEGFA-231	ENST00000640499	CXCL16	Q9H2A7	254 aa		29.35	■■■□□ 2.29
VEGFA-231	ENST00000640499	ZHX3	Q9H4I2	956 aa		29.35	■■■□□ 2.29
VEGFA-231	ENST00000640499	KCNH3	Q9ULD8	1083 aa		29.35	■■■□□ 2.29
VEGFA-231	ENST00000640499	PLAGL2	Q9UPG8	496 aa		29.35	■■■□□ 2.29
VEGFA-231	ENST00000640499	HPSE	Q9Y251	543 aa		29.35	■■■□□ 2.29
VEGFA-231	ENST00000640499	INPP5F	Q9Y2H2	1132 aa		29.35	■■■□□ 2.29
VEGFA-231	ENST00000640499	ATG2A	Q2TAZ0	1938 aa		29.34	■■■□□ 2.29
VEGFA-231	ENST00000640499	FRMD3	A2A2Y4	597 aa		29.34	■■■□□ 2.29
VEGFA-231	ENST00000640499	ITGB1	P05556	798 aa		29.34	■■■□□ 2.29
VEGFA-231	ENST00000640499	PROZ	P22891	400 aa		29.34	■■■□□ 2.29
VEGFA-231	ENST00000640499	DNAJB1	P25685	340 aa		29.34	■■■□□ 2.29
VEGFA-231	ENST00000640499	PBX3	P40426	434 aa		29.34	■■■□□ 2.29
VEGFA-231	ENST00000640499	ZNF280B	Q86YH2	543 aa		29.34	■■■□□ 2.29
VEGFA-231	ENST00000640499	P2RX5	Q93086	422 aa		29.34	■■■□□ 2.29
VEGFA-231	ENST00000640499	GAD1	Q99259	594 aa		29.34	■■■□□ 2.29
VEGFA-231	ENST00000640499	MRPL4	Q9BYD3	311 aa	Known RBP	29.34	■■■□□ 2.29
VEGFA-231	ENST00000640499	FAM13B	Q9NYF5	915 aa		29.34	■■■□□ 2.29
VEGFA-231	ENST00000640499	PRUNE2	Q8WUY3	3088 aa		29.34	■■■□□ 2.29
VEGFA-231	ENST00000640499		A0A1B0GVL5	298 aa		29.33	■■■□□ 2.29
VEGFA-231	ENST00000640499	TBCA	O75347	108 aa	Known RBP	29.33	■■■□□ 2.29
VEGFA-231	ENST00000640499	SFR1	Q86XK3	245 aa		29.33	■■■□□ 2.29
VEGFA-231	ENST00000640499	MAFA	Q8NHW3	353 aa	Predicted RBP	29.33	■■■□□ 2.29
VEGFA-231	ENST00000640499	SPPL3	Q8TCT6	385 aa		29.33	■■■□□ 2.29
VEGFA-231	ENST00000640499	ZBTB45	Q96K62	511 aa	Predicted RBP	29.33	■■■□□ 2.29
VEGFA-231	ENST00000640499	ZFP42	Q96MM3	310 aa		29.33	■■■□□ 2.29
VEGFA-231	ENST00000640499	TRIM6	Q9C030	488 aa	Predicted RBP	29.33	■■■□□ 2.29
VEGFA-231	ENST00000640499	TNMD	Q9H2S6	317 aa		29.33	■■■□□ 2.29
VEGFA-231	ENST00000640499	CUEDC2	Q9H467	287 aa		29.33	■■■□□ 2.29
VEGFA-231	ENST00000640499	NRDE2	Q9H7Z3	1164 aa		29.33	■■■□□ 2.29
VEGFA-231	ENST00000640499	ALG13	Q9NP73	1137 aa	Known RBP	29.33	■■■□□ 2.29
VEGFA-231	ENST00000640499	PLXNA4	Q9HCM2	1894 aa		29.33	■■■□□ 2.29
VEGFA-231	ENST00000640499	FAM237A	A0A1B0GTK4	181 aa		29.32	■■■□□ 2.28
VEGFA-231	ENST00000640499	ARL5C	A6NH57	179 aa		29.32	■■■□□ 2.28
VEGFA-231	ENST00000640499	DDHD2	O94830	711 aa		29.32	■■■□□ 2.28
VEGFA-231	ENST00000640499	PFKFB1	P16118	471 aa		29.32	■■■□□ 2.28
VEGFA-231	ENST00000640499	SPOUT1	Q5T280	376 aa	Known RBP	29.32	■■■□□ 2.28
VEGFA-231	ENST00000640499	C11orf84	Q9BUA3	381 aa	Predicted RBP	29.32	■■■□□ 2.28
VEGFA-231	ENST00000640499	STRA6	Q9BX79	667 aa		29.32	■■■□□ 2.28
VEGFA-231	ENST00000640499	HAPLN2	Q9GZV7	340 aa		29.32	■■■□□ 2.28
VEGFA-231	ENST00000640499	CDT1	Q9H211	546 aa		29.32	■■■□□ 2.28
VEGFA-231	ENST00000640499	SNTG2	Q9NY99	539 aa		29.32	■■■□□ 2.28
VEGFA-231	ENST00000640499	LMCD1	Q9NZU5	365 aa		29.32	■■■□□ 2.28
VEGFA-231	ENST00000640499	KLK14	Q9P0G3	267 aa		29.32	■■■□□ 2.28

Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms